Subcellular Localization
min:
: max
Winner_takes_all: unclear
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 7
- vacuole 5
- plasma membrane 5
- golgi 5
- plastid 2
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
unclear:
26455813
|
msms PMID:
26455813
doi
Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium; Goethe University, Cluster of Excellence Frankfurt, Frankfurt/Main, Germany; Goethe University, Buchmann Institute of Molecular Life Sciences, Frankfurt/Main, Germany. Electronic address: schleiff@bio.uni-frankfurt.de., SPOT-ITN Consortium; University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria., University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria; School of Biotechnology and Bioinformatics, D.Y. Patil University, Mumbai, India.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400008689 | Potato | endoplasmic reticulum | 89.98 | 89.33 |
| Solyc11g069400.1.1 | Tomato | plastid | 67.03 | 63.45 |
| GSMUA_Achr8P18890_001 | Banana | cytosol | 52.46 | 61.94 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum | 51.18 | 60.69 |
| Solyc04g049450.2.1 | Tomato | endoplasmic reticulum, nucleus, plastid | 54.64 | 53.29 |
| CDY31525 | Canola | endoplasmic reticulum | 55.56 | 51.17 |
| CDY53631 | Canola | endoplasmic reticulum | 55.37 | 51.01 |
| Bra002464.1-P | Field mustard | endoplasmic reticulum | 55.19 | 50.84 |
| CDY09193 | Canola | endoplasmic reticulum | 54.1 | 50.6 |
| AT5G60640.1 | Thale cress | endoplasmic reticulum | 55.01 | 50.59 |
| Bra020239.1-P | Field mustard | endoplasmic reticulum | 54.1 | 50.51 |
| CDY56958 | Canola | endoplasmic reticulum | 52.28 | 49.57 |
| Bra007120.1-P | Field mustard | endoplasmic reticulum | 52.09 | 49.4 |
| CDX73422 | Canola | endoplasmic reticulum | 51.73 | 49.31 |
| EES06089 | Sorghum | endoplasmic reticulum | 51.18 | 49.13 |
| Os02t0100100-01 | Rice | plasma membrane | 50.09 | 48.85 |
| Zm00001d014912_P003 | Maize | extracellular, plasma membrane | 49.54 | 48.48 |
| AT3G54960.1 | Thale cress | endoplasmic reticulum | 51.0 | 48.36 |
| Zm00001d054106_P003 | Maize | endoplasmic reticulum | 50.09 | 48.16 |
| TraesCS6A01G000600.1 | Wheat | endoplasmic reticulum | 49.18 | 46.63 |
| TraesCS6A01G001100.1 | Wheat | endoplasmic reticulum | 49.36 | 46.56 |
| TraesCS6D01G004700.1 | Wheat | endoplasmic reticulum | 48.82 | 45.66 |
| TraesCS6D01G005200.1 | Wheat | golgi | 48.82 | 45.58 |
| TraesCS3B01G532200.1 | Wheat | endoplasmic reticulum | 48.82 | 45.58 |
| TraesCS6B01G005500.1 | Wheat | endoplasmic reticulum | 47.54 | 43.94 |
| HORVU6Hr1G001700.1 | Barley | endoplasmic reticulum, plastid | 49.91 | 43.15 |
| TraesCS6B01G005100.1 | Wheat | endoplasmic reticulum | 22.77 | 31.09 |
| Solyc03g120720.2.1 | Tomato | plastid | 27.14 | 27.7 |
| Solyc06g060290.2.1 | Tomato | plastid | 22.04 | 27.63 |
| Solyc06g005940.2.1 | Tomato | nucleus, plastid | 23.32 | 25.65 |
| Solyc05g056400.2.1 | Tomato | plastid | 24.23 | 25.14 |
| Solyc05g018700.2.1 | Tomato | plastid | 21.86 | 24.19 |
| Solyc01g100320.2.1 | Tomato | extracellular | 14.39 | 22.01 |
| Solyc11g069690.1.1 | Tomato | extracellular | 4.74 | 20.8 |
| Solyc11g019920.1.1 | Tomato | plastid, unclear | 14.75 | 18.62 |
| Solyc06g065320.2.1 | Tomato | endoplasmic reticulum | 14.94 | 18.55 |
| Solyc07g049450.2.1 | Tomato | nucleus | 13.66 | 17.36 |
Protein Annotations
| Gene3D:3.40.30.10 | MapMan:50.5.3 | GO:GO:0003674 | GO:GO:0003756 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0006457 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016853 | GO:GO:0019725 | GO:GO:0034976 | GO:GO:0045454 |
| InterPro:IPR013766 | UniProt:K4C9N7 | PFAM:PF00085 | PFAM:PF13848 | PFscan:PS51352 | PANTHER:PTHR18929 |
| PANTHER:PTHR18929:SF121 | InterPro:Prot_disulphide_isomerase | SUPFAM:SSF52833 | SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc06g075210.2 | EnsemblPlants:Solyc06g075210.2.1 |
| TIGRFAMs:TIGR01130 | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI0002766990 | SEG:seg | : |
Description
No Description!
Coordinates
chr6:+:46672685..46676426
Molecular Weight (calculated)
61927.2 Da
IEP (calculated)
4.678
GRAVY (calculated)
-0.356
Length
549 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSRLIIFLC FSSLLFLTPS HAASSDDNDE FLSFLEDYED SDEPDTPNHE DPPEVSSPPF DRAQEAEDIN IDDENVVALT DSNINDFLED NKYVMLEFYT
101: PWNGYCKALA PEYADAATEL KTENVVLAKI NAAKEVEAAD SYDVRSFPTI FFFVNSDPEL YKGRRTKNAI VSWIKKKIGS GVYNITTTED AERVLTSEDK
201: VVLAYLDSLV GSVTKQLAAV SKLENDVNFY QTTDPNVAKL FNIEENAKRP ALVMLKKEPE KVVHYDGKFK KSSIAKFVSA SKLPLVTTFT KETAPLIFAS
301: PIKKHILLFA SENDTEKLFP TFQDAAKLFK GKMKLNFVFV KTNDEEVGRP VSDYFGVTGD GPQVIGYIEE DNRKKFRFNE DITLEKIKAF NEDFLEDKLK
401: PFYKSDPIPE TNDADVKIVV GNNFDEIILN ESKDVFLEIY APWCRQCQAL EPMINKLAHH LHGVESLVIA KMEGTSNEHP RAKFIGFPSL QFFPAGNKSI
501: DPILVDTEPT LVSLYKFIKK NAAIPFKIER PASSKVGVKR ENGNARDEL
101: PWNGYCKALA PEYADAATEL KTENVVLAKI NAAKEVEAAD SYDVRSFPTI FFFVNSDPEL YKGRRTKNAI VSWIKKKIGS GVYNITTTED AERVLTSEDK
201: VVLAYLDSLV GSVTKQLAAV SKLENDVNFY QTTDPNVAKL FNIEENAKRP ALVMLKKEPE KVVHYDGKFK KSSIAKFVSA SKLPLVTTFT KETAPLIFAS
301: PIKKHILLFA SENDTEKLFP TFQDAAKLFK GKMKLNFVFV KTNDEEVGRP VSDYFGVTGD GPQVIGYIEE DNRKKFRFNE DITLEKIKAF NEDFLEDKLK
401: PFYKSDPIPE TNDADVKIVV GNNFDEIILN ESKDVFLEIY APWCRQCQAL EPMINKLAHH LHGVESLVIA KMEGTSNEHP RAKFIGFPSL QFFPAGNKSI
501: DPILVDTEPT LVSLYKFIKK NAAIPFKIER PASSKVGVKR ENGNARDEL
001: MAFRVLLLFS LTALLIFSAV SPSFAASSSD DVDDEDLSFL EDLKEDDVPG ADSLSSSTGF DEFEGGEEED PDMYNDDDDE EGDFSDLGNP DSDPLPTPEI
101: DEKDVVVIKE RNFTDVIENN QYVLVEFYAP WCGHCQSLAP EYAAAATELK EDGVVLAKID ATEENELAQE YRVQGFPTLL FFVDGEHKPY TGGRTKETIV
201: TWVKKKIGPG VYNLTTLDDA EKVLTSGNKV VLGYLNSLVG VEHDQLNAAS KAEDDVNFYQ TVNPDVAKMF HLDPESKRPA LVLVKKEEEK ISHFDGEFVK
301: SALVSFVSAN KLALVSVFTR ETAPEIFESA IKKQLLLFVT KNESEKVLTE FQEAAKSFKG KLIFVSVDLD NEDYGKPVAE YFGVSGNGPK LIGYTGNEDP
401: KKYFFDGEIQ SDKIKIFGED FLNDKLKPFY KSDPIPEKND EDVKIVVGDN FDEIVLDDSK DVLLEVYAPW CGHCQALEPM YNKLAKHLRS IDSLVITKMD
501: GTTNEHPKAK AEGFPTILFF PAGNKTSEPI TVDTDRTVVA FYKFLRKHAT IPFKLEKPAS TESPKTAEST PKVETTETKE SPDSTTKSSQ SDSKDEL
101: DEKDVVVIKE RNFTDVIENN QYVLVEFYAP WCGHCQSLAP EYAAAATELK EDGVVLAKID ATEENELAQE YRVQGFPTLL FFVDGEHKPY TGGRTKETIV
201: TWVKKKIGPG VYNLTTLDDA EKVLTSGNKV VLGYLNSLVG VEHDQLNAAS KAEDDVNFYQ TVNPDVAKMF HLDPESKRPA LVLVKKEEEK ISHFDGEFVK
301: SALVSFVSAN KLALVSVFTR ETAPEIFESA IKKQLLLFVT KNESEKVLTE FQEAAKSFKG KLIFVSVDLD NEDYGKPVAE YFGVSGNGPK LIGYTGNEDP
401: KKYFFDGEIQ SDKIKIFGED FLNDKLKPFY KSDPIPEKND EDVKIVVGDN FDEIVLDDSK DVLLEVYAPW CGHCQALEPM YNKLAKHLRS IDSLVITKMD
501: GTTNEHPKAK AEGFPTILFF PAGNKTSEPI TVDTDRTVVA FYKFLRKHAT IPFKLEKPAS TESPKTAEST PKVETTETKE SPDSTTKSSQ SDSKDEL
Arabidopsis Description
PDIL1-4Protein disulfide-isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178UQB2]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.