Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 7
- vacuole 5
- plasma membrane 5
- golgi 5
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g069690.1.1 | Tomato | extracellular | 49.51 | 80.0 |
| KRH10410 | Soybean | endoplasmic reticulum | 44.55 | 63.83 |
| KRH22935 | Soybean | endoplasmic reticulum | 44.55 | 61.22 |
| VIT_06s0004g03250.t01 | Wine grape | endoplasmic reticulum | 44.55 | 60.81 |
| Bra018672.1-P | Field mustard | endoplasmic reticulum | 42.08 | 59.03 |
| CDX93606 | Canola | endoplasmic reticulum | 41.58 | 58.33 |
| AT1G07960.4 | Thale cress | endoplasmic reticulum | 42.08 | 58.22 |
| CDX95112 | Canola | endoplasmic reticulum | 41.09 | 57.64 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 43.07 | 57.24 |
| EER92421 | Sorghum | endoplasmic reticulum | 42.08 | 56.67 |
| Os03t0287900-01 | Rice | endoplasmic reticulum | 40.59 | 55.78 |
| TraesCS4D01G197000.1 | Wheat | endoplasmic reticulum | 40.1 | 53.64 |
| TraesCS4A01G107900.1 | Wheat | endoplasmic reticulum | 40.1 | 53.64 |
| TraesCS4B01G196700.2 | Wheat | endoplasmic reticulum | 39.11 | 50.64 |
| HORVU4Hr1G056730.1 | Barley | endoplasmic reticulum | 40.59 | 50.0 |
| Zm00001d028726_P001 | Maize | plastid | 41.58 | 45.9 |
| PGSC0003DMT400007185 | Potato | endoplasmic reticulum | 19.8 | 11.14 |
| PGSC0003DMT400001769 | Potato | extracellular | 16.83 | 7.87 |
| PGSC0003DMT400006756 | Potato | endoplasmic reticulum | 16.83 | 6.32 |
| PGSC0003DMT400070983 | Potato | endoplasmic reticulum | 13.37 | 6.22 |
| PGSC0003DMT400067074 | Potato | endoplasmic reticulum | 14.85 | 6.16 |
| PGSC0003DMT400045299 | Potato | endoplasmic reticulum | 14.85 | 6.04 |
| PGSC0003DMT400036388 | Potato | endoplasmic reticulum | 13.37 | 5.52 |
| PGSC0003DMT400010624 | Potato | endoplasmic reticulum | 12.38 | 5.06 |
| PGSC0003DMT400033517 | Potato | endoplasmic reticulum, mitochondrion | 13.86 | 4.97 |
| PGSC0003DMT400020867 | Potato | endoplasmic reticulum | 13.86 | 4.84 |
| PGSC0003DMT400008689 | Potato | endoplasmic reticulum | 11.39 | 4.16 |
| PGSC0003DMT400060279 | Potato | cytosol | 0.99 | 1.1 |
Protein Annotations
| EntrezGene:102598670 | Gene3D:3.40.30.10 | MapMan:35.1 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0019725 | GO:GO:0045454 | InterPro:IPR013766 | UniProt:M1BQN1 | PFAM:PF00085 |
| EnsemblPlantsGene:PGSC0003DMG400019678 | PGSC:PGSC0003DMG400019678 | EnsemblPlants:PGSC0003DMT400050665 | PANTHER:PTHR18929 | PANTHER:PTHR18929:SF180 | SUPFAM:SSF52833 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI000294987A | SEG:seg |
Description
Thioredoxin domain 2; Thioredoxin fold [Source:PGSC_GENE;Acc:PGSC0003DMG400019678]
Coordinates
chr11:-:42010748..42016883
Molecular Weight (calculated)
22889.2 Da
IEP (calculated)
4.476
GRAVY (calculated)
-0.301
Length
202 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRYMNPFSC ILLCCIFLLS SIYIAKAEVI TLTGDTFNDK CHTRVGMTWV WDPYPIWSTS IGYFDQIRGR NFGQIHDICN QNKDYNVAED DPHPPPLPCI
101: GSSVLLILKP FFSKNLGTLW DDLGKTMEGE DEIEVGQVDC GTDKPVCNKV DIHSYPTFKL FYNGEEVAKY QGPRDIESLK VFALEEAEKA ATKAEADDDK
201: EL
101: GSSVLLILKP FFSKNLGTLW DDLGKTMEGE DEIEVGQVDC GTDKPVCNKV DIHSYPTFKL FYNGEEVAKY QGPRDIESLK VFALEEAEKA ATKAEADDDK
201: EL
001: MTLGARLVAP MIILLLFIPI ELVKAEVITL TPETFSDKIK EKDTAWFVKF CVPWCKHCKK LGNLWEDLGK AMEGDDEIEV GEVDCGTSRA VCTKVEIHSY
101: PTFMLFYNGE EVSKYKGKRD VESLKAFVVE ETEKAAEKAQ LEDKEL
101: PTFMLFYNGE EVSKYKGKRD VESLKAFVVE ETEKAAEKAQ LEDKEL
Arabidopsis Description
PDIL5-1PDIL5-1 [Source:UniProtKB/TrEMBL;Acc:A0A178WDX4]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.