Skip to main content
crop-pal logo
Rice
Search for another protein from :
Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 8
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
  • nucleus 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:cytosol, nucleus, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:endoplasmic reticulum
 cytosol: 19685898
plasma membrane: 27800704
plastid: 27992503
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 19685898 doi
KA Doroshenk, AJ Crofts, RT Morris, JJ Wyrick, TW Okita
Institute of Biological Chemistry, Washington State University, Pullman, Washington 99164-6340, USA.
msms PMID: 27992503 doi
S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES06089 Sorghum endoplasmic reticulum 77.26 76.05
Zm00001d054106_P003 Maize endoplasmic reticulum 76.91 75.83
Zm00001d014912_P003 Maize extracellular, plasma membrane 74.42 74.69
TraesCS6A01G000600.1 Wheat endoplasmic reticulum 74.07 72.02
TraesCS6A01G001100.1 Wheat endoplasmic reticulum 73.71 71.31
TraesCS6D01G004700.1 Wheat endoplasmic reticulum 74.07 71.04
TraesCS6D01G005200.1 Wheat golgi 73.89 70.75
TraesCS3B01G532200.1 Wheat endoplasmic reticulum 73.53 70.41
TraesCS6B01G005500.1 Wheat endoplasmic reticulum 71.4 67.68
HORVU6Hr1G001700.1 Barley endoplasmic reticulum, plastid 73.53 65.2
GSMUA_AchrUn_... Banana cytosol, endoplasmic reticulum 50.98 62.53
KRH22896 Soybean endoplasmic reticulum 59.68 60.22
VIT_06s0004g02890.t01 Wine grape endoplasmic reticulum 59.15 57.71
KRH24870 Soybean endoplasmic reticulum 59.15 57.51
PGSC0003DMT400033517 Potato endoplasmic reticulum, mitochondrion 57.37 57.37
Solyc04g049450.2.1 Tomato endoplasmic reticulum, nucleus, plastid 57.19 57.19
VIT_13s0019g04240.t01 Wine grape endoplasmic reticulum 56.66 56.86
KRH29922 Soybean endoplasmic reticulum 59.15 56.83
KRH26418 Soybean endoplasmic reticulum 58.97 55.15
Solyc11g069400.1.1 Tomato plastid 55.95 54.31
CDY56958 Canola endoplasmic reticulum 55.77 54.23
PGSC0003DMT400020867 Potato endoplasmic reticulum 55.59 54.06
CDX73422 Canola endoplasmic reticulum 55.24 53.99
Bra007120.1-P Field mustard endoplasmic reticulum 55.42 53.89
AT3G54960.1 Thale cress endoplasmic reticulum 55.06 53.54
CDY31525 Canola endoplasmic reticulum 56.31 53.19
Bra002464.1-P Field mustard endoplasmic reticulum 56.31 53.19
AT5G60640.1 Thale cress endoplasmic reticulum 56.31 53.1
CDY53631 Canola endoplasmic reticulum 56.13 53.02
CDY09193 Canola endoplasmic reticulum 53.46 51.28
PGSC0003DMT400008689 Potato endoplasmic reticulum 50.27 51.18
Bra020239.1-P Field mustard endoplasmic reticulum 52.93 50.68
Solyc06g075210.2.1 Tomato unclear 48.85 50.09
TraesCS6B01G005100.1 Wheat endoplasmic reticulum 33.75 47.26
Os11t0199200-01 Rice extracellular, plasma membrane 27.18 29.88
Os06t0163400-01 Rice plasma membrane 27.71 29.27
Os02t0554900-01 Rice plastid 26.82 27.71
Os04t0436300-01 Rice endoplasmic reticulum 13.32 25.6
Os01t0339900-01 Rice plasma membrane 16.7 25.34
Os05t0156300-01 Rice plasma membrane 16.16 24.8
Os04t0432500-01 Rice plasma membrane 18.29 24.35
Os02t0550300-00 Rice endoplasmic reticulum 17.58 23.35
Os03t0287900-01 Rice endoplasmic reticulum 6.04 23.13
Os09t0451500-02 Rice plasma membrane 16.87 21.54
Protein Annotations
Gene3D:3.40.30.10EntrezGene:4327971MapMan:50.5.3EMBL:AK071514ProteinID:BAD38565.1ProteinID:BAF07493.1
ProteinID:BAS76496.1InterPro:Disulphide_isomeraseProteinID:EEE56114.1GO:GO:0003674GO:GO:0003756GO:GO:0003824
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005788
GO:GO:0006457GO:GO:0006950GO:GO:0008150GO:GO:0009987GO:GO:0016853GO:GO:0019725
GO:GO:0034976GO:GO:0045454InterPro:IPR013766EnsemblPlantsGene:Os02g0100100EnsemblPlants:Os02t0100100-01PFAM:PF00085
PFAM:PF13848PRINTS:PR00421ScanProsite:PS00194PFscan:PS51352PANTHER:PTHR18929PANTHER:PTHR18929:SF121
InterPro:Prot_disulphide_isomeraseUniProt:Q67IX6SUPFAM:SSF52833SignalP:SignalP-noTMTIGRFAMs:TIGR01126TIGRFAMs:TIGR01130
InterPro:Thioredoxin-like_sfInterPro:Thioredoxin_CSInterPro:Thioredoxin_domainUniParc:UPI00004265B4RefSeq:XP_015627045.1SEG:seg
Description
PROTEIN DISULFIDE ISOMERASE-LIKE 1;4, protein disulfide-isomerase 1-4, protein disulfide isomerase 1-4, PDI-like protein 1-4Thioredoxin domain domain containing protein. (Os02t0100100-01)
Coordinates
chr2:-:3634..8377
Molecular Weight (calculated)
62256.0 Da
IEP (calculated)
4.528
GRAVY (calculated)
-0.319
Length
563 amino acids
Sequence
(BLAST)
001: MRSRSLLLVA LATLLLHASA SASDDDLDYL IDNADDIPAN DPDGWLQEGS PDDDDDDDLF HHGQAQDHPI DETHVFLLSA ANFSDFLASH RHVMVEFYAP
101: WCAHCQALAP DYAAAAADLS PLAHQVALAK VDATEDTDLA QKYDVQGFPT ILFFIDGVPK DYNGARTKEA IVSWVNKKLA PGVQNITTVD EAEKILTGED
201: KAILAVLDSL SGAHSDEIAA ASRLEDAINF YQTSNPDVAK LFHLDPAAKR PSLVLLKKQE EEKLTFYDGP FKASAIADFV SANKLPLVNT LTQETAPSIF
301: DNPIKKQILL FVVANESSKF LPIFKEASKS FKGKLLFVFV ERDNEEVGEP VANYFGITGQ ETTVLAYTGN EDARNFFLDG EISVENIKRF AEDFLEEKLT
401: PFYKSEPVPE SNEGDVKIVV GKNLDQIVLD ESKDALLEIY APWCGHCQEL EPTYNKLGKH LRGIDSLVIA KMDGTANEHP RAKPDGFPTI LFYPAGKKSF
501: EPITFEGDRT VVEMYKFIKK HASIPFKLKR PDSSATKTEK DQSTASTNLR GERSSGTNFK DEL
Best Arabidopsis Sequence Match ( AT5G60640.1 )
(BLAST)
001: MAFRVLLLFS LTALLIFSAV SPSFAASSSD DVDDEDLSFL EDLKEDDVPG ADSLSSSTGF DEFEGGEEED PDMYNDDDDE EGDFSDLGNP DSDPLPTPEI
101: DEKDVVVIKE RNFTDVIENN QYVLVEFYAP WCGHCQSLAP EYAAAATELK EDGVVLAKID ATEENELAQE YRVQGFPTLL FFVDGEHKPY TGGRTKETIV
201: TWVKKKIGPG VYNLTTLDDA EKVLTSGNKV VLGYLNSLVG VEHDQLNAAS KAEDDVNFYQ TVNPDVAKMF HLDPESKRPA LVLVKKEEEK ISHFDGEFVK
301: SALVSFVSAN KLALVSVFTR ETAPEIFESA IKKQLLLFVT KNESEKVLTE FQEAAKSFKG KLIFVSVDLD NEDYGKPVAE YFGVSGNGPK LIGYTGNEDP
401: KKYFFDGEIQ SDKIKIFGED FLNDKLKPFY KSDPIPEKND EDVKIVVGDN FDEIVLDDSK DVLLEVYAPW CGHCQALEPM YNKLAKHLRS IDSLVITKMD
501: GTTNEHPKAK AEGFPTILFF PAGNKTSEPI TVDTDRTVVA FYKFLRKHAT IPFKLEKPAS TESPKTAEST PKVETTETKE SPDSTTKSSQ SDSKDEL
Arabidopsis Description
PDIL1-4Protein disulfide-isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178UQB2]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.