Factsheet for TraesCS2B01G321000.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

golgi: 25769308
unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G304300.1	Wheat	endoplasmic reticulum	97.6	98.55
HORVU2Hr1G075810.1	Barley	endoplasmic reticulum	95.68	96.38
TraesCS2D01G302900.1	Wheat	endoplasmic reticulum	95.92	88.69
Os04t0432500-01	Rice	plasma membrane	87.05	85.82
Zm00001d025131_P001	Maize	extracellular, plasma membrane	85.37	84.76
EES12182	Sorghum	endoplasmic reticulum	84.17	83.97
Zm00001d003654_P001	Maize	endoplasmic reticulum	83.45	78.73
TraesCS6B01G261500.2	Wheat	endoplasmic reticulum	66.91	66.75
GSMUA_Achr3P19080_001	Banana	endoplasmic reticulum, golgi, plasma membrane	62.11	58.47
GSMUA_Achr5P17020_001	Banana	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	62.35	58.3
VIT_18s0075g00210.t01	Wine grape	endoplasmic reticulum	53.72	56.57
AT1G35620.1	Thale cress	endoplasmic reticulum	58.27	55.23
CDX73337	Canola	endoplasmic reticulum	57.07	54.71
CDY37102	Canola	endoplasmic reticulum	57.07	54.71
Bra034408.1-P	Field mustard	endoplasmic reticulum	57.07	54.71
Solyc06g065320.2.1	Tomato	endoplasmic reticulum	56.59	53.39
KRH34995	Soybean	endoplasmic reticulum	54.44	52.42
Solyc11g019920.1.1	Tomato	plastid, unclear	53.96	51.72
PGSC0003DMT400070983	Potato	endoplasmic reticulum	53.48	51.38
PGSC0003DMT400067074	Potato	endoplasmic reticulum	56.12	48.05
TraesCS6B01G005700.1	Wheat	endoplasmic reticulum	15.83	23.49
TraesCS4B01G196700.2	Wheat	endoplasmic reticulum	8.15	21.79
TraesCS6B01G005600.1	Wheat	plastid	16.31	21.05
TraesCS4B01G101800.3	Wheat	golgi	21.58	17.58
TraesCS2B01G323200.1	Wheat	endoplasmic reticulum	21.82	17.57
TraesCS6B01G005100.1	Wheat	endoplasmic reticulum	16.79	17.41
TraesCS3B01G532200.1	Wheat	endoplasmic reticulum	23.98	17.01
TraesCS6B01G005500.1	Wheat	endoplasmic reticulum	23.98	16.84
TraesCS1B01G126100.1	Wheat	endoplasmic reticulum	14.63	16.62
TraesCS7B01G022800.1	Wheat	endoplasmic reticulum	19.66	14.77
TraesCS5B01G232900.1	Wheat	golgi	13.67	12.95

Protein Annotations

MapMan:18.11.1.3	Gene3D:3.40.30.10	GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0045454
InterPro:IPR013766	PFAM:PF00085	PFAM:PF13848	PRINTS:PR00421	ScanProsite:PS00194	PFscan:PS51352
PANTHER:PTHR18929	PANTHER:PTHR18929:SF137	SUPFAM:SSF52833	SignalP:SignalP-noTM	TMHMM:TMhelix	InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain	EnsemblPlantsGene:TraesCS2B01G321000	EnsemblPlants:TraesCS2B01G321000.1	TIGR:cd02961	SEG:seg

Description

No Description!

Coordinates

chr2B:-:457680919..457683479

Molecular Weight (calculated)

46624.0 Da

IEP (calculated)

4.645

GRAVY (calculated)

-0.047

Length

417 amino acids

Sequence
(BLAST)

001: MAPPPPPPPL PLLLLLLPLL LAPFSATAAA EEFPRDGKVI DLDDSNFEAA LSSIDFLFVD FYAPWCGHCK RLAPELDEAA PVLAGLSEPI MVAKVNADKY
101: RKLGSKYGVD GFPTLMLFIH GVPIEYTGSR KADLLVRNLK KFVAPDVSTL ESDSAIKSFV ENAGTSFPMF IGFGVNESLI AEYGGKYKKR AWFAVAKDFS
201: EDWMATYDFN KIPALVAVHP KYNEQSVFYG PFEGRFLEDF VRQSLLPLTV PINTETLKLL DDDDRKVVLA ILEDDSDVNS TQLVKILRSA AHANRDLVFG
301: YVGVKQWEEF VETFDVSKSS QLPKLLVWDR NEEYELVEGS EKLEEGDQAS QLSQFLEGYR AGRTIKKKVS GPSFMGFMHS LVSMNSLYIL MFVVALLGVM
401: IYFTGQDDTQ PRRVHDE

Best Arabidopsis Sequence Match ( AT1G35620.1 )
(BLAST)

001: MRSLKLLLCW ISFLTLSISI SASSDDQFTL DGTVLELTDS NFDSAISTFD CIFVDFYAPW CGHCKRLNPE LDAAAPILAK LKQPIVIAKL NADKYSRLAR
101: KIEIDAFPTL MLYNHGVPME YYGPRKADLL VRYLKKFVAP DVAVLESDST VKEFVEDAGT FFPVFIGFGL NESIISGLGR KYKKKAWFAV SKEVSEDTMV
201: SYDFDKAPAL VANHPTYNEH SVFYGPFEDG FLEEFVKQSF LPLILPINHD TLKLLKDDER KIVLTIVEDE THESLEKLYK ALRAAAHANR DLVFGYVGVK
301: QFEEFVDSFH VDKKTNLPKI VVWDGDEEYD QVTGIETITQ EEDHLTQVSR FLEGYREGRT EKKKINGPSF MGFINSMIGI RSVYILVFLV AVIMMLRSLG
401: QVEEPTGVRT ATAVRERVDQ ATTVPEDESS EHKPSDKKED

Arabidopsis Description

PDIL5-2Protein disulfide-isomerase 5-2 [Source:UniProtKB/Swiss-Prot;Acc:Q94F09]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.