Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 4
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034408.1-P | Field mustard | endoplasmic reticulum | 98.62 | 98.62 |
| CDY37102 | Canola | endoplasmic reticulum | 98.62 | 98.62 |
| AT1G35620.1 | Thale cress | endoplasmic reticulum | 85.98 | 85.0 |
| VIT_18s0075g00210.t01 | Wine grape | endoplasmic reticulum | 55.86 | 61.36 |
| KRH34995 | Soybean | endoplasmic reticulum | 57.47 | 57.74 |
| TraesCS2A01G304300.1 | Wheat | endoplasmic reticulum | 54.48 | 57.38 |
| TraesCS2B01G321000.1 | Wheat | golgi | 54.71 | 57.07 |
| HORVU2Hr1G075810.1 | Barley | endoplasmic reticulum | 54.25 | 57.0 |
| Zm00001d025131_P001 | Maize | extracellular, plasma membrane | 54.48 | 56.43 |
| EES12182 | Sorghum | endoplasmic reticulum | 54.02 | 56.22 |
| Solyc06g065320.2.1 | Tomato | endoplasmic reticulum | 56.55 | 55.66 |
| GSMUA_Achr5P17020_001 | Banana | endoplasmic reticulum, golgi, mitochondrion, plasma membrane | 57.01 | 55.61 |
| Zm00001d016786_P001 | Maize | plasma membrane | 53.33 | 55.24 |
| Os04t0432500-01 | Rice | plasma membrane | 53.56 | 55.08 |
| PGSC0003DMT400070983 | Potato | endoplasmic reticulum | 54.71 | 54.84 |
| Solyc11g019920.1.1 | Tomato | plastid, unclear | 54.71 | 54.71 |
| GSMUA_Achr3P19080_001 | Banana | endoplasmic reticulum, golgi, plasma membrane | 55.17 | 54.18 |
| Zm00001d003654_P001 | Maize | endoplasmic reticulum | 53.79 | 52.94 |
| Os02t0550300-00 | Rice | endoplasmic reticulum | 51.26 | 52.59 |
| TraesCS2D01G302900.1 | Wheat | endoplasmic reticulum | 54.25 | 52.33 |
| TraesCS6B01G261500.2 | Wheat | endoplasmic reticulum | 49.2 | 51.2 |
| TraesCS6A01G220100.1 | Wheat | golgi | 48.74 | 51.08 |
| TraesCS6D01G215100.1 | Wheat | endoplasmic reticulum | 48.74 | 50.84 |
| PGSC0003DMT400067074 | Potato | endoplasmic reticulum | 55.17 | 49.28 |
| OQU85098 | Sorghum | endoplasmic reticulum | 52.41 | 46.53 |
| HORVU6Hr1G059710.1 | Barley | endoplasmic reticulum | 47.59 | 46.21 |
| CDY08176 | Canola | endoplasmic reticulum | 25.29 | 22.09 |
| CDY00400 | Canola | endoplasmic reticulum | 25.52 | 22.02 |
| CDY01314 | Canola | endoplasmic reticulum | 25.06 | 21.98 |
| CDY04673 | Canola | endoplasmic reticulum | 25.06 | 21.89 |
| CDY38821 | Canola | cytosol, endoplasmic reticulum | 24.37 | 21.2 |
| CDX88376 | Canola | cytosol, endoplasmic reticulum | 24.6 | 20.94 |
| CDX95112 | Canola | endoplasmic reticulum | 6.9 | 20.83 |
| CDX93606 | Canola | endoplasmic reticulum | 6.9 | 20.83 |
| CDX87514 | Canola | endoplasmic reticulum | 24.37 | 20.83 |
| CDX96575 | Canola | endoplasmic reticulum | 23.91 | 20.76 |
| CDY38344 | Canola | endoplasmic reticulum | 23.68 | 20.16 |
| CDY40898 | Canola | endoplasmic reticulum | 23.45 | 20.0 |
| CDY09193 | Canola | endoplasmic reticulum | 23.68 | 17.55 |
| CDX73422 | Canola | endoplasmic reticulum | 22.76 | 17.19 |
| CDX95726 | Canola | endoplasmic reticulum | 14.25 | 17.13 |
| CDY53631 | Canola | endoplasmic reticulum | 23.45 | 17.11 |
| CDY31525 | Canola | endoplasmic reticulum | 23.45 | 17.11 |
| CDY56958 | Canola | endoplasmic reticulum | 22.53 | 16.93 |
| CDY57723 | Canola | endoplasmic reticulum | 14.02 | 16.9 |
| CDX80106 | Canola | endoplasmic reticulum | 14.02 | 16.9 |
| CDX83326 | Canola | endoplasmic reticulum | 14.02 | 16.85 |
| CDY53400 | Canola | endoplasmic reticulum | 11.72 | 15.09 |
| CDY47529 | Canola | endoplasmic reticulum | 17.01 | 14.07 |
| CDY02550 | Canola | endoplasmic reticulum | 16.78 | 13.88 |
| CDY68572 | Canola | endoplasmic reticulum | 16.09 | 13.36 |
| CDY52981 | Canola | endoplasmic reticulum | 16.09 | 13.23 |
| CDY18278 | Canola | endoplasmic reticulum | 12.18 | 12.16 |
| CDX79497 | Canola | endoplasmic reticulum | 12.18 | 11.96 |
| CDY12149 | Canola | endoplasmic reticulum | 11.95 | 11.74 |
| CDY52544 | Canola | endoplasmic reticulum | 11.95 | 11.71 |
| CDX95413 | Canola | cytosol | 5.06 | 9.21 |
| CDX79207 | Canola | cytosol | 2.3 | 8.26 |
Protein Annotations
| MapMan:18.11.1.3 | Gene3D:3.40.30.10 | GO:A0A078C8Z3 | EnsemblPlants:CDX73337 | ProteinID:CDX73337 | ProteinID:CDX73337.1 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 | GO:GO:0045454 |
| EnsemblPlantsGene:GSBRNA2T00106472001 | InterPro:IPR013766 | PFAM:PF00085 | PFAM:PF13848 | PRINTS:PR00421 | ScanProsite:PS00194 |
| PFscan:PS51352 | PANTHER:PTHR18929 | PANTHER:PTHR18929:SF137 | SUPFAM:SSF52833 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_CS | InterPro:Thioredoxin_domain | UniParc:UPI0004EE7ECF | SEG:seg | : |
Description
BnaC05g27690D
Coordinates
chrLK031798:+:1890997..1892887
Molecular Weight (calculated)
49034.7 Da
IEP (calculated)
5.242
GRAVY (calculated)
-0.155
Length
435 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSLGLTYWW ISFLALSISL SAASDDQFTI DGTVLELTDS NFESAISTFD CVFVDFYAPW CGHCKRLNPE LDAAAPILAK LKQPIIIAKL NADKYTRLAR
101: KLDIDAFPTL MLYNHGVPME YYGPRKADLL VRYLKKFVAP DVAVLESNSH VKDFVEDSGT SFPVFVGFGL NQSLISGLGR KYKKKAWFAV AKDASEDVMV
201: SYDFDKAPAL VAQHPAYNEH SVFYGPFEDG FLEEFVKQNF LPLILPINHD TLKLLKDDER KMVLTIVEDE THESMGKLIK ALRAAAHANR DLVFGYVGVE
301: QFEEFADSFH ADKKAKLPKI VVWDGDEEYE QVNGIETVSH EEDHLTQVSR FLEGYREGKT EKKRIKGPSF MGFINSMIGI RSVYIIVFLV AVIMMLRSLG
401: QIEEPARVRT AASDGQATSV LEGETSEHKP RDKED
101: KLDIDAFPTL MLYNHGVPME YYGPRKADLL VRYLKKFVAP DVAVLESNSH VKDFVEDSGT SFPVFVGFGL NQSLISGLGR KYKKKAWFAV AKDASEDVMV
201: SYDFDKAPAL VAQHPAYNEH SVFYGPFEDG FLEEFVKQNF LPLILPINHD TLKLLKDDER KMVLTIVEDE THESMGKLIK ALRAAAHANR DLVFGYVGVE
301: QFEEFADSFH ADKKAKLPKI VVWDGDEEYE QVNGIETVSH EEDHLTQVSR FLEGYREGKT EKKRIKGPSF MGFINSMIGI RSVYIIVFLV AVIMMLRSLG
401: QIEEPARVRT AASDGQATSV LEGETSEHKP RDKED
001: MRSLKLLLCW ISFLTLSISI SASSDDQFTL DGTVLELTDS NFDSAISTFD CIFVDFYAPW CGHCKRLNPE LDAAAPILAK LKQPIVIAKL NADKYSRLAR
101: KIEIDAFPTL MLYNHGVPME YYGPRKADLL VRYLKKFVAP DVAVLESDST VKEFVEDAGT FFPVFIGFGL NESIISGLGR KYKKKAWFAV SKEVSEDTMV
201: SYDFDKAPAL VANHPTYNEH SVFYGPFEDG FLEEFVKQSF LPLILPINHD TLKLLKDDER KIVLTIVEDE THESLEKLYK ALRAAAHANR DLVFGYVGVK
301: QFEEFVDSFH VDKKTNLPKI VVWDGDEEYD QVTGIETITQ EEDHLTQVSR FLEGYREGRT EKKKINGPSF MGFINSMIGI RSVYILVFLV AVIMMLRSLG
401: QVEEPTGVRT ATAVRERVDQ ATTVPEDESS EHKPSDKKED
101: KIEIDAFPTL MLYNHGVPME YYGPRKADLL VRYLKKFVAP DVAVLESDST VKEFVEDAGT FFPVFIGFGL NESIISGLGR KYKKKAWFAV SKEVSEDTMV
201: SYDFDKAPAL VANHPTYNEH SVFYGPFEDG FLEEFVKQSF LPLILPINHD TLKLLKDDER KIVLTIVEDE THESLEKLYK ALRAAAHANR DLVFGYVGVK
301: QFEEFVDSFH VDKKTNLPKI VVWDGDEEYD QVTGIETITQ EEDHLTQVSR FLEGYREGRT EKKKINGPSF MGFINSMIGI RSVYILVFLV AVIMMLRSLG
401: QVEEPTGVRT ATAVRERVDQ ATTVPEDESS EHKPSDKKED
Arabidopsis Description
PDIL5-2Protein disulfide-isomerase 5-2 [Source:UniProtKB/Swiss-Prot;Acc:Q94F09]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.