CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 2
extracellular 3
endoplasmic reticulum 5
vacuole 4
plasma membrane 3
golgi 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0287900-01	Rice	endoplasmic reticulum	84.0	85.71
TraesCS4D01G197000.1	Wheat	endoplasmic reticulum	80.0	79.47
TraesCS4A01G107900.1	Wheat	endoplasmic reticulum	79.33	78.81
TraesCS4B01G196700.2	Wheat	endoplasmic reticulum	78.0	75.0
Zm00001d028726_P001	Maize	plastid	91.33	74.86
HORVU4Hr1G056730.1	Barley	endoplasmic reticulum	81.33	74.39
GSMUA_Achr10P...	Banana	endoplasmic reticulum	74.0	73.03
VIT_06s0004g03250.t01	Wine grape	endoplasmic reticulum	68.67	69.59
KRH10410	Soybean	endoplasmic reticulum	64.67	68.79
CDX95112	Canola	endoplasmic reticulum	64.67	67.36
CDX93606	Canola	endoplasmic reticulum	64.67	67.36
Bra018672.1-P	Field mustard	endoplasmic reticulum	64.67	67.36
Solyc11g069690.1.1	Tomato	extracellular	56.0	67.2
AT1G07960.4	Thale cress	endoplasmic reticulum	65.33	67.12
KRH22935	Soybean	endoplasmic reticulum	64.67	65.99
PGSC0003DMT400050665	Potato	endoplasmic reticulum	56.67	42.08
EES19066	Sorghum	endoplasmic reticulum	34.67	14.17
EES00714	Sorghum	endoplasmic reticulum	32.0	13.04
EER96832	Sorghum	endoplasmic reticulum	24.0	8.2
EES12182	Sorghum	endoplasmic reticulum	22.0	7.89
KXG28001	Sorghum	endoplasmic reticulum	26.67	7.77
KXG26345	Sorghum	endoplasmic reticulum	24.67	7.14
OQU85098	Sorghum	endoplasmic reticulum	21.33	6.53
EES06089	Sorghum	endoplasmic reticulum	20.67	5.42
EER87912	Sorghum	endoplasmic reticulum	14.67	4.04

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	EntrezGene:8081442	UniProt:C5WNK6	EnsemblPlants:EER92421	ProteinID:EER92421
ProteinID:EER92421.1	GO:GO:0003674	GO:GO:0003756	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150
GO:GO:0009987	GO:GO:0019725	GO:GO:0034976	GO:GO:0045454	InterPro:IPR013766	PFAM:PF00085
PFscan:PS51352	PANTHER:PTHR18929	PANTHER:PTHR18929:SF180	EnsemblPlantsGene:SORBI_3001G408900	SUPFAM:SSF52833	unigene:Sbi.15104
SignalP:SignalP-noTM	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI0001A82C0B	RefSeq:XP_002465423.1	SEG:seg

Description

hypothetical protein

Coordinates

chr1:+:69269305..69272122

Molecular Weight (calculated)

16863.3 Da

IEP (calculated)

5.322

GRAVY (calculated)

-0.151

Length

150 amino acids

Sequence
(BLAST)

001: MDLGATRRGR LPIHLLLASL TVLVVLTVRS SAEVITLTEE TFSDKIKEKD TIWFVKFCVP WCKHCKNLGT LWEDLGKVME GEDEIEIGQV DCGVSKPVCS
101: KVDIHSYPTF KVFYEGEEVA KYKGHRDVES LKNFVLSEAE KAGEAKLQAD

Best Arabidopsis Sequence Match ( AT1G07960.2 )
(BLAST)

001: MTLGARLVAP MIILLLFIPI ELVKAEVITL TPETFSDKIK EKDTAWFVKF CVPWCKHCKK LGNLWEDLGK AMEGDDEIEV GEVDCGTSRA VCTKVEIHSY
101: PTFMLFYNGE EVSKYKGKRD VESLKAFVVE ETEKAAEKAQ LEDKEL

Arabidopsis Description

PDIL5-1PDIL5-1 [Source:UniProtKB/TrEMBL;Acc:A0A178WDX4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.