CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 6
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000454.1-P	Field mustard	endoplasmic reticulum	99.45	99.45
CDX95726	Canola	endoplasmic reticulum	98.07	98.07
AT2G47470.1	Thale cress	endoplasmic reticulum	93.37	93.63
CDX80106	Canola	endoplasmic reticulum	93.37	93.63
CDY57723	Canola	endoplasmic reticulum	93.37	93.63
CDX95413	Canola	cytosol	51.1	77.41
KRH31823	Soybean	endoplasmic reticulum	75.69	75.27
Solyc01g100320.2.1	Tomato	extracellular	74.59	75.21
PGSC0003DMT400007185	Potato	endoplasmic reticulum	74.03	74.65
KRH69242	Soybean	cytosol	58.56	74.65
GSMUA_Achr2P02130_001	Banana	endoplasmic reticulum	74.03	74.03
GSMUA_Achr11P...	Banana	endoplasmic reticulum	74.03	74.03
Os05t0156300-01	Rice	plasma membrane	72.93	71.93
KRH69241	Soybean	endoplasmic reticulum	16.57	71.43
Zm00001d040766_P001	Maize	plasma membrane	72.38	71.39
TraesCS1D01G106500.1	Wheat	endoplasmic reticulum	71.82	70.84
TraesCS1B01G126100.1	Wheat	endoplasmic reticulum	71.82	70.84
TraesCS1A01G097700.1	Wheat	golgi	71.82	70.84
EES19066	Sorghum	endoplasmic reticulum	71.55	70.57
EES00714	Sorghum	endoplasmic reticulum	71.27	70.11
Os01t0339900-01	Rice	plasma membrane	70.99	69.27
Zm00001d037590_P002	Maize	endoplasmic reticulum	70.44	67.46
KRH54865	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	58.29	66.56
HORVU1Hr1G022810.1	Barley	endoplasmic reticulum	71.55	64.27
Zm00001d009651_P001	Maize	endoplasmic reticulum	29.01	51.47
Zm00001d024894_P016	Maize	plastid	43.37	45.77
Zm00001d015747_P022	Maize	plastid	42.82	45.19
CDX95112	Canola	endoplasmic reticulum	14.09	35.42
CDX93606	Canola	endoplasmic reticulum	13.81	34.72
CDY53400	Canola	endoplasmic reticulum	25.14	26.92
CDX79207	Canola	cytosol	8.56	25.62
CDX79497	Canola	endoplasmic reticulum	29.01	23.7
CDY18278	Canola	endoplasmic reticulum	28.18	23.39
CDY52544	Canola	endoplasmic reticulum	27.62	22.52
CDY12149	Canola	endoplasmic reticulum	27.35	22.35
CDY01314	Canola	endoplasmic reticulum	25.97	18.95
CDY00400	Canola	endoplasmic reticulum	26.24	18.85
CDX96575	Canola	endoplasmic reticulum	25.97	18.76
CDY08176	Canola	endoplasmic reticulum	25.69	18.67
CDY04673	Canola	endoplasmic reticulum	25.69	18.67
CDX87514	Canola	endoplasmic reticulum	26.24	18.66
CDY38821	Canola	cytosol, endoplasmic reticulum	25.69	18.6
CDX88376	Canola	cytosol, endoplasmic reticulum	25.97	18.4
CDY40898	Canola	endoplasmic reticulum	25.69	18.24
CDY38344	Canola	endoplasmic reticulum	25.69	18.2
CDX73422	Canola	endoplasmic reticulum	26.24	16.49
CDY56958	Canola	endoplasmic reticulum	26.24	16.41
CDY09193	Canola	endoplasmic reticulum	26.52	16.35
CDY53631	Canola	endoplasmic reticulum	26.8	16.28
CDY31525	Canola	endoplasmic reticulum	26.8	16.28
CDY37102	Canola	endoplasmic reticulum	17.13	14.25
CDX73337	Canola	endoplasmic reticulum	16.85	14.02
CDY52981	Canola	endoplasmic reticulum	19.34	13.23
CDY02550	Canola	endoplasmic reticulum	19.06	13.12
CDY68572	Canola	endoplasmic reticulum	18.78	12.98
CDY47529	Canola	endoplasmic reticulum	18.23	12.55

Protein Annotations

Gene3D:1.20.1150.12	Gene3D:3.40.30.10	MapMan:35.1	GO:A0A078D1S8	EnsemblPlants:CDX83326	ProteinID:CDX83326
ProteinID:CDX83326.1	InterPro:Disulphide_isomerase	InterPro:ERp29_C	InterPro:ERp29_C_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0008150
GO:GO:0009987	GO:GO:0016853	GO:GO:0019725	GO:GO:0045454	EnsemblPlantsGene:GSBRNA2T00138888001	InterPro:IPR013766
InterPro:IPR036356	PFAM:PF00085	PFAM:PF07749	PRINTS:PR00421	ScanProsite:PS00194	PFscan:PS51352
PANTHER:PTHR18929	PANTHER:PTHR18929:SF187	SUPFAM:SSF47933	SUPFAM:SSF52833	SignalP:SignalP-noTM	TIGRFAMs:TIGR01126
TMHMM:TMhelix	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain	UniParc:UPI0004EE51D7	SEG:seg

Description

BnaA03g21800D

Coordinates

chrLK031832:-:1069636..1072155

Molecular Weight (calculated)

39492.9 Da

IEP (calculated)

5.858

GRAVY (calculated)

-0.262

Length

362 amino acids

Sequence
(BLAST)

001: MAKSQIWFGL ASLVALLVVS AVADDVVVLT DDSFEKEVGK DRGALVEFYA PWCGHCKKLA PEYEKLGASF KKAKSILIAK VDCDEHKSVC TKYGVSGYPT
101: IQWFPKGSLE PQKYEGARNA EALAEYVNKE GGTNVKLAAA PQNVVVLTPD NFDEIVLDQN KDVLVEFYAP WCGHCKSLAP VYEKVATVFK QEEGVVIANL
201: DADAHKSLGE KYGVSGFPTL KFFPKDNKAG QDYEGGRDLD DFVGFINEKV GTSRDSQGQL TSKAGIVESL DALVKELVAA SEDEKKTILS RIEEEASNLK
301: GSTTRYGKLY SKLAKSYIEK GSGYATKEVE RLGRVLGKSI SPVKADELTL KRNILSTFVA SS

Best Arabidopsis Sequence Match ( AT2G47470.1 )
(BLAST)

001: MAKSQIWFGF ALLALLLVSA VADDVVVLTD DSFEKEVGKD KGALVEFYAP WCGHCKKLAP EYEKLGASFK KAKSVLIAKV DCDEQKSVCT KYGVSGYPTI
101: QWFPKGSLEP QKYEGPRNAE ALAEYVNKEG GTNVKLAAVP QNVVVLTPDN FDEIVLDQNK DVLVEFYAPW CGHCKSLAPT YEKVATVFKQ EEGVVIANLD
201: ADAHKALGEK YGVSGFPTLK FFPKDNKAGH DYDGGRDLDD FVSFINEKSG TSRDSKGQLT SKAGIVESLD ALVKELVAAS EDEKKAVLSR IEEEASTLKG
301: STTRYGKLYL KLAKSYIEKG SDYASKETER LGRVLGKSIS PVKADELTLK RNILTTFVAS S

Arabidopsis Description

PDIL2-1UNE5 [Source:UniProtKB/TrEMBL;Acc:A0A178W1F8]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.