Factsheet for VIT_18s0075g00210.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 1
endoplasmic reticulum 7
extracellular 5
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g019920.1.1	Tomato	plastid, unclear	62.88	57.24
PGSC0003DMT400070983	Potato	endoplasmic reticulum	62.12	56.68
CDX73337	Canola	endoplasmic reticulum	61.36	55.86
Bra034408.1-P	Field mustard	endoplasmic reticulum	61.11	55.63
CDY37102	Canola	endoplasmic reticulum	61.11	55.63
AT1G35620.1	Thale cress	endoplasmic reticulum	61.62	55.45
GSMUA_Achr5P17020_001	Banana	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	62.37	55.38
Solyc06g065320.2.1	Tomato	endoplasmic reticulum	61.11	54.75
KRH34995	Soybean	endoplasmic reticulum	59.09	54.04
TraesCS2A01G304300.1	Wheat	endoplasmic reticulum	56.31	54.0
TraesCS2B01G321000.1	Wheat	golgi	56.57	53.72
Os04t0432500-01	Rice	plasma membrane	57.07	53.43
HORVU2Hr1G075810.1	Barley	endoplasmic reticulum	55.81	53.38
EES12182	Sorghum	endoplasmic reticulum	56.31	53.35
Zm00001d025131_P001	Maize	extracellular, plasma membrane	56.57	53.33
GSMUA_Achr3P19080_001	Banana	endoplasmic reticulum, golgi, plasma membrane	59.6	53.27
Zm00001d016786_P001	Maize	plasma membrane	55.56	52.38
Os02t0550300-00	Rice	endoplasmic reticulum	54.55	50.94
Zm00001d003654_P001	Maize	endoplasmic reticulum	56.57	50.68
TraesCS6A01G220100.1	Wheat	golgi	53.03	50.6
TraesCS6D01G215100.1	Wheat	endoplasmic reticulum	53.03	50.36
TraesCS6B01G261500.2	Wheat	endoplasmic reticulum	52.78	50.0
TraesCS2D01G302900.1	Wheat	endoplasmic reticulum	56.06	49.22
PGSC0003DMT400067074	Potato	endoplasmic reticulum	60.1	48.87
HORVU6Hr1G059710.1	Barley	endoplasmic reticulum	52.78	46.65
OQU85098	Sorghum	endoplasmic reticulum	54.8	44.29
VIT_06s0004g03250.t01	Wine grape	endoplasmic reticulum	7.32	19.59
VIT_18s0001g02510.t01	Wine grape	endoplasmic reticulum	24.24	19.24
VIT_07s0031g02660.t01	Wine grape	endoplasmic reticulum	23.99	19.0
VIT_13s0019g04240.t01	Wine grape	endoplasmic reticulum	24.24	17.11
VIT_06s0004g02890.t01	Wine grape	endoplasmic reticulum	24.75	16.98
VIT_09s0002g04250.t01	Wine grape	endoplasmic reticulum	18.43	13.59
VIT_12s0059g01560.t01	Wine grape	endoplasmic reticulum	13.64	12.47

Protein Annotations

EntrezGene:100251498	wikigene:100251498	MapMan:18.11.1.3	Gene3D:3.40.30.10	ProteinID:CBI18268	ProteinID:CBI18268.3
UniProt:D7SRI7	EMBL:FN594970	GO:GO:0003674	GO:GO:0003756	GO:GO:0003824	GO:GO:0005575
GO:GO:0005618	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774
GO:GO:0005783	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009505	GO:GO:0009506
GO:GO:0009987	GO:GO:0016020	GO:GO:0019725	GO:GO:0030312	GO:GO:0034976	GO:GO:0045454
InterPro:IPR013766	EntrezGene:LOC100251498	wikigene:LOC100251498	PFAM:PF00085	PFAM:PF13848	PRINTS:PR00421
ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR18929	PANTHER:PTHR18929:SF137	SUPFAM:SSF52833	SignalP:SignalP-noTM
TMHMM:TMhelix	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain	UniParc:UPI0001BE16A3	ArrayExpress:VIT_18s0075g00210
EnsemblPlantsGene:VIT_18s0075g00210	EnsemblPlants:VIT_18s0075g00210.t01	RefSeq:XP_002269656	RefSeq:XP_002269656.1	SEG:seg	:

Description

No Description!

Coordinates

chr18:+:21443310..21459347

Molecular Weight (calculated)

44471.7 Da

IEP (calculated)

6.016

GRAVY (calculated)

0.023

Length

396 amino acids

Sequence
(BLAST)

001: MEGRLSVMGV GVATLSIFAL LFSSVSSHDF PTDGTVLELH DSNFDSAISA FDFILVDFYA PWCGHCKRLA PELDAAAPVL ASLKEPIVIA KVNADKFTRL
101: AVKYDIDGFP TLKLFIRGVP MDYYGPRKAD LLVRFLKKFV APDVSVLVSD SAISSFVEAA GTHFPIYIGF GLNESMISNL AIKYKKKAWF SVAKDFSEDV
201: MVAYDFDKVP ALVSLHPSYN EHSVFYGPFD GEFLEDFMKQ TLFPLVLPIN YDTLKLLKDD DRKIFLTFVD DELDEKSKKL INLLKAAASA NRDLVFGFVG
301: IKQWGEFADS FGANKKTKLP KMVVWDGDNQ YFEVIGSESF DEIDQGSQIT RFIEGYKEGR TVEKKIGGPS NIGPETRKIK MRLLSIRIWR RMVCNL

Best Arabidopsis Sequence Match ( AT1G35620.1 )
(BLAST)

001: MRSLKLLLCW ISFLTLSISI SASSDDQFTL DGTVLELTDS NFDSAISTFD CIFVDFYAPW CGHCKRLNPE LDAAAPILAK LKQPIVIAKL NADKYSRLAR
101: KIEIDAFPTL MLYNHGVPME YYGPRKADLL VRYLKKFVAP DVAVLESDST VKEFVEDAGT FFPVFIGFGL NESIISGLGR KYKKKAWFAV SKEVSEDTMV
201: SYDFDKAPAL VANHPTYNEH SVFYGPFEDG FLEEFVKQSF LPLILPINHD TLKLLKDDER KIVLTIVEDE THESLEKLYK ALRAAAHANR DLVFGYVGVK
301: QFEEFVDSFH VDKKTNLPKI VVWDGDEEYD QVTGIETITQ EEDHLTQVSR FLEGYREGRT EKKKINGPSF MGFINSMIGI RSVYILVFLV AVIMMLRSLG
401: QVEEPTGVRT ATAVRERVDQ ATTVPEDESS EHKPSDKKED

Arabidopsis Description

PDIL5-2Protein disulfide-isomerase 5-2 [Source:UniProtKB/Swiss-Prot;Acc:Q94F09]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.