Factsheet for GSMUA_Achr5P17020_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:

plastid 3
endoplasmic reticulum 3
extracellular 1
vacuole 1
plasma membrane 2
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, mitochondrion, plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	endoplasmic reticulum
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P19080_001	Banana	endoplasmic reticulum, golgi, plasma membrane	73.77	74.27
HORVU2Hr1G075810.1	Barley	endoplasmic reticulum	58.97	63.53
TraesCS2A01G304300.1	Wheat	endoplasmic reticulum	58.3	62.95
Os04t0432500-01	Rice	plasma membrane	59.42	62.65
VIT_18s0075g00210.t01	Wine grape	endoplasmic reticulum	55.38	62.37
TraesCS2B01G321000.1	Wheat	golgi	58.3	62.35
EES12182	Sorghum	endoplasmic reticulum	57.62	61.48
Zm00001d025131_P001	Maize	extracellular, plasma membrane	57.17	60.71
Zm00001d016786_P001	Maize	plasma membrane	55.83	59.29
Zm00001d003654_P001	Maize	endoplasmic reticulum	57.62	58.14
KRH34995	Soybean	endoplasmic reticulum	56.28	57.97
TraesCS2D01G302900.1	Wheat	endoplasmic reticulum	57.85	57.21
Bra034408.1-P	Field mustard	endoplasmic reticulum	55.61	57.01
CDX73337	Canola	endoplasmic reticulum	55.61	57.01
CDY37102	Canola	endoplasmic reticulum	55.61	57.01
Os02t0550300-00	Rice	endoplasmic reticulum	54.04	56.84
AT1G35620.1	Thale cress	endoplasmic reticulum	56.05	56.82
TraesCS6B01G261500.2	Wheat	endoplasmic reticulum	52.69	56.22
TraesCS6A01G220100.1	Wheat	golgi	52.24	56.14
TraesCS6D01G215100.1	Wheat	endoplasmic reticulum	52.47	56.12
Solyc06g065320.2.1	Tomato	endoplasmic reticulum	55.38	55.88
Solyc11g019920.1.1	Tomato	plastid, unclear	54.48	55.86
PGSC0003DMT400070983	Potato	endoplasmic reticulum	54.04	55.53
PGSC0003DMT400067074	Potato	endoplasmic reticulum	54.93	50.31
OQU85098	Sorghum	endoplasmic reticulum	55.16	50.2
HORVU6Hr1G059710.1	Barley	endoplasmic reticulum	50.22	50.0
GSMUA_Achr10P...	Banana	endoplasmic reticulum	7.17	21.05
GSMUA_Achr1P16970_001	Banana	endoplasmic reticulum	23.32	20.51
GSMUA_Achr8P18890_001	Banana	cytosol	20.85	20.0
GSMUA_Achr3P22070_001	Banana	endoplasmic reticulum	22.87	19.84
GSMUA_Achr11P...	Banana	endoplasmic reticulum	15.92	19.61
GSMUA_AchrUn_...	Banana	cytosol, endoplasmic reticulum	20.18	19.61
GSMUA_Achr2P02130_001	Banana	endoplasmic reticulum	15.7	19.34
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum	19.96	19.22
GSMUA_Achr10P...	Banana	endoplasmic reticulum	17.49	14.44
GSMUA_Achr7P12170_001	Banana	endoplasmic reticulum	13.68	14.15

Protein Annotations

MapMan:18.11.1.3	Gene3D:3.40.30.10	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0019725	GO:GO:0045454	EnsemblPlantsGene:GSMUA_Achr5G17020_001	EnsemblPlants:GSMUA_Achr5P17020_001
EnsemblPlants:GSMUA_Achr5T17020_001	InterPro:IPR013766	UniProt:M0SZ81	PFAM:PF00085	PFAM:PF13848	PRINTS:PR00421
ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR18929	PANTHER:PTHR18929:SF137	SUPFAM:SSF52833	SignalP:SignalP-noTM
TMHMM:TMhelix	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain	UniParc:UPI0002959D46	SEG:seg

Description

Putative Probable protein disulfide-isomerase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G17020_001]

Coordinates

chr5:+:15820153..15827208

Molecular Weight (calculated)

50316.2 Da

IEP (calculated)

4.782

GRAVY (calculated)

-0.141

Length

446 amino acids

Sequence
(BLAST)

001: MATTQPRRRI PYPPLISVCA SLWWLAAAAA AASVHEFPTD GTVVELDDAS FDRAISAFDF ILVDFYAPWC GHCKRLAPEL DKAAPVLAQL NEPIVIAKIN
101: ADKYTKLAAK YEIDGYPTMK LFMHGVPMEY TGPRNADLLV RFLQKFVAPD ISFLESDSAV QNFIDMAGAN FPMFIGFGLN ESVILELARK YKKKAWFSVA
201: KDFSEEIMVA YDFDKVPALV SLHPKYNEQS VFYGPFEGEF LEDFIRQNQL PLTVPINSET LKLVKDDERK IVLTIVEDEL DENSLKLVRI LRSAATANRD
301: LIFGYVGVKQ WGEFVDTFDI SKRSKLPKLL VWDGKEDYHI VVGSEDLDDN DQGSQISRFL EGYRDGKTIK KEMNGPSLIG FINSLVSIRT VYLIVFIVAV
401: LMVIQNFSQT EENPQFRGIQ DGAEGTDAST SHIKNRRDYQ PGNKED

Best Arabidopsis Sequence Match ( AT1G35620.1 )
(BLAST)

001: MRSLKLLLCW ISFLTLSISI SASSDDQFTL DGTVLELTDS NFDSAISTFD CIFVDFYAPW CGHCKRLNPE LDAAAPILAK LKQPIVIAKL NADKYSRLAR
101: KIEIDAFPTL MLYNHGVPME YYGPRKADLL VRYLKKFVAP DVAVLESDST VKEFVEDAGT FFPVFIGFGL NESIISGLGR KYKKKAWFAV SKEVSEDTMV
201: SYDFDKAPAL VANHPTYNEH SVFYGPFEDG FLEEFVKQSF LPLILPINHD TLKLLKDDER KIVLTIVEDE THESLEKLYK ALRAAAHANR DLVFGYVGVK
301: QFEEFVDSFH VDKKTNLPKI VVWDGDEEYD QVTGIETITQ EEDHLTQVSR FLEGYREGRT EKKKINGPSF MGFINSMIGI RSVYILVFLV AVIMMLRSLG
401: QVEEPTGVRT ATAVRERVDQ ATTVPEDESS EHKPSDKKED

Arabidopsis Description

PDIL5-2Protein disulfide-isomerase 5-2 [Source:UniProtKB/Swiss-Prot;Acc:Q94F09]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.