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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 7
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY52981 Canola endoplasmic reticulum 95.04 94.14
CDY47529 Canola endoplasmic reticulum 84.35 84.03
CDY02550 Canola endoplasmic reticulum 83.78 83.46
AT1G52260.1 Thale cress endoplasmic reticulum 83.02 81.01
PGSC0003DMT400006756 Potato endoplasmic reticulum 60.5 58.92
KRH09876 Soybean endoplasmic reticulum 58.59 58.7
Solyc03g120720.2.1 Tomato plastid 59.73 58.18
KRH23443 Soybean endoplasmic reticulum 54.96 58.06
VIT_09s0002g04250.t01 Wine grape endoplasmic reticulum 59.35 57.91
GSMUA_Achr10P... Banana endoplasmic reticulum 51.91 50.37
Zm00001d045218_P002 Maize endoplasmic reticulum 49.24 48.77
Os06t0163400-01 Rice plasma membrane 49.05 48.22
TraesCS7A01G123900.1 Wheat endoplasmic reticulum 48.85 47.32
TraesCS7D01G121800.1 Wheat endoplasmic reticulum 48.85 47.06
EER87912 Sorghum endoplasmic reticulum 48.28 46.42
TraesCS7B01G022800.1 Wheat endoplasmic reticulum 48.66 45.95
HORVU7Hr1G026030.1 Barley cytosol 38.93 34.81
CDY09193 Canola endoplasmic reticulum 31.11 27.77
CDY56958 Canola endoplasmic reticulum 29.58 26.77
CDX73422 Canola endoplasmic reticulum 29.39 26.74
CDY53631 Canola endoplasmic reticulum 30.34 26.68
CDX96575 Canola endoplasmic reticulum 25.19 26.35
CDY31525 Canola endoplasmic reticulum 29.96 26.34
CDY01314 Canola endoplasmic reticulum 24.81 26.21
CDY38821 Canola cytosol, endoplasmic reticulum 25.0 26.2
CDY00400 Canola endoplasmic reticulum 24.81 25.79
CDY38344 Canola endoplasmic reticulum 24.24 24.85
CDY40898 Canola endoplasmic reticulum 23.86 24.51
CDY04673 Canola endoplasmic reticulum 23.28 24.5
CDX87514 Canola endoplasmic reticulum 23.47 24.16
CDX88376 Canola cytosol, endoplasmic reticulum 23.47 24.07
CDY08176 Canola endoplasmic reticulum 22.71 23.9
CDX93606 Canola endoplasmic reticulum 6.3 22.92
CDX95112 Canola endoplasmic reticulum 6.3 22.92
CDY53400 Canola endoplasmic reticulum 14.12 21.89
CDX79207 Canola cytosol 4.77 20.66
CDY57723 Canola endoplasmic reticulum 13.36 19.39
CDX95726 Canola endoplasmic reticulum 13.36 19.34
CDX80106 Canola endoplasmic reticulum 13.17 19.11
CDX83326 Canola endoplasmic reticulum 12.98 18.78
CDY18278 Canola endoplasmic reticulum 14.5 17.43
CDY37102 Canola endoplasmic reticulum 13.55 16.32
CDX73337 Canola endoplasmic reticulum 13.36 16.09
CDX79497 Canola endoplasmic reticulum 13.55 16.03
CDY52544 Canola endoplasmic reticulum 12.98 15.32
CDY12149 Canola endoplasmic reticulum 12.79 15.12
CDX95413 Canola cytosol 5.73 12.55
Protein Annotations
Gene3D:3.40.30.10MapMan:50.5.3GO:A0A078JT18UniProt:A0A078JT18EnsemblPlants:CDY68572ProteinID:CDY68572
ProteinID:CDY68572.1GO:GO:0005575GO:GO:0005623GO:GO:0008150GO:GO:0009987GO:GO:0019725
GO:GO:0045454EnsemblPlantsGene:GSBRNA2T00075945001InterPro:IPR013766PFAM:PF00085PFAM:PF13848PFscan:PS51352
PANTHER:PTHR18929PANTHER:PTHR18929:SF121SUPFAM:SSF52833SignalP:SignalP-noTMInterPro:Thioredoxin-like_sfInterPro:Thioredoxin_domain
UniParc:UPI0004EDC9B1SEG:seg::::
Description
BnaC06g41290DBnaC06g41290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JT18]
Coordinates
chrLK037580:-:1984..4679
Molecular Weight (calculated)
58532.9 Da
IEP (calculated)
4.818
GRAVY (calculated)
-0.201
Length
524 amino acids
Sequence
(BLAST)
001: MSINPKPQSS LFTFILLLLL TSAYSSSNEP GSDDLEQLLA VDEQLQQDLP PHHQQSEAET VSKAQRIVLE LSGDNARRVI GGNEFVMVLG YAPWCARSAD
101: LMPKFSEAAT ALKEIGSPVV MAKIDGDRYG KVASEMEIKG FPTLLLFVNG TSQAYTGGFS AEEIVIWVQK KTGAPIVTVN TVDEAQRFLK KYHTFVVGLF
201: NKFEGSEYNE FMKAAKSDDE IQFVETSDSE VAKLLFPELK TSNVFIGMVK TEAERYTAYE GSYNMEKILE FLGKNKFPLV TKLSESNTAW VYSSPVKLQV
301: MIFAKADDFQ NMAQPLEDFA RKFKSKLMFI YIDITNENLV MPFLTLFGIE HANKTVVAAF DNKLNSKYLL ESDPSPSNIE KFCSGLADGT IPQYYRSEPV
401: PDNENASIVT VVGKTFDELV LNSQENVLLE VHTPWCVNCE AMSKQVVKLA KHFKGFENLV FARIDASTNE HAKLQVNDYP TILLYKSGEK EEPLKLSTKL
501: SAKDMAVFIN EELKPRGGSA KDEL
Best Arabidopsis Sequence Match ( AT1G52260.1 )
(BLAST)
001: MSLIPKPISK VSTFTFILLI LLSFTIIIAY SSPDSNVESN EPGFDSDLDQ LLAVDEQLQE DRPEQQSEAE TVSKAQRIVL ELNGDYTKRV IDGNEFVMVL
101: GYAPWCARSA ELMPRFAEAA TALKEIGSSV LMAKIDGDRY SKIASELEIK GFPTLLLFVN GTSLTYNGGS SAEDIVIWVQ KKTGAPIITL NTVDEAPRFL
201: DKYHTFVLGL FEKFEGSEHN EFVKAAKSDD EIQFIETRDS DVAKLLFPDL KSNNVFIGLV KPEAERYTVY DGSYKMEKIL EFLGSNKFPL FTKLTETNTV
301: WVYSSPVKLQ VMLFSKADDF QKLAQPLEDI ARKFKSKLMF IYVDITNENL AMPFLILFGI EAGNKTVVAA FDNNLNSKYL LESDPSPNSI EEFCSGLAHG
401: TVSRYYRSEP VPDNENASIV TVVGKTFDGL VLNSRENVLL EVHTPWCVNC EALSKQIEKL AKHFKGFENL VFARIDASAN EHTKLQVDDK YPIILLYKSG
501: EKEKPLKLST KLSAKDIAVF INEELLKPKN GSAKDEL
Arabidopsis Description
PDIL1-5Protein disulfide isomerase-like 1-5 [Source:UniProtKB/Swiss-Prot;Acc:A3KPF5]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.