Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 1
- endoplasmic reticulum 4
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G005700.1 | Wheat | endoplasmic reticulum | 38.31 | 54.8 |
| TraesCS6B01G005600.1 | Wheat | plastid | 41.04 | 51.08 |
| TraesCS3B01G532200.1 | Wheat | endoplasmic reticulum | 70.65 | 48.3 |
| TraesCS6B01G005500.1 | Wheat | endoplasmic reticulum | 69.65 | 47.14 |
| HORVU6Hr1G001700.1 | Barley | endoplasmic reticulum, plastid | 71.14 | 45.04 |
| Zm00001d014912_P003 | Maize | extracellular, plasma membrane | 48.01 | 34.4 |
| EES06089 | Sorghum | endoplasmic reticulum | 48.76 | 34.27 |
| Zm00001d054106_P003 | Maize | endoplasmic reticulum | 48.26 | 33.98 |
| Os02t0100100-01 | Rice | plasma membrane | 47.26 | 33.75 |
| KRH22896 | Soybean | endoplasmic reticulum | 39.3 | 28.32 |
| KRH29922 | Soybean | endoplasmic reticulum | 39.55 | 27.13 |
| KRH24870 | Soybean | endoplasmic reticulum | 39.05 | 27.12 |
| CDY56958 | Canola | endoplasmic reticulum | 38.56 | 26.77 |
| PGSC0003DMT400033517 | Potato | endoplasmic reticulum, mitochondrion | 37.31 | 26.64 |
| VIT_06s0004g02890.t01 | Wine grape | endoplasmic reticulum | 38.06 | 26.52 |
| GSMUA_AchrUn_... | Banana | cytosol, endoplasmic reticulum | 30.1 | 26.36 |
| AT5G60640.1 | Thale cress | endoplasmic reticulum | 39.05 | 26.3 |
| Solyc04g049450.2.1 | Tomato | endoplasmic reticulum, nucleus, plastid | 36.82 | 26.29 |
| Bra007120.1-P | Field mustard | endoplasmic reticulum | 37.81 | 26.25 |
| CDX73422 | Canola | endoplasmic reticulum | 37.56 | 26.22 |
| CDY53631 | Canola | endoplasmic reticulum | 38.81 | 26.17 |
| Bra002464.1-P | Field mustard | endoplasmic reticulum | 38.81 | 26.17 |
| PGSC0003DMT400020867 | Potato | endoplasmic reticulum | 37.31 | 25.91 |
| VIT_13s0019g04240.t01 | Wine grape | endoplasmic reticulum | 36.07 | 25.85 |
| CDY31525 | Canola | endoplasmic reticulum | 38.31 | 25.84 |
| Solyc11g069400.1.1 | Tomato | plastid | 37.06 | 25.69 |
| KRH26418 | Soybean | endoplasmic reticulum | 38.31 | 25.58 |
| CDY09193 | Canola | endoplasmic reticulum | 37.31 | 25.55 |
| Bra020239.1-P | Field mustard | endoplasmic reticulum | 37.31 | 25.51 |
| AT3G54960.1 | Thale cress | endoplasmic reticulum | 36.07 | 25.04 |
| Solyc06g075210.2.1 | Tomato | unclear | 31.09 | 22.77 |
| PGSC0003DMT400008689 | Potato | endoplasmic reticulum | 31.09 | 22.6 |
| TraesCS4B01G196700.2 | Wheat | endoplasmic reticulum | 8.71 | 22.44 |
| TraesCS4B01G101800.3 | Wheat | golgi | 22.14 | 17.38 |
| TraesCS2B01G321000.1 | Wheat | golgi | 17.41 | 16.79 |
| TraesCS7B01G022800.1 | Wheat | endoplasmic reticulum | 22.64 | 16.4 |
| TraesCS1B01G126100.1 | Wheat | endoplasmic reticulum | 14.93 | 16.35 |
| TraesCS2B01G323200.1 | Wheat | endoplasmic reticulum | 20.65 | 16.02 |
| TraesCS6B01G261500.2 | Wheat | endoplasmic reticulum | 15.92 | 15.31 |
| TraesCS5B01G232900.1 | Wheat | golgi | 15.92 | 14.55 |
Protein Annotations
| Gene3D:3.40.30.10 | MapMan:50.5.3 | InterPro:Disulphide_isomerase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016853 | GO:GO:0019725 | GO:GO:0045454 | InterPro:IPR013766 | PFAM:PF00085 |
| PRINTS:PR00421 | ScanProsite:PS00194 | PFscan:PS51352 | PANTHER:PTHR18929 | PANTHER:PTHR18929:SF121 | SUPFAM:SSF52833 |
| TIGRFAMs:TIGR01126 | TMHMM:TMhelix | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_CS | InterPro:Thioredoxin_domain | EnsemblPlantsGene:TraesCS6B01G005100 |
| EnsemblPlants:TraesCS6B01G005100.1 | TIGR:cd02961 | TIGR:cd02981 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr6B:+:3878974..3881056
Molecular Weight (calculated)
43762.3 Da
IEP (calculated)
4.587
GRAVY (calculated)
-0.349
Length
402 amino acids
Sequence
(BLAST)
(BLAST)
001: MYVLDSLLKK MESWQVQPAD PTPTSPHALP RSHAPRPPAM AAMPMPTPRS LLLLLLLATP FLLLPLAASA AAPTSNPDID LEYLIKNAGL DDDAPSTPDD
101: DPEDGATDFP GLDADYDEED LFGDDDGPEE SSHSHPSAAD EAHVLLLTAA NFTAVLAARR HVMVEFYAPW CGHCRALAPH YAAAATHLAE QGVDVALAKV
201: DATEEHELAQ AHGVQGYPTL LFFIDGVPRD YAGERTKDAI VAWIGKKLGP AVQNLTTVDE AEKVVTGDDV AVLAYLDHLS GVHSNELAAA SRLEDTVSFY
301: QTTSPDLAKL FHIDPEAKRP SVVLLKKEEE KLTVFDNFRG GPDSGRDVQV PQEACRHPFQ AQAPGLVSGT DRQRRGPRLD HRQREELRLE PEGRVVGDYL
401: RH
101: DPEDGATDFP GLDADYDEED LFGDDDGPEE SSHSHPSAAD EAHVLLLTAA NFTAVLAARR HVMVEFYAPW CGHCRALAPH YAAAATHLAE QGVDVALAKV
201: DATEEHELAQ AHGVQGYPTL LFFIDGVPRD YAGERTKDAI VAWIGKKLGP AVQNLTTVDE AEKVVTGDDV AVLAYLDHLS GVHSNELAAA SRLEDTVSFY
301: QTTSPDLAKL FHIDPEAKRP SVVLLKKEEE KLTVFDNFRG GPDSGRDVQV PQEACRHPFQ AQAPGLVSGT DRQRRGPRLD HRQREELRLE PEGRVVGDYL
401: RH
001: MASSSTSISL LLFVSFILLL VNSRAENASS GSDLDEELAF LAAEESKEQS HGGGSYHEEE HDHQHRDFEN YDDLEQGGGE FHHGDHGYEE EPLPPVDEKD
101: VAVLTKDNFT EFVGNNSFAM VEFYAPWCGA CQALTPEYAA AATELKGLAA LAKIDATEEG DLAQKYEIQG FPTVFLFVDG EMRKTYEGER TKDGIVTWLK
201: KKASPSIHNI TTKEEAERVL SAEPKLVFGF LNSLVGSESE ELAAASRLED DLSFYQTASP DIAKLFEIET QVKRPALVLL KKEEEKLARF DGNFTKTAIA
301: EFVSANKVPL VINFTREGAS LIFESSVKNQ LILFAKANES EKHLPTLREV AKSFKGKFVF VYVQMDNEDY GEAVSGFFGV TGAAPKVLVY TGNEDMRKFI
401: LDGELTVNNI KTLAEDFLAD KLKPFYKSDP LPENNDGDVK VIVGNNFDEI VLDESKDVLL EIYAPWCGHC QSFEPIYNKL GKYLKGIDSL VVAKMDGTSN
501: EHPRAKADGF PTILFFPGGN KSFDPIAVDV DRTVVELYKF LKKHASIPFK LEKPATPEPV ISTMKSDEKI EGDSSKDEL
101: VAVLTKDNFT EFVGNNSFAM VEFYAPWCGA CQALTPEYAA AATELKGLAA LAKIDATEEG DLAQKYEIQG FPTVFLFVDG EMRKTYEGER TKDGIVTWLK
201: KKASPSIHNI TTKEEAERVL SAEPKLVFGF LNSLVGSESE ELAAASRLED DLSFYQTASP DIAKLFEIET QVKRPALVLL KKEEEKLARF DGNFTKTAIA
301: EFVSANKVPL VINFTREGAS LIFESSVKNQ LILFAKANES EKHLPTLREV AKSFKGKFVF VYVQMDNEDY GEAVSGFFGV TGAAPKVLVY TGNEDMRKFI
401: LDGELTVNNI KTLAEDFLAD KLKPFYKSDP LPENNDGDVK VIVGNNFDEI VLDESKDVLL EIYAPWCGHC QSFEPIYNKL GKYLKGIDSL VVAKMDGTSN
501: EHPRAKADGF PTILFFPGGN KSFDPIAVDV DRTVVELYKF LKKHASIPFK LEKPATPEPV ISTMKSDEKI EGDSSKDEL
Arabidopsis Description
PDIL1-3PDIL1-3 [Source:UniProtKB/TrEMBL;Acc:A0A178VF09]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.