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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 8
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum 59.0 71.49
GSMUA_Achr8P18890_001 Banana cytosol 59.18 71.4
VIT_06s0004g02890.t01 Wine grape endoplasmic reticulum 69.16 67.24
CDY53631 Canola endoplasmic reticulum 62.92 59.23
CDY31525 Canola endoplasmic reticulum 62.92 59.23
Bra002464.1-P Field mustard endoplasmic reticulum 62.92 59.23
CDY09193 Canola endoplasmic reticulum 61.85 59.11
Bra020239.1-P Field mustard endoplasmic reticulum 61.32 58.5
AT5G60640.1 Thale cress endoplasmic reticulum 62.21 58.46
CDY56958 Canola endoplasmic reticulum 60.25 58.38
Bra007120.1-P Field mustard endoplasmic reticulum 59.89 58.03
CDX73422 Canola endoplasmic reticulum 59.54 57.99
AT3G54960.1 Thale cress endoplasmic reticulum 59.18 57.34
Os02t0100100-01 Rice plasma membrane 56.86 56.66
EES06089 Sorghum endoplasmic reticulum 57.75 56.64
Zm00001d014912_P003 Maize extracellular, plasma membrane 55.62 55.62
Zm00001d054106_P003 Maize endoplasmic reticulum 56.51 55.52
TraesCS6D01G004700.1 Wheat endoplasmic reticulum 56.33 53.83
TraesCS6A01G001100.1 Wheat endoplasmic reticulum 55.79 53.78
TraesCS6A01G000600.1 Wheat endoplasmic reticulum 55.44 53.71
TraesCS6D01G005200.1 Wheat golgi 55.79 53.23
TraesCS3B01G532200.1 Wheat endoplasmic reticulum 55.79 53.23
TraesCS6B01G005500.1 Wheat endoplasmic reticulum 54.55 51.52
HORVU6Hr1G001700.1 Barley endoplasmic reticulum, plastid 55.79 49.29
TraesCS6B01G005100.1 Wheat endoplasmic reticulum 25.85 36.07
VIT_07s0031g02660.t01 Wine grape endoplasmic reticulum 27.27 30.6
VIT_18s0001g02510.t01 Wine grape endoplasmic reticulum 26.74 30.06
VIT_09s0002g04250.t01 Wine grape endoplasmic reticulum 28.52 29.8
VIT_06s0004g03250.t01 Wine grape endoplasmic reticulum 6.42 24.32
VIT_18s0075g00210.t01 Wine grape endoplasmic reticulum 17.11 24.24
VIT_12s0059g01560.t01 Wine grape endoplasmic reticulum 16.04 20.79
Protein Annotations
EntrezGene:100256415wikigene:100256415Gene3D:3.40.30.10MapMan:50.5.3EMBL:AM430621ProteinID:CAN82379
ProteinID:CAN82379.1ProteinID:CCB56189ProteinID:CCB56189.1UniProt:F6HNH0EMBL:FN595998GO:GO:0003674
GO:GO:0003756GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005783GO:GO:0006457GO:GO:0006950GO:GO:0008150GO:GO:0009987GO:GO:0016853
GO:GO:0019725GO:GO:0034976GO:GO:0045454InterPro:IPR013766EntrezGene:LOC100256415wikigene:LOC100256415
PFAM:PF00085PFAM:PF13848PRINTS:PR00421ScanProsite:PS00194PFscan:PS51352PANTHER:PTHR18929
PANTHER:PTHR18929:SF121InterPro:Prot_disulphide_isomeraseSUPFAM:SSF52833SignalP:SignalP-noTMTIGR:TC61635TIGRFAMs:TIGR01130
TMHMM:TMhelixInterPro:Thioredoxin-like_sfInterPro:Thioredoxin_CSInterPro:Thioredoxin_domainUniParc:UPI00019848D2ArrayExpress:VIT_13s0019g04240
EnsemblPlantsGene:VIT_13s0019g04240EnsemblPlants:VIT_13s0019g04240.t01unigene:Vvi.846RefSeq:XP_002275017RefSeq:XP_002275017.1SEG:seg
Description
No Description!
Coordinates
chr13:-:5559175..5571381
Molecular Weight (calculated)
62146.3 Da
IEP (calculated)
4.476
GRAVY (calculated)
-0.335
Length
561 amino acids
Sequence
(BLAST)
001: MAGRVVMILS ILILLPFVAF SLSKADEPED LTLLQSQDQN DVVSPPPDPN RFNGGGGGDD DDLSDSDGAG GDDDSDREVV DEKDVVVLKE ANFSEFLERN
101: PYVMVEFYAP WCGHCKALAP EYAEAATELK GEAVLAKVDG TEESGLMDKY EVQGFPTLYF YADGVHKAYS GLRTKDAIVA WVKKKMESGI HNITTTVEAE
201: SILTTESKIV LGFLDSLEGP ESQELAAASR LEDDVNFYQT ASPEVAKLFH IDQQVKRPAL VLLKKEAEKL SHFDGQFIKS AIAEFVFANK HPLVIIFTKE
301: SSRQIFENPI KKQLLLFATS KDSENVLPQF QEAAKAFKGK LIFVYVEMDN KDGKSVADYF GVTGDAPRVL AYTGNDDAKK YVLDGELTLT SIKSFGEDFL
401: EDKLKRFYKS DPIPETNDGD VKIVVGDNFD ELVLDESKDV LLEIYDPSCG YCQALEPTYN KLAKYLRGID SLVIAKMDGT KNEHPRAKTD GFPTILFFPA
501: GNKSFDPITF DGDRTLVAFY KFLKKYASIP FKLKKPASYQ SSKGAEAKDG NESNNSVKDE L
Best Arabidopsis Sequence Match ( AT3G54960.1 )
(BLAST)
001: MASSSTSISL LLFVSFILLL VNSRAENASS GSDLDEELAF LAAEESKEQS HGGGSYHEEE HDHQHRDFEN YDDLEQGGGE FHHGDHGYEE EPLPPVDEKD
101: VAVLTKDNFT EFVGNNSFAM VEFYAPWCGA CQALTPEYAA AATELKGLAA LAKIDATEEG DLAQKYEIQG FPTVFLFVDG EMRKTYEGER TKDGIVTWLK
201: KKASPSIHNI TTKEEAERVL SAEPKLVFGF LNSLVGSESE ELAAASRLED DLSFYQTASP DIAKLFEIET QVKRPALVLL KKEEEKLARF DGNFTKTAIA
301: EFVSANKVPL VINFTREGAS LIFESSVKNQ LILFAKANES EKHLPTLREV AKSFKGKFVF VYVQMDNEDY GEAVSGFFGV TGAAPKVLVY TGNEDMRKFI
401: LDGELTVNNI KTLAEDFLAD KLKPFYKSDP LPENNDGDVK VIVGNNFDEI VLDESKDVLL EIYAPWCGHC QSFEPIYNKL GKYLKGIDSL VVAKMDGTSN
501: EHPRAKADGF PTILFFPGGN KSFDPIAVDV DRTVVELYKF LKKHASIPFK LEKPATPEPV ISTMKSDEKI EGDSSKDEL
Arabidopsis Description
PDIL1-3PDIL1-3 [Source:UniProtKB/TrEMBL;Acc:A0A178VF09]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.