Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 7
- golgi 5
- extracellular 5
- vacuole 4
- plasma membrane 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G52260.1 | Thale cress | endoplasmic reticulum | 77.9 | 77.47 |
| KRH09876 | Soybean | endoplasmic reticulum | 59.18 | 60.42 |
| VIT_09s0002g04250.t01 | Wine grape | endoplasmic reticulum | 60.67 | 60.34 |
| PGSC0003DMT400006756 | Potato | endoplasmic reticulum | 60.67 | 60.22 |
| KRH23443 | Soybean | endoplasmic reticulum | 55.81 | 60.08 |
| Solyc03g120720.2.1 | Tomato | plastid | 59.74 | 59.29 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 51.87 | 51.3 |
| Zm00001d045218_P002 | Maize | endoplasmic reticulum | 49.25 | 49.72 |
| EER87912 | Sorghum | endoplasmic reticulum | 48.5 | 47.52 |
| Os06t0163400-01 | Rice | plasma membrane | 47.19 | 47.28 |
| TraesCS7D01G121800.1 | Wheat | endoplasmic reticulum | 47.75 | 46.88 |
| TraesCS7A01G123900.1 | Wheat | endoplasmic reticulum | 46.82 | 46.21 |
| TraesCS7B01G022800.1 | Wheat | endoplasmic reticulum | 47.38 | 45.59 |
| HORVU7Hr1G026030.1 | Barley | cytosol | 38.2 | 34.81 |
| AT3G54960.1 | Thale cress | endoplasmic reticulum | 29.96 | 27.63 |
| AT5G60640.1 | Thale cress | endoplasmic reticulum | 30.34 | 27.14 |
| AT1G21750.1 | Thale cress | endoplasmic reticulum | 24.53 | 26.15 |
| AT1G77510.1 | Thale cress | endoplasmic reticulum | 23.03 | 24.21 |
| AT1G07960.4 | Thale cress | endoplasmic reticulum | 5.99 | 21.92 |
| AT2G47470.1 | Thale cress | endoplasmic reticulum | 13.67 | 20.22 |
| AT1G35620.1 | Thale cress | endoplasmic reticulum | 13.11 | 15.91 |
| AT1G04980.1 | Thale cress | endoplasmic reticulum | 12.73 | 15.21 |
| AT2G32920.1 | Thale cress | endoplasmic reticulum | 12.36 | 15.0 |
Protein Annotations
| Gene3D:3.40.30.10 | MapMan:50.5.3 | EntrezGene:820856 | UniProt:A0A178VNL8 | ProteinID:AEE75772.1 | EMBL:AK221388 |
| ArrayExpress:AT3G16110 | EnsemblPlantsGene:AT3G16110 | RefSeq:AT3G16110 | TAIR:AT3G16110 | RefSeq:AT3G16110-TAIR-G | EnsemblPlants:AT3G16110.1 |
| TAIR:AT3G16110.1 | Symbol:ATPDIL1-6 | Unigene:At.50187 | ProteinID:BAB02677.1 | EMBL:BT015349 | EMBL:BT015798 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003756 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005788 | GO:GO:0006457 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016853 | GO:GO:0019725 | GO:GO:0034976 | GO:GO:0045454 |
| InterPro:IPR013766 | RefSeq:NP_188232.2 | ProteinID:OAP06663.1 | PFAM:PF00085 | PFAM:PF13848 | PO:PO:0000005 |
| PO:PO:0000013 | PO:PO:0000014 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PFscan:PS51352 | PANTHER:PTHR18929 | PANTHER:PTHR18929:SF121 | UniProt:Q66GQ3 |
| SUPFAM:SSF52833 | SignalP:SignalP-noTM | TMHMM:TMhelix | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI000034EF3D |
| SEG:seg | : | : | : | : | : |
Description
PDIL1-6PDIL1-6 [Source:UniProtKB/TrEMBL;Acc:A0A178VNL8]
Coordinates
chr3:-:5460793..5463899
Molecular Weight (calculated)
59573.9 Da
IEP (calculated)
4.660
GRAVY (calculated)
-0.197
Length
534 amino acids
Sequence
(BLAST)
(BLAST)
001: MLTKPKPNSK FSILFTFLLL LSFLIFVARS SDVAVEAGSE EELDDLEQLL AVDEQLQEER PEQQSEAETV SKAQRIVVEL NGDNTKRLID GNEYVMVLGY
101: APWCARSAEL MPRFAEAATD LKEIGSSVLM AKIDGERYSK VASQLEIKGF PTLLLFVNGT SQSYTGGFSS EEIVIWVQKK TGASTIKLDT VDEASGFLKK
201: HHTFILGLFE KSEDSSGHDE FVKAASLDNE IQFVETSSID VAKLLFPNLK TNNVFVGLVK TEAEKYTSYD GPCQAEKIVE FLNSNKFPLV TKLTESNTVR
301: VYSSPVKLQV MVFSKTDDFE SLAQPLEDIA RKFKSKLMLI YIDISNENLA MPFLTLFGIE DAKKTVVAAF DNNLNSKYLL ESDPSPSNIE EFCFGLAHGT
401: VSAYYKSQPI PDNQNASVVA VVGRTFDEVV LRSSENVLLE VHTPWCINCE ALSKQVEKLS QHFKGFENLV FARIDASANE HPKLTVDDYP TILLYKTGEK
501: ENPLKLSTKS SAKDMAVLIN KELKWKDQSG KDEL
101: APWCARSAEL MPRFAEAATD LKEIGSSVLM AKIDGERYSK VASQLEIKGF PTLLLFVNGT SQSYTGGFSS EEIVIWVQKK TGASTIKLDT VDEASGFLKK
201: HHTFILGLFE KSEDSSGHDE FVKAASLDNE IQFVETSSID VAKLLFPNLK TNNVFVGLVK TEAEKYTSYD GPCQAEKIVE FLNSNKFPLV TKLTESNTVR
301: VYSSPVKLQV MVFSKTDDFE SLAQPLEDIA RKFKSKLMLI YIDISNENLA MPFLTLFGIE DAKKTVVAAF DNNLNSKYLL ESDPSPSNIE EFCFGLAHGT
401: VSAYYKSQPI PDNQNASVVA VVGRTFDEVV LRSSENVLLE VHTPWCINCE ALSKQVEKLS QHFKGFENLV FARIDASANE HPKLTVDDYP TILLYKTGEK
501: ENPLKLSTKS SAKDMAVLIN KELKWKDQSG KDEL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.