Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 5
- endoplasmic reticulum 6
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018672.1-P | Field mustard | endoplasmic reticulum | 86.99 | 88.19 |
| CDX93606 | Canola | endoplasmic reticulum | 86.3 | 87.5 |
| CDX95112 | Canola | endoplasmic reticulum | 85.62 | 86.81 |
| KRH10410 | Soybean | endoplasmic reticulum | 67.12 | 69.5 |
| KRH22935 | Soybean | endoplasmic reticulum | 67.12 | 66.67 |
| Solyc11g069690.1.1 | Tomato | extracellular | 56.16 | 65.6 |
| VIT_06s0004g03250.t01 | Wine grape | endoplasmic reticulum | 66.44 | 65.54 |
| EER92421 | Sorghum | endoplasmic reticulum | 67.12 | 65.33 |
| Os03t0287900-01 | Rice | endoplasmic reticulum | 65.75 | 65.31 |
| TraesCS4D01G197000.1 | Wheat | endoplasmic reticulum | 65.07 | 62.91 |
| TraesCS4A01G107900.1 | Wheat | endoplasmic reticulum | 63.7 | 61.59 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 63.01 | 60.53 |
| HORVU4Hr1G056730.1 | Barley | endoplasmic reticulum | 65.07 | 57.93 |
| TraesCS4B01G196700.2 | Wheat | endoplasmic reticulum | 61.64 | 57.69 |
| Zm00001d028726_P001 | Maize | plastid | 67.12 | 53.55 |
| PGSC0003DMT400050665 | Potato | endoplasmic reticulum | 58.22 | 42.08 |
| AT2G47470.1 | Thale cress | endoplasmic reticulum | 32.19 | 13.02 |
| AT1G04980.1 | Thale cress | endoplasmic reticulum | 23.97 | 7.83 |
| AT2G32920.1 | Thale cress | endoplasmic reticulum | 23.29 | 7.73 |
| AT1G21750.1 | Thale cress | endoplasmic reticulum | 24.66 | 7.19 |
| AT1G35620.1 | Thale cress | endoplasmic reticulum | 21.23 | 7.05 |
| AT1G77510.1 | Thale cress | endoplasmic reticulum | 21.92 | 6.3 |
| AT3G16110.1 | Thale cress | endoplasmic reticulum | 21.92 | 5.99 |
| AT1G52260.1 | Thale cress | endoplasmic reticulum | 20.55 | 5.59 |
| AT3G54960.1 | Thale cress | endoplasmic reticulum | 20.55 | 5.18 |
| AT5G60640.1 | Thale cress | endoplasmic reticulum | 19.86 | 4.86 |
Protein Annotations
| Gene3D:3.40.30.10 | MapMan:35.1 | EntrezGene:837311 | UniProt:A0A178WDX4 | ProteinID:AAB07885.1 | ProteinID:AAF79823.1 |
| ProteinID:AEE28218.1 | ProteinID:AEE28219.1 | ProteinID:AEE28220.1 | EMBL:AK117714 | ProteinID:ANM58216.1 | ArrayExpress:AT1G07960 |
| EnsemblPlantsGene:AT1G07960 | RefSeq:AT1G07960 | TAIR:AT1G07960 | RefSeq:AT1G07960-TAIR-G | EnsemblPlants:AT1G07960.4 | Symbol:ATPDIL5-1 |
| Unigene:At.42281 | EMBL:BT004994 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003756 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0006457 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 | GO:GO:0034976 | GO:GO:0045454 |
| InterPro:IPR013766 | RefSeq:NP_001318951.1 | RefSeq:NP_172274.1 | RefSeq:NP_973787.1 | RefSeq:NP_973788.1 | ProteinID:OAP16620.1 |
| PFAM:PF00085 | PFscan:PS51352 | PANTHER:PTHR18929 | PANTHER:PTHR18929:SF180 | UniProt:Q8GYD1 | SUPFAM:SSF52833 |
| SignalP:SignalP-noTM | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI000000C52D | SEG:seg | : |
Description
PDIL5-1PDIL5-1 [Source:UniProtKB/TrEMBL;Acc:A0A178WDX4]
Coordinates
chr1:+:2467189..2469196
Molecular Weight (calculated)
16566.1 Da
IEP (calculated)
4.695
GRAVY (calculated)
-0.122
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLGARLVAP MIILLLFIPI ELVKAEVITL TPETFSDKIK EKDTAWFVKF CVPWCKHCKK LGNLWEDLGK AMEGDDEIEV GEVDCGTSRA VCTKVEIHSY
101: PTFMLFYNGE EVSKYKGKRD VESLKAFVVE ETEKAAEKAQ LEDKEL
101: PTFMLFYNGE EVSKYKGKRD VESLKAFVVE ETEKAAEKAQ LEDKEL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.