Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- endoplasmic reticulum 4
- extracellular 2
- vacuole 3
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G197000.1 | Wheat | endoplasmic reticulum | 98.01 | 98.01 |
| TraesCS4B01G196700.2 | Wheat | endoplasmic reticulum | 92.72 | 89.74 |
| HORVU4Hr1G056730.1 | Barley | endoplasmic reticulum | 97.35 | 89.63 |
| Os03t0287900-01 | Rice | endoplasmic reticulum | 79.47 | 81.63 |
| EER92421 | Sorghum | endoplasmic reticulum | 78.81 | 79.33 |
| VIT_06s0004g03250.t01 | Wine grape | endoplasmic reticulum | 67.55 | 68.92 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 68.21 | 67.76 |
| Zm00001d028726_P001 | Maize | plastid | 81.46 | 67.21 |
| KRH10410 | Soybean | endoplasmic reticulum | 61.59 | 65.96 |
| KRH22935 | Soybean | endoplasmic reticulum | 62.25 | 63.95 |
| Bra018672.1-P | Field mustard | endoplasmic reticulum | 60.93 | 63.89 |
| CDX93606 | Canola | endoplasmic reticulum | 60.93 | 63.89 |
| AT1G07960.4 | Thale cress | endoplasmic reticulum | 61.59 | 63.7 |
| Solyc11g069690.1.1 | Tomato | extracellular | 52.32 | 63.2 |
| CDX95112 | Canola | endoplasmic reticulum | 60.26 | 63.19 |
| PGSC0003DMT400050665 | Potato | endoplasmic reticulum | 53.64 | 40.1 |
| TraesCS1A01G097700.1 | Wheat | golgi | 33.11 | 13.62 |
| TraesCS6A01G003200.1 | Wheat | endoplasmic reticulum | 19.21 | 9.86 |
| TraesCS5A01G234400.1 | Wheat | golgi | 25.83 | 8.86 |
| TraesCS6A01G220100.1 | Wheat | golgi | 21.85 | 7.95 |
| TraesCS4A01G214200.2 | Wheat | plastid | 26.49 | 7.77 |
| TraesCS2A01G304300.1 | Wheat | endoplasmic reticulum | 21.19 | 7.75 |
| TraesCS2A01G306500.1 | Wheat | endoplasmic reticulum | 24.5 | 7.16 |
| TraesCS6A01G000600.1 | Wheat | endoplasmic reticulum | 21.85 | 5.7 |
| TraesCS6A01G001100.1 | Wheat | endoplasmic reticulum | 21.19 | 5.5 |
| TraesCS7A01G123900.1 | Wheat | endoplasmic reticulum | 15.89 | 4.44 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G107900.1 | EnsemblPlantsGene:TraesCS4A01G107900 | Gene3D:3.40.30.10 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 |
| GO:GO:0045454 | InterPro:IPR013766 | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | PANTHER:PTHR18929 | PANTHER:PTHR18929:SF183 |
| PFAM:PF00085 | PFscan:PS51352 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF52833 | TMHMM:TMhelix |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4A:-:125039198..125041129
Molecular Weight (calculated)
16913.3 Da
IEP (calculated)
5.092
GRAVY (calculated)
-0.168
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPALRRRSR LPIHLLLVAV TLLAALAARS GAEVITLTEE TFSDKIKEKD TVWFVQFCVP WCKHCKSLGT LWEDLGKVIE GTDEIEIGKV DCGASKPVCS
101: KVDIHSYPTF KVFYDGEEVA KYKGPRDVES LKTFVLNEAE KAGEVRPEDE L
101: KVDIHSYPTF KVFYDGEEVA KYKGPRDVES LKTFVLNEAE KAGEVRPEDE L
001: MTLGARLVAP MIILLLFIPI ELVKAEVITL TPETFSDKIK EKDTAWFVKF CVPWCKHCKK LGNLWEDLGK AMEGDDEIEV GEVDCGTSRA VCTKVEIHSY
101: PTFMLFYNGE EVSKYKGKRD VESLKAFVVE ETEKAAEKAQ LEDKEL
101: PTFMLFYNGE EVSKYKGKRD VESLKAFVVE ETEKAAEKAQ LEDKEL
Arabidopsis Description
PDIL5-1PDIL5-1 [Source:UniProtKB/TrEMBL;Acc:A0A178WDX4]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.