Factsheet for PGSC0003DMT400067074

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 8
vacuole 5
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g065320.2.1	Tomato	endoplasmic reticulum	85.42	94.12
PGSC0003DMT400070983	Potato	endoplasmic reticulum	64.89	72.81
VIT_18s0075g00210.t01	Wine grape	endoplasmic reticulum	48.87	60.1
HORVU2Hr1G075810.1	Barley	endoplasmic reticulum	47.84	56.28
TraesCS2B01G321000.1	Wheat	golgi	48.05	56.12
TraesCS2A01G304300.1	Wheat	endoplasmic reticulum	47.43	55.93
AT1G35620.1	Thale cress	endoplasmic reticulum	50.51	55.91
KRH34995	Soybean	endoplasmic reticulum	49.69	55.89
Bra034408.1-P	Field mustard	endoplasmic reticulum	49.28	55.17
CDX73337	Canola	endoplasmic reticulum	49.28	55.17
CDY37102	Canola	endoplasmic reticulum	49.28	55.17
Zm00001d025131_P001	Maize	extracellular, plasma membrane	47.43	55.0
GSMUA_Achr5P17020_001	Banana	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	50.31	54.93
Os04t0432500-01	Rice	plasma membrane	47.64	54.85
EES12182	Sorghum	endoplasmic reticulum	47.02	54.78
GSMUA_Achr3P19080_001	Banana	endoplasmic reticulum, golgi, plasma membrane	48.67	53.5
Zm00001d016786_P001	Maize	plasma membrane	45.17	52.38
Os02t0550300-00	Rice	endoplasmic reticulum	45.17	51.89
Zm00001d003654_P001	Maize	endoplasmic reticulum	46.82	51.58
TraesCS2D01G302900.1	Wheat	endoplasmic reticulum	47.23	51.0
TraesCS6B01G261500.2	Wheat	endoplasmic reticulum	42.51	49.52
TraesCS6A01G220100.1	Wheat	golgi	41.48	48.67
TraesCS6D01G215100.1	Wheat	endoplasmic reticulum	41.48	48.44
HORVU6Hr1G059710.1	Barley	endoplasmic reticulum	41.27	44.87
OQU85098	Sorghum	endoplasmic reticulum	44.35	44.08
PGSC0003DMT400010624	Potato	endoplasmic reticulum	19.1	18.83
PGSC0003DMT400045299	Potato	endoplasmic reticulum	18.07	17.71
PGSC0003DMT400007185	Potato	endoplasmic reticulum	12.53	16.99
PGSC0003DMT400036388	Potato	endoplasmic reticulum	16.63	16.56
PGSC0003DMT400006756	Potato	endoplasmic reticulum	17.25	15.61
PGSC0003DMT400020867	Potato	endoplasmic reticulum	18.48	15.54
PGSC0003DMT400033517	Potato	endoplasmic reticulum, mitochondrion	17.25	14.92
PGSC0003DMT400050665	Potato	endoplasmic reticulum	6.16	14.85
PGSC0003DMT400008689	Potato	endoplasmic reticulum	16.22	14.29
PGSC0003DMT400001769	Potato	extracellular	11.5	12.96
PGSC0003DMT400060279	Potato	cytosol	3.49	9.34

Protein Annotations

MapMan:18.11.1.3	Gene3D:3.40.30.10	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0019725	GO:GO:0045454	InterPro:IPR013766	UniProt:M1CGM8
PFAM:PF00085	PFAM:PF13848	EnsemblPlantsGene:PGSC0003DMG400026074	PGSC:PGSC0003DMG400026074	EnsemblPlants:PGSC0003DMT400067074	PRINTS:PR00421
ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR18929	PANTHER:PTHR18929:SF137	SUPFAM:SSF52833	SignalP:SignalP-noTM
TMHMM:TMhelix	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain	UniParc:UPI000294C177	SEG:seg

Description

Protein disulfide isomerase [Source:PGSC_GENE;Acc:PGSC0003DMG400026074]

Coordinates

chr6:-:46558934..46564911

Molecular Weight (calculated)

54448.0 Da

IEP (calculated)

4.766

GRAVY (calculated)

-0.050

Length

487 amino acids

Sequence
(BLAST)

001: MSFLFIFLLL VLVSWPFITA AETEQQKQQF AVESGKVLEL DESNFDAAIS NFDYILVDFY APWCGHCKRL APQLDKAASI LADLKQPISI AKIDADKYKR
101: VGSKYGIDGY PTLKIFMHGV PTEYYGPRKA DLLVRFLKKF VAADVAILNS DSAISEFVEA AGTSFPIFIG FGLNESAISH FAVKYKKRAW FSVAKDFSDK
201: TMEFYDFDKV PALVARHPNY DEQSIFYGPF EGLLPFGVAQ WFGLGTFMLD VSSSKPLASE SKGFAFWVEL VAPGLPSAEK FVEDYIKQSL LPLTLPITEE
301: NLRLLKDDER KVILTILEDE SDDRSKKLVK LLKAAASANH DFVFVFVGFK QWQGFAESFE VSKKTKLPKM VVWDGDEEYF SVVGSDSIED EDQGSQITQF
401: IQGYKDGNII QKRISSGSFM GFINSMIGIG TVTIIVFVVA VVMIIQSLKE EPVTVGTRDE GDHPSSSTSQ AEARQPLRSG EKQDKED

Best Arabidopsis Sequence Match ( AT1G35620.1 )
(BLAST)

001: MRSLKLLLCW ISFLTLSISI SASSDDQFTL DGTVLELTDS NFDSAISTFD CIFVDFYAPW CGHCKRLNPE LDAAAPILAK LKQPIVIAKL NADKYSRLAR
101: KIEIDAFPTL MLYNHGVPME YYGPRKADLL VRYLKKFVAP DVAVLESDST VKEFVEDAGT FFPVFIGFGL NESIISGLGR KYKKKAWFAV SKEVSEDTMV
201: SYDFDKAPAL VANHPTYNEH SVFYGPFEDG FLEEFVKQSF LPLILPINHD TLKLLKDDER KIVLTIVEDE THESLEKLYK ALRAAAHANR DLVFGYVGVK
301: QFEEFVDSFH VDKKTNLPKI VVWDGDEEYD QVTGIETITQ EEDHLTQVSR FLEGYREGRT EKKKINGPSF MGFINSMIGI RSVYILVFLV AVIMMLRSLG
401: QVEEPTGVRT ATAVRERVDQ ATTVPEDESS EHKPSDKKED

Arabidopsis Description

PDIL5-2Protein disulfide-isomerase 5-2 [Source:UniProtKB/Swiss-Prot;Acc:Q94F09]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.