Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 8
- vacuole 5
- plasma membrane 5
- golgi 5
- plastid 1
- nucleus 1
- peroxisome 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27800704
plastid: 27992503 |
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID:
27992503
doi
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d045218_P002 | Maize | endoplasmic reticulum | 81.24 | 81.85 |
TraesCS7D01G121800.1 | Wheat | endoplasmic reticulum | 82.55 | 80.88 |
TraesCS7A01G123900.1 | Wheat | endoplasmic reticulum | 81.24 | 80.04 |
TraesCS7B01G022800.1 | Wheat | endoplasmic reticulum | 82.74 | 79.46 |
EER87912 | Sorghum | endoplasmic reticulum | 81.24 | 79.45 |
GSMUA_Achr10P... | Banana | endoplasmic reticulum | 60.41 | 59.63 |
HORVU7Hr1G026030.1 | Barley | cytosol | 64.17 | 58.36 |
VIT_09s0002g04250.t01 | Wine grape | endoplasmic reticulum | 53.1 | 52.7 |
KRH23443 | Soybean | endoplasmic reticulum | 48.78 | 52.42 |
KRH09876 | Soybean | endoplasmic reticulum | 50.66 | 51.63 |
PGSC0003DMT400006756 | Potato | endoplasmic reticulum | 50.66 | 50.19 |
Bra018958.1-P | Field mustard | endoplasmic reticulum | 49.53 | 49.91 |
CDY52981 | Canola | endoplasmic reticulum | 49.34 | 49.72 |
Solyc03g120720.2.1 | Tomato | plastid | 49.91 | 49.44 |
CDY47529 | Canola | endoplasmic reticulum | 48.41 | 49.05 |
CDY02550 | Canola | endoplasmic reticulum | 48.41 | 49.05 |
CDY68572 | Canola | endoplasmic reticulum | 48.22 | 49.05 |
AT1G52260.1 | Thale cress | endoplasmic reticulum | 47.65 | 47.3 |
AT3G16110.1 | Thale cress | endoplasmic reticulum | 47.28 | 47.19 |
Bra014319.1-P | Field mustard | endoplasmic reticulum | 36.02 | 46.49 |
Os02t0100100-01 | Rice | plasma membrane | 29.27 | 27.71 |
Os04t0436300-01 | Rice | endoplasmic reticulum | 12.95 | 23.55 |
Os11t0199200-01 | Rice | extracellular, plasma membrane | 21.76 | 22.66 |
Os02t0554900-01 | Rice | plastid | 22.33 | 21.83 |
Os02t0550300-00 | Rice | endoplasmic reticulum | 14.63 | 18.4 |
Os05t0156300-01 | Rice | plasma membrane | 12.2 | 17.71 |
Os04t0432500-01 | Rice | plasma membrane | 13.7 | 17.26 |
Os01t0339900-01 | Rice | plasma membrane | 12.01 | 17.25 |
Os09t0451500-02 | Rice | plasma membrane | 14.07 | 17.01 |
Os03t0287900-01 | Rice | endoplasmic reticulum | 4.5 | 16.33 |
Protein Annotations
Gene3D:3.40.30.10 | EntrezGene:4340223 | MapMan:50.5.3 | EMBL:AK073970 | ProteinID:BAD67648.1 | ProteinID:BAF18810.1 |
ProteinID:BAS96309.1 | GO:GO:0003674 | GO:GO:0003756 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005788 | GO:GO:0006457 | GO:GO:0006950 |
GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016853 | GO:GO:0019725 | GO:GO:0034976 | GO:GO:0045454 |
InterPro:IPR013766 | EnsemblPlantsGene:Os06g0163400 | EnsemblPlants:Os06t0163400-01 | PFAM:PF00085 | PFAM:PF13848 | PFscan:PS51352 |
PANTHER:PTHR18929 | PANTHER:PTHR18929:SF121 | UniProt:Q5WA72 | SUPFAM:SSF52833 | SignalP:SignalP-noTM | TMHMM:TMhelix |
InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI0000457949 | RefSeq:XP_015642967.1 | SEG:seg | : |
Description
PROTEIN DISULFIDE ISOMERASE-LIKE 1;5, PROTEIN DISULFIDE ISOMERASE-LIKE 1-5, PDI-like protein 1-5Thioredoxin domain 2 containing protein. (Os06t0163400-01)
Coordinates
chr6:+:3199376..3203918
Molecular Weight (calculated)
59035.4 Da
IEP (calculated)
4.592
GRAVY (calculated)
-0.192
Length
533 amino acids
Sequence
(BLAST)
(BLAST)
001: MRARRVVAAA AVLLLFAVVA VARLDLDDDG DDSEVLDELL AVDEEEERGE LGGGGEAAAA EAVRRAQSMV LVLDNDNARR AVEENAEVLL LGYAPWCERS
101: AQLMPRFAEA AAALRAMGSA VAFAKLDGER YPKAASAVGV KGFPTVLLFV NGTEHQFTGL HTKDAIVTWV RKKTGAPASR IQSKDSAEEF LKKDQTFAVG
201: LFKNFEGAEY EEFVKAATSE NEVQFVETND RNVAKILFPG IASEEQFLGL VKSEPEKFEK FNGAFEEKEI IQFVELNKFP LITVFTDLNS GKVYGSPIKL
301: QVFTFAEAYD FEDLESMIQE VARGFKTKIM LIYVDTAEEK LAKPFLTLYG LEPEKPTVTA FDTSKGTKYL MEAEINAKNL QDFCLSLLEG TLPPYFRSEP
401: VPEEKGPIEK VVGRTFDSSV LESPQNVFLE VHAPWCVDCE AISKNVEKLA KHFNDLGQTN LKFARIDASV NEHPKLQINN YPTLLLYPAQ DKSNPIKLSK
501: KSNLKDMAKF VKEKLQIADV ETVAAGDIVK DEL
101: AQLMPRFAEA AAALRAMGSA VAFAKLDGER YPKAASAVGV KGFPTVLLFV NGTEHQFTGL HTKDAIVTWV RKKTGAPASR IQSKDSAEEF LKKDQTFAVG
201: LFKNFEGAEY EEFVKAATSE NEVQFVETND RNVAKILFPG IASEEQFLGL VKSEPEKFEK FNGAFEEKEI IQFVELNKFP LITVFTDLNS GKVYGSPIKL
301: QVFTFAEAYD FEDLESMIQE VARGFKTKIM LIYVDTAEEK LAKPFLTLYG LEPEKPTVTA FDTSKGTKYL MEAEINAKNL QDFCLSLLEG TLPPYFRSEP
401: VPEEKGPIEK VVGRTFDSSV LESPQNVFLE VHAPWCVDCE AISKNVEKLA KHFNDLGQTN LKFARIDASV NEHPKLQINN YPTLLLYPAQ DKSNPIKLSK
501: KSNLKDMAKF VKEKLQIADV ETVAAGDIVK DEL
001: MLTKPKPNSK FSILFTFLLL LSFLIFVARS SDVAVEAGSE EELDDLEQLL AVDEQLQEER PEQQSEAETV SKAQRIVVEL NGDNTKRLID GNEYVMVLGY
101: APWCARSAEL MPRFAEAATD LKEIGSSVLM AKIDGERYSK VASQLEIKGF PTLLLFVNGT SQSYTGGFSS EEIVIWVQKK TGASTIKLDT VDEASGFLKK
201: HHTFILGLFE KSEDSSGHDE FVKAASLDNE IQFVETSSID VAKLLFPNLK TNNVFVGLVK TEAEKYTSYD GPCQAEKIVE FLNSNKFPLV TKLTESNTVR
301: VYSSPVKLQV MVFSKTDDFE SLAQPLEDIA RKFKSKLMLI YIDISNENLA MPFLTLFGIE DAKKTVVAAF DNNLNSKYLL ESDPSPSNIE EFCFGLAHGT
401: VSAYYKSQPI PDNQNASVVA VVGRTFDEVV LRSSENVLLE VHTPWCINCE ALSKQVEKLS QHFKGFENLV FARIDASANE HPKLTVDDYP TILLYKTGEK
501: ENPLKLSTKS SAKDMAVLIN KELKWKDQSG KDEL
101: APWCARSAEL MPRFAEAATD LKEIGSSVLM AKIDGERYSK VASQLEIKGF PTLLLFVNGT SQSYTGGFSS EEIVIWVQKK TGASTIKLDT VDEASGFLKK
201: HHTFILGLFE KSEDSSGHDE FVKAASLDNE IQFVETSSID VAKLLFPNLK TNNVFVGLVK TEAEKYTSYD GPCQAEKIVE FLNSNKFPLV TKLTESNTVR
301: VYSSPVKLQV MVFSKTDDFE SLAQPLEDIA RKFKSKLMLI YIDISNENLA MPFLTLFGIE DAKKTVVAAF DNNLNSKYLL ESDPSPSNIE EFCFGLAHGT
401: VSAYYKSQPI PDNQNASVVA VVGRTFDEVV LRSSENVLLE VHTPWCINCE ALSKQVEKLS QHFKGFENLV FARIDASANE HPKLTVDDYP TILLYKTGEK
501: ENPLKLSTKS SAKDMAVLIN KELKWKDQSG KDEL
Arabidopsis Description
PDIL1-6PDIL1-6 [Source:UniProtKB/TrEMBL;Acc:A0A178VNL8]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.