Factsheet for TraesCS2A01G304300.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G321000.1	Wheat	golgi	98.55	97.6
HORVU2Hr1G075810.1	Barley	endoplasmic reticulum	96.13	95.89
TraesCS2D01G302900.1	Wheat	endoplasmic reticulum	97.34	89.14
Os04t0432500-01	Rice	plasma membrane	87.41	85.34
Zm00001d025131_P001	Maize	extracellular, plasma membrane	85.23	83.81
EES12182	Sorghum	endoplasmic reticulum	84.5	83.49
Zm00001d003654_P001	Maize	endoplasmic reticulum	84.02	78.51
TraesCS6A01G220100.1	Wheat	golgi	67.8	67.47
GSMUA_Achr5P17020_001	Banana	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	62.95	58.3
GSMUA_Achr3P19080_001	Banana	endoplasmic reticulum, golgi, plasma membrane	62.47	58.24
VIT_18s0075g00210.t01	Wine grape	endoplasmic reticulum	54.0	56.31
AT1G35620.1	Thale cress	endoplasmic reticulum	58.6	55.0
Bra034408.1-P	Field mustard	endoplasmic reticulum	57.63	54.71
CDY37102	Canola	endoplasmic reticulum	57.63	54.71
CDX73337	Canola	endoplasmic reticulum	57.38	54.48
Solyc06g065320.2.1	Tomato	endoplasmic reticulum	56.42	52.71
KRH34995	Soybean	endoplasmic reticulum	54.72	52.19
Solyc11g019920.1.1	Tomato	plastid, unclear	54.0	51.26
PGSC0003DMT400070983	Potato	endoplasmic reticulum	53.51	50.92
PGSC0003DMT400067074	Potato	endoplasmic reticulum	55.93	47.43
TraesCS4A01G107900.1	Wheat	endoplasmic reticulum	7.75	21.19
TraesCS6A01G003200.1	Wheat	endoplasmic reticulum	13.56	19.05
TraesCS6A01G000600.1	Wheat	endoplasmic reticulum	24.46	17.44
TraesCS6A01G001100.1	Wheat	endoplasmic reticulum	24.46	17.35
TraesCS2A01G306500.1	Wheat	endoplasmic reticulum	21.55	17.21
TraesCS1A01G097700.1	Wheat	golgi	15.25	17.17
TraesCS4A01G214200.2	Wheat	plastid	21.31	17.09
TraesCS7A01G123900.1	Wheat	endoplasmic reticulum	19.85	15.16
TraesCS5A01G234400.1	Wheat	golgi	13.8	12.95

Protein Annotations

MapMan:18.11.1.3	Gene3D:3.40.30.10	GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0045454
InterPro:IPR013766	PFAM:PF00085	PFAM:PF13848	PRINTS:PR00421	ScanProsite:PS00194	PFscan:PS51352
PANTHER:PTHR18929	PANTHER:PTHR18929:SF137	SUPFAM:SSF52833	SignalP:SignalP-noTM	TMHMM:TMhelix	InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain	EnsemblPlantsGene:TraesCS2A01G304300	EnsemblPlants:TraesCS2A01G304300.1	TIGR:cd02961	SEG:seg

Description

No Description!

Coordinates

chr2A:-:522840329..522842991

Molecular Weight (calculated)

46295.6 Da

IEP (calculated)

4.645

GRAVY (calculated)

-0.051

Length

413 amino acids

Sequence
(BLAST)

001: MATTPPPPPL PLLLLPLLLL AAFSAAEEFP RDGKVIDLDD SNFEAALSSI DFLFVDFYAP WCGHCKRLAP ELDEAAPVLV GLSEPIMVAK VNADKYRKLG
101: SKYGVDGFPT LMLFIHGVPI EYTGSRKADL LVRNLKKFVA PDVSTLESDS AIKSFVENAG TSFPMFIGFG VNESLIAEYG GKYKKRAWFA VAKDFSEDWM
201: ATYDFNKIPA LVAVHPKYNE QSVFYGPFEG RFLEDFVRQS LLPLTVPINT ETLKLLDDDD RKVVLAILED DSDVNSTQLV KILRSAAHAN RDLVFGYVGV
301: KQWEEFVETF DVSKSSQLPK LLVWDRNEEY ELVEGSEKLE EGDQASQLSQ FLEGYRAGRT IKKKVSGPSF MGFMHSLVSM NSLYILMFVV ALLGVMMYFT
401: GQDDTQPRRV HDE

Best Arabidopsis Sequence Match ( AT1G35620.1 )
(BLAST)

001: MRSLKLLLCW ISFLTLSISI SASSDDQFTL DGTVLELTDS NFDSAISTFD CIFVDFYAPW CGHCKRLNPE LDAAAPILAK LKQPIVIAKL NADKYSRLAR
101: KIEIDAFPTL MLYNHGVPME YYGPRKADLL VRYLKKFVAP DVAVLESDST VKEFVEDAGT FFPVFIGFGL NESIISGLGR KYKKKAWFAV SKEVSEDTMV
201: SYDFDKAPAL VANHPTYNEH SVFYGPFEDG FLEEFVKQSF LPLILPINHD TLKLLKDDER KIVLTIVEDE THESLEKLYK ALRAAAHANR DLVFGYVGVK
301: QFEEFVDSFH VDKKTNLPKI VVWDGDEEYD QVTGIETITQ EEDHLTQVSR FLEGYREGRT EKKKINGPSF MGFINSMIGI RSVYILVFLV AVIMMLRSLG
401: QVEEPTGVRT ATAVRERVDQ ATTVPEDESS EHKPSDKKED

Arabidopsis Description

PDIL5-2Protein disulfide-isomerase 5-2 [Source:UniProtKB/Swiss-Prot;Acc:Q94F09]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.