Factsheet for TraesCS6D01G004700.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 4
endoplasmic reticulum 7
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G000600.1	Wheat	endoplasmic reticulum	94.38	95.68
TraesCS6D01G005200.1	Wheat	golgi	95.57	95.41
TraesCS6A01G001100.1	Wheat	endoplasmic reticulum	93.7	94.5
TraesCS3B01G532200.1	Wheat	endoplasmic reticulum	93.7	93.54
HORVU6Hr1G001700.1	Barley	endoplasmic reticulum, plastid	89.27	82.52
Os02t0100100-01	Rice	plasma membrane	71.04	74.07
EES06089	Sorghum	endoplasmic reticulum	70.87	72.73
Zm00001d054106_P003	Maize	endoplasmic reticulum	69.51	71.45
Zm00001d014912_P003	Maize	extracellular, plasma membrane	67.97	71.12
GSMUA_AchrUn_...	Banana	cytosol, endoplasmic reticulum	47.36	60.57
KRH22896	Soybean	endoplasmic reticulum	56.39	59.32
VIT_13s0019g04240.t01	Wine grape	endoplasmic reticulum	53.83	56.33
PGSC0003DMT400033517	Potato	endoplasmic reticulum, mitochondrion	54.0	56.31
Solyc04g049450.2.1	Tomato	endoplasmic reticulum, nucleus, plastid	53.83	56.13
VIT_06s0004g02890.t01	Wine grape	endoplasmic reticulum	54.86	55.81
KRH24870	Soybean	endoplasmic reticulum	54.68	55.44
KRH29922	Soybean	endoplasmic reticulum	55.2	55.29
KRH26418	Soybean	endoplasmic reticulum	55.71	54.32
CDY56958	Canola	endoplasmic reticulum	53.49	54.23
TraesCS6D01G004600.2	Wheat	endoplasmic reticulum	31.18	54.14
CDX73422	Canola	endoplasmic reticulum	52.98	53.99
Bra007120.1-P	Field mustard	endoplasmic reticulum	52.98	53.71
Bra002464.1-P	Field mustard	endoplasmic reticulum	54.34	53.52
AT3G54960.1	Thale cress	endoplasmic reticulum	52.3	53.02
CDY53631	Canola	endoplasmic reticulum	53.83	53.02
AT5G60640.1	Thale cress	endoplasmic reticulum	53.83	52.93
CDY31525	Canola	endoplasmic reticulum	53.66	52.85
PGSC0003DMT400020867	Potato	endoplasmic reticulum	51.62	52.33
Solyc11g069400.1.1	Tomato	plastid	51.62	52.24
CDY09193	Canola	endoplasmic reticulum	51.79	51.79
Bra020239.1-P	Field mustard	endoplasmic reticulum	51.45	51.36
PGSC0003DMT400008689	Potato	endoplasmic reticulum	47.02	49.91
Solyc06g075210.2.1	Tomato	unclear	45.66	48.82
TraesCS7D01G121800.1	Wheat	endoplasmic reticulum	28.62	30.88
TraesCS4D01G098400.1	Wheat	golgi	26.75	30.49
TraesCS2D01G305000.1	Wheat	endoplasmic reticulum	25.21	28.63
TraesCS1D01G106500.1	Wheat	endoplasmic reticulum	16.18	25.89
TraesCS6D01G215100.1	Wheat	endoplasmic reticulum	16.52	23.26
TraesCS2D01G302900.1	Wheat	endoplasmic reticulum	17.21	22.39
TraesCS5D01G241200.1	Wheat	golgi	16.52	22.05
TraesCS4D01G197000.1	Wheat	endoplasmic reticulum	5.11	19.87

Protein Annotations

Gene3D:3.40.30.10	MapMan:50.5.3	InterPro:Disulphide_isomerase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0008150	GO:GO:0009987
GO:GO:0016853	GO:GO:0019725	GO:GO:0045454	InterPro:IPR013766	PFAM:PF00085	PFAM:PF13848
PRINTS:PR00421	ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR18929	PANTHER:PTHR18929:SF121	InterPro:Prot_disulphide_isomerase
SUPFAM:SSF52833	SignalP:SignalP-noTM	TIGRFAMs:TIGR01126	TIGRFAMs:TIGR01130	TMHMM:TMhelix	InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain	EnsemblPlantsGene:TraesCS6D01G004700	EnsemblPlants:TraesCS6D01G004700.1	TIGR:cd02961	TIGR:cd02981
TIGR:cd02982	TIGR:cd02995	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6D:+:2240069..2244510

Molecular Weight (calculated)

63943.3 Da

IEP (calculated)

4.435

GRAVY (calculated)

-0.222

Length

587 amino acids

Sequence
(BLAST)

001: MAAMPMPSPR SLLLLLLLAT PFLLLPLAAS APTSNPDIDL EYLIKNAGLD DSTPATTATD PEDDGAPDFP GLDADYKDED EDLFGDDDGP EESSHPSAAD
101: EAHVLLLTAA NFTAVLAARR HVMVEFYAPW CGHCRALAPH YSAAATHLAE QGVDVALAKV DATEDHDLAQ AHGVQGYPTL LFFIDGVPRD YSGERTKDAI
201: VAWIGKKLGP AVQNLTTVDE AEKIVTGDDV AVLAFLDHLS GAHSDELAAA SRLEDTISFY QTTSPDVAKL FHIDPEAKRP SVVLLKKEEE KLTVFDGEFR
301: ASAIAEFVSA NKIPLITTLT QETAPAIFDN PIKKQILLFA VAKESSKFLP IIKETAKSFK GKLLFVFVER DNEEVGEPVA NYFGITGNET TVLAYTGNED
401: AKKFFFSGEI SLDTIKEFAQ DFLEDKLTPS YKSDPVPESN DEDVKVVVGK SLDQLVLDES KDVLLEVYAP WCGHCQSLEP IYNKLAKYLR GIDSLVIAKM
501: DGTNNEHPRA KPDGFPTILF YPAGKKSFEP ITFEGDRTVV EMYKFLKKHA AIPFKLKRPD SSAARTDGPG STAEGEKSSG SNPKDEL

Best Arabidopsis Sequence Match ( AT5G60640.1 )
(BLAST)

001: MAFRVLLLFS LTALLIFSAV SPSFAASSSD DVDDEDLSFL EDLKEDDVPG ADSLSSSTGF DEFEGGEEED PDMYNDDDDE EGDFSDLGNP DSDPLPTPEI
101: DEKDVVVIKE RNFTDVIENN QYVLVEFYAP WCGHCQSLAP EYAAAATELK EDGVVLAKID ATEENELAQE YRVQGFPTLL FFVDGEHKPY TGGRTKETIV
201: TWVKKKIGPG VYNLTTLDDA EKVLTSGNKV VLGYLNSLVG VEHDQLNAAS KAEDDVNFYQ TVNPDVAKMF HLDPESKRPA LVLVKKEEEK ISHFDGEFVK
301: SALVSFVSAN KLALVSVFTR ETAPEIFESA IKKQLLLFVT KNESEKVLTE FQEAAKSFKG KLIFVSVDLD NEDYGKPVAE YFGVSGNGPK LIGYTGNEDP
401: KKYFFDGEIQ SDKIKIFGED FLNDKLKPFY KSDPIPEKND EDVKIVVGDN FDEIVLDDSK DVLLEVYAPW CGHCQALEPM YNKLAKHLRS IDSLVITKMD
501: GTTNEHPKAK AEGFPTILFF PAGNKTSEPI TVDTDRTVVA FYKFLRKHAT IPFKLEKPAS TESPKTAEST PKVETTETKE SPDSTTKSSQ SDSKDEL

Arabidopsis Description

PDIL1-4Protein disulfide-isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178UQB2]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.