Factsheet for Solyc01g100320.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 9
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

extracellular: 22364583
plastid: 22908117
nucleus: 25464976
plastid: 26371478
unclear: 26455813
nucleus: 28394025
extracellular: 29876421

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

msms PMID: 26371478 doi

M Suzuki, S Takahashi, T Kondo, H Dohra, Y Ito, Y Kiriiwa, M Hayashi, S Kamiya, M Kato, M Fujiwara, Y Fukao, M Kobayashi, N Nagata, R Motohashi

Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.

msms PMID: 26455813 doi

P Paul, P Chaturvedi, M Selymesi, A Ghatak, A Mesihovic, KD Scharf, W Weckwerth, S Simm, E Schleiff

Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium; Goethe University, Cluster of Excellence Frankfurt, Frankfurt/Main, Germany; Goethe University, Buchmann Institute of Molecular Life Sciences, Frankfurt/Main, Germany. Electronic address: schleiff@bio.uni-frankfurt.de., SPOT-ITN Consortium; University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria., University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria; School of Biotechnology and Bioinformatics, D.Y. Patil University, Mumbai, India.

msms PMID: 22364583 doi

P Shah, AL Powell, R Orlando, C Bergmann, G Gutierrez-Sanchez

Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States.

msms PMID: 25464976 doi

Y Wang, W Wang, J Cai, Y Zhang, G Qin, S Tian

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400007185	Potato	endoplasmic reticulum	97.21	97.21
KRH69242	Soybean	cytosol	61.84	78.17
KRH31823	Soybean	endoplasmic reticulum	78.55	77.47
KRH68449	Soybean	endoplasmic reticulum	77.99	77.35
GSMUA_Achr2P02130_001	Banana	endoplasmic reticulum	77.72	77.07
GSMUA_Achr11P...	Banana	endoplasmic reticulum	77.72	77.07
AT2G47470.1	Thale cress	endoplasmic reticulum	76.32	75.9
CDX95726	Canola	endoplasmic reticulum	75.77	75.14
Bra000454.1-P	Field mustard	endoplasmic reticulum	75.49	74.86
CDX83326	Canola	endoplasmic reticulum	75.21	74.59
Os05t0156300-01	Rice	plasma membrane	76.04	74.39
KRH69241	Soybean	endoplasmic reticulum	17.27	73.81
CDY57723	Canola	endoplasmic reticulum	74.09	73.68
Bra004455.1-P	Field mustard	endoplasmic reticulum	73.54	73.13
CDX80106	Canola	endoplasmic reticulum	73.54	73.13
EES19066	Sorghum	endoplasmic reticulum	74.37	72.75
Zm00001d040766_P001	Maize	plasma membrane	72.98	71.39
Os01t0339900-01	Rice	plasma membrane	73.54	71.16
EES00714	Sorghum	endoplasmic reticulum	72.42	70.65
Zm00001d037590_P002	Maize	endoplasmic reticulum	73.82	70.11
TraesCS1D01G106500.1	Wheat	endoplasmic reticulum	71.31	69.75
TraesCS1B01G126100.1	Wheat	endoplasmic reticulum	71.31	69.75
TraesCS1A01G097700.1	Wheat	golgi	71.31	69.75
KRH54865	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	61.28	69.4
KRG96732	Soybean	endoplasmic reticulum	73.82	69.37
HORVU1Hr1G022810.1	Barley	endoplasmic reticulum	71.87	64.02
CDX95413	Canola	cytosol	42.62	64.02
Zm00001d009651_P001	Maize	endoplasmic reticulum	30.36	53.43
Zm00001d015747_P022	Maize	plastid	45.4	47.52
Zm00001d024894_P016	Maize	plastid	45.4	47.52
Solyc11g069690.1.1	Tomato	extracellular	10.31	29.6
Solyc07g049450.2.1	Tomato	nucleus	30.92	25.69
Solyc11g069400.1.1	Tomato	plastid	28.97	17.93
Solyc06g060290.2.1	Tomato	plastid	21.73	17.81
Solyc04g049450.2.1	Tomato	endoplasmic reticulum, nucleus, plastid	27.58	17.58
Solyc05g056400.2.1	Tomato	plastid	25.63	17.39
Solyc06g005940.2.1	Tomato	nucleus, plastid	22.28	16.03
Solyc06g075210.2.1	Tomato	unclear	22.01	14.39
Solyc05g018700.2.1	Tomato	plastid	19.78	14.31
Solyc06g065320.2.1	Tomato	endoplasmic reticulum	17.27	14.03
Solyc11g019920.1.1	Tomato	plastid, unclear	16.43	13.56
Solyc03g120720.2.1	Tomato	plastid	19.5	13.01

Protein Annotations

Gene3D:1.20.1150.12	Gene3D:3.40.30.10	MapMan:35.1	InterPro:Disulphide_isomerase	InterPro:ERp29_C	InterPro:ERp29_C_sf
GO:GO:0000003	GO:GO:0003674	GO:GO:0003756	GO:GO:0003824	GO:GO:0005575	GO:GO:0005618
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0005783
GO:GO:0006457	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150	GO:GO:0009505	GO:GO:0009553
GO:GO:0009567	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0009856	GO:GO:0009987
GO:GO:0016020	GO:GO:0016853	GO:GO:0019725	GO:GO:0030312	GO:GO:0034976	GO:GO:0045454
GO:GO:0046686	GO:GO:0048868	InterPro:IPR013766	InterPro:IPR036356	UniProt:K4B166	PFAM:PF00085
PFAM:PF07749	PRINTS:PR00421	ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR18929	PANTHER:PTHR18929:SF187
SUPFAM:SSF47933	SUPFAM:SSF52833	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc01g100320.2	EnsemblPlants:Solyc01g100320.2.1	TIGRFAMs:TIGR01126
TMHMM:TMhelix	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain	UniParc:UPI0002767514	:

Description

Protein disulfide-isomerase like 2-1 [Source:Projected from Arabidopsis thaliana (AT2G47470) UniProtKB/Swiss-Prot;Acc:O22263]

Coordinates

chr1:-:90386154..90392614

Molecular Weight (calculated)

39456.6 Da

IEP (calculated)

5.233

GRAVY (calculated)

-0.331

Length

359 amino acids

Sequence
(BLAST)

001: MGRSQICSAL AILALFFFSS ALADDVVVLT EENFDKEIGQ DRAALVEFYA PWCGHCKKLA PEYEKLGASF KKAKSVLIGK IDCDEHKSVC SKYGVQGYPT
101: IQWFPKGSLE PKKYEGARSA EALAEYVNSE AGTNVKIASI PSSVVVLSSD NFDEIVLDET KDVLVEFYAP WCGHCKSLAP IYEKVATAFR QEEDVIIANL
201: DADNHKDLAE KYGVSGYPTL KFFPKGNKAG EDYDGGRDAD DFVNFINEKC GTSRDSKGQF TSKAGIVESL DTLVKEFVGA TNEEKKAVFS KMEDEAGKLK
301: GSAARYGKIY LKAAKSSMEK GADYANNEIQ RLERMLAKSI SPTKADEFTL KKNILATFA

Best Arabidopsis Sequence Match ( AT2G47470.1 )
(BLAST)

001: MAKSQIWFGF ALLALLLVSA VADDVVVLTD DSFEKEVGKD KGALVEFYAP WCGHCKKLAP EYEKLGASFK KAKSVLIAKV DCDEQKSVCT KYGVSGYPTI
101: QWFPKGSLEP QKYEGPRNAE ALAEYVNKEG GTNVKLAAVP QNVVVLTPDN FDEIVLDQNK DVLVEFYAPW CGHCKSLAPT YEKVATVFKQ EEGVVIANLD
201: ADAHKALGEK YGVSGFPTLK FFPKDNKAGH DYDGGRDLDD FVSFINEKSG TSRDSKGQLT SKAGIVESLD ALVKELVAAS EDEKKAVLSR IEEEASTLKG
301: STTRYGKLYL KLAKSYIEKG SDYASKETER LGRVLGKSIS PVKADELTLK RNILTTFVAS S

Arabidopsis Description

PDIL2-1UNE5 [Source:UniProtKB/TrEMBL;Acc:A0A178W1F8]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.