Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 7
  • vacuole 6
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY47529 Canola endoplasmic reticulum 94.87 94.87
Bra014319.1-P Field mustard endoplasmic reticulum 73.19 93.22
CDY68572 Canola endoplasmic reticulum 83.46 83.78
CDY52981 Canola endoplasmic reticulum 83.08 82.61
AT1G52260.1 Thale cress endoplasmic reticulum 82.51 80.82
PGSC0003DMT400006756 Potato endoplasmic reticulum 59.89 58.55
KRH23443 Soybean endoplasmic reticulum 54.94 58.27
KRH09876 Soybean endoplasmic reticulum 57.79 58.13
Solyc03g120720.2.1 Tomato plastid 59.13 57.81
VIT_09s0002g04250.t01 Wine grape endoplasmic reticulum 58.94 57.73
GSMUA_Achr10P... Banana endoplasmic reticulum 52.85 51.48
Zm00001d045218_P002 Maize endoplasmic reticulum 50.19 49.91
Os06t0163400-01 Rice plasma membrane 49.05 48.41
EER87912 Sorghum endoplasmic reticulum 49.24 47.52
TraesCS7D01G121800.1 Wheat endoplasmic reticulum 48.67 47.06
TraesCS7A01G123900.1 Wheat endoplasmic reticulum 48.29 46.95
TraesCS7B01G022800.1 Wheat endoplasmic reticulum 48.48 45.95
HORVU7Hr1G026030.1 Barley cytosol 38.4 34.47
CDY09193 Canola endoplasmic reticulum 30.61 27.43
CDY01314 Canola endoplasmic reticulum 25.86 27.42
CDX96575 Canola endoplasmic reticulum 26.05 27.35
CDY38821 Canola cytosol, endoplasmic reticulum 25.67 27.0
CDY53631 Canola endoplasmic reticulum 30.23 26.68
CDY00400 Canola endoplasmic reticulum 25.48 26.59
CDX73422 Canola endoplasmic reticulum 29.09 26.56
CDY31525 Canola endoplasmic reticulum 30.04 26.51
CDY56958 Canola endoplasmic reticulum 28.71 26.08
CDY04673 Canola endoplasmic reticulum 23.76 25.1
CDY38344 Canola endoplasmic reticulum 24.33 25.05
CDX87514 Canola endoplasmic reticulum 23.76 24.56
CDY40898 Canola endoplasmic reticulum 23.76 24.51
CDY08176 Canola endoplasmic reticulum 23.19 24.5
CDX88376 Canola cytosol, endoplasmic reticulum 23.57 24.27
CDY53400 Canola endoplasmic reticulum 14.45 22.49
CDX93606 Canola endoplasmic reticulum 6.08 22.22
CDX95112 Canola endoplasmic reticulum 6.08 22.22
CDX79207 Canola cytosol 4.75 20.66
CDY57723 Canola endoplasmic reticulum 13.5 19.67
CDX95726 Canola endoplasmic reticulum 13.5 19.61
CDX80106 Canola endoplasmic reticulum 13.31 19.39
CDX83326 Canola endoplasmic reticulum 13.12 19.06
CDY18278 Canola endoplasmic reticulum 15.02 18.12
CDX79497 Canola endoplasmic reticulum 14.45 17.16
CDY37102 Canola endoplasmic reticulum 14.07 17.01
CDX73337 Canola endoplasmic reticulum 13.88 16.78
CDY12149 Canola endoplasmic reticulum 13.88 16.48
CDY52544 Canola endoplasmic reticulum 13.88 16.44
CDX95413 Canola cytosol 5.89 12.97
Protein Annotations
Gene3D:3.40.30.10MapMan:50.5.3GO:A0A078EKK8EnsemblPlants:CDY02550ProteinID:CDY02550ProteinID:CDY02550.1
GO:GO:0005575GO:GO:0005623GO:GO:0008150GO:GO:0009987GO:GO:0019725GO:GO:0045454
EnsemblPlantsGene:GSBRNA2T00114231001InterPro:IPR013766PFAM:PF00085PFAM:PF13848PFscan:PS51352PANTHER:PTHR18929
PANTHER:PTHR18929:SF121SUPFAM:SSF52833SignalP:SignalP-noTMTMHMM:TMhelixInterPro:Thioredoxin-like_sfInterPro:Thioredoxin_domain
UniParc:UPI0004EDDE4DSEG:seg::::
Description
BnaA08g01570D
Coordinates
chrLK031935:-:1031763..1034869
Molecular Weight (calculated)
58872.0 Da
IEP (calculated)
4.737
GRAVY (calculated)
-0.189
Length
526 amino acids
Sequence
(BLAST)
001: MSMNPKLSVS TFILLLLLTF LLIPSHSSSS DEESDDDLEQ LLAVDEQSQE DRPQHQQSEA ETVSKAQRIV LELSGDNAKR VVDGNEFVLV LGYAPWCARS
101: ADLMPRFSEA ATGLKEIGSS VLMAKIDGDR YGKVASEIEI KGFPTLLLFV NGTSQPYNGG FSAEDIVIWV QKKTGSPIST VNTLDEAQIF LNKYHTFVVG
201: LFHKFEGSEY NEFVKAAKSD NEIQFVETSD NDVAKLLFPH LKTNTVFIGL VKPEAEKYTA YDGPYKMEKL LEFLGNNKFP LITRLTESNT VWVYSSPVKL
301: QVMIFSKADV FQNLAQSLED LARKFKSKLM FIYVDITNEN LAMPFLTLFG IDHANKTIVA AFDNNLNSKY LLDSDPSPSN IEEFCSGLAD GTVSRYYRSE
401: PVPDNENASI VTVVGKSFDE LVLHSHENVI LEVHTPWCVN CEAMSKQVLK LAKHFKGFEN LVFARIDASV NEHAKLQVDD FPTILFYKSG EKENPLKLST
501: KLSAKDMAVF INEELKPKEG SARDEL
Best Arabidopsis Sequence Match ( AT1G52260.1 )
(BLAST)
001: MSLIPKPISK VSTFTFILLI LLSFTIIIAY SSPDSNVESN EPGFDSDLDQ LLAVDEQLQE DRPEQQSEAE TVSKAQRIVL ELNGDYTKRV IDGNEFVMVL
101: GYAPWCARSA ELMPRFAEAA TALKEIGSSV LMAKIDGDRY SKIASELEIK GFPTLLLFVN GTSLTYNGGS SAEDIVIWVQ KKTGAPIITL NTVDEAPRFL
201: DKYHTFVLGL FEKFEGSEHN EFVKAAKSDD EIQFIETRDS DVAKLLFPDL KSNNVFIGLV KPEAERYTVY DGSYKMEKIL EFLGSNKFPL FTKLTETNTV
301: WVYSSPVKLQ VMLFSKADDF QKLAQPLEDI ARKFKSKLMF IYVDITNENL AMPFLILFGI EAGNKTVVAA FDNNLNSKYL LESDPSPNSI EEFCSGLAHG
401: TVSRYYRSEP VPDNENASIV TVVGKTFDGL VLNSRENVLL EVHTPWCVNC EALSKQIEKL AKHFKGFENL VFARIDASAN EHTKLQVDDK YPIILLYKSG
501: EKEKPLKLST KLSAKDIAVF INEELLKPKN GSAKDEL
Arabidopsis Description
PDIL1-5Protein disulfide isomerase-like 1-5 [Source:UniProtKB/Swiss-Prot;Acc:A3KPF5]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.