Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G220100.1 | Wheat | golgi | 83.04 | 89.64 |
| TraesCS6B01G261500.2 | Wheat | endoplasmic reticulum | 83.26 | 89.23 |
| TraesCS6D01G215100.1 | Wheat | endoplasmic reticulum | 82.37 | 88.49 |
| Zm00001d016786_P001 | Maize | plasma membrane | 67.86 | 72.38 |
| Os02t0550300-00 | Rice | endoplasmic reticulum | 65.85 | 69.58 |
| HORVU2Hr1G075810.1 | Barley | endoplasmic reticulum | 60.49 | 65.46 |
| OQU85098 | Sorghum | endoplasmic reticulum | 68.3 | 62.45 |
| VIT_18s0075g00210.t01 | Wine grape | endoplasmic reticulum | 46.65 | 52.78 |
| GSMUA_Achr3P19080_001 | Banana | endoplasmic reticulum, golgi, plasma membrane | 50.67 | 51.24 |
| GSMUA_Achr5P17020_001 | Banana | endoplasmic reticulum, golgi, mitochondrion, plasma membrane | 50.0 | 50.22 |
| Solyc11g019920.1.1 | Tomato | plastid, unclear | 47.32 | 48.74 |
| PGSC0003DMT400070983 | Potato | endoplasmic reticulum | 46.88 | 48.39 |
| KRH34995 | Soybean | endoplasmic reticulum | 46.65 | 48.27 |
| Bra034408.1-P | Field mustard | endoplasmic reticulum | 46.43 | 47.82 |
| CDY37102 | Canola | endoplasmic reticulum | 46.43 | 47.82 |
| CDX73337 | Canola | endoplasmic reticulum | 46.21 | 47.59 |
| AT1G35620.1 | Thale cress | endoplasmic reticulum | 46.43 | 47.27 |
| Solyc06g065320.2.1 | Tomato | endoplasmic reticulum | 45.31 | 45.93 |
| PGSC0003DMT400067074 | Potato | endoplasmic reticulum | 44.87 | 41.27 |
| HORVU6Hr1G001640.1 | Barley | endoplasmic reticulum | 13.39 | 20.83 |
| HORVU4Hr1G049820.1 | Barley | cytosol | 7.81 | 19.23 |
| HORVU4Hr1G056730.1 | Barley | endoplasmic reticulum | 6.92 | 18.9 |
| HORVU5Hr1G114600.1 | Barley | endoplasmic reticulum | 11.38 | 17.35 |
| HORVU6Hr1G001800.2 | Barley | endoplasmic reticulum | 11.83 | 17.04 |
| HORVU4Hr1G049880.2 | Barley | mitochondrion, plastid | 10.94 | 16.72 |
| HORVU4Hr1G043910.1 | Barley | extracellular | 20.09 | 16.07 |
| HORVU6Hr1G001700.1 | Barley | endoplasmic reticulum, plastid | 21.65 | 15.28 |
| HORVU1Hr1G022810.1 | Barley | endoplasmic reticulum | 12.5 | 13.9 |
| HORVU4Hr1G034020.1 | Barley | cytosol | 4.02 | 13.74 |
| HORVU4Hr1G048980.2 | Barley | cytosol | 8.93 | 13.7 |
| HORVU2Hr1G076360.1 | Barley | endoplasmic reticulum | 15.62 | 13.46 |
| HORVU5Hr1G067570.1 | Barley | plasma membrane | 12.5 | 10.81 |
| HORVU7Hr1G026030.1 | Barley | cytosol | 13.39 | 10.24 |
Protein Annotations
| MapMan:18.11.1.3 | Gene3D:3.40.30.10 | UniProt:A0A287UBY0 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019725 | GO:GO:0045454 | EnsemblPlantsGene:HORVU6Hr1G059710 |
| EnsemblPlants:HORVU6Hr1G059710.1 | InterPro:IPR013766 | PFAM:PF00085 | PRINTS:PR00421 | ScanProsite:PS00194 | PFscan:PS51352 |
| PANTHER:PTHR18929 | PANTHER:PTHR18929:SF167 | SUPFAM:SSF52833 | SignalP:SignalP-noTM | TMHMM:TMhelix | InterPro:Thioredoxin-like_sf |
| InterPro:Thioredoxin_CS | InterPro:Thioredoxin_domain | UniParc:UPI000B4636B2 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr6H:+:395564331..395567429
Molecular Weight (calculated)
48939.0 Da
IEP (calculated)
5.036
GRAVY (calculated)
-0.027
Length
448 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPMAVDKQW LLVLFVLAFL TPACLASGGE EPARFQIPRD GSVVELDESN FEAALAAVDF LFVDFHAPWC GHCKRLSPQL DEAAPVLAGL STPIVVAKVN
101: AEKYKKLGSK YGVDGFPTLM LFDHGVPTEY TGSRKASQLV ESLRKLVAPD VSLLMSDAAI KSFVQEAGVG FPLFIGFGVD ESSIAEYGAR YKKKAWFSTA
201: KDFSEDMMAV YDFDKIPALV SLNPKYNEQN VFYGPFEGTF LEDFIRPPPP PPLLPITVPF NAETVKMLKD DDRKVVLAVL QDESDETSMR LIKVLRSAAN
301: ANHDLVFGYV GVNQWEEFTE PFHDSKSSQL PKLVVWDKDE EYEVVEGLES LEEGDHGSQI SRFLEAYRAG RTIKKTLGRR SPTLLGMNAL YILLFLVXXX
401: XXXXXCFSPG KATKIASQHE PIKNECVVVF GCRLSLRISC SRRIELML
101: AEKYKKLGSK YGVDGFPTLM LFDHGVPTEY TGSRKASQLV ESLRKLVAPD VSLLMSDAAI KSFVQEAGVG FPLFIGFGVD ESSIAEYGAR YKKKAWFSTA
201: KDFSEDMMAV YDFDKIPALV SLNPKYNEQN VFYGPFEGTF LEDFIRPPPP PPLLPITVPF NAETVKMLKD DDRKVVLAVL QDESDETSMR LIKVLRSAAN
301: ANHDLVFGYV GVNQWEEFTE PFHDSKSSQL PKLVVWDKDE EYEVVEGLES LEEGDHGSQI SRFLEAYRAG RTIKKTLGRR SPTLLGMNAL YILLFLVXXX
401: XXXXXCFSPG KATKIASQHE PIKNECVVVF GCRLSLRISC SRRIELML
001: MRSLKLLLCW ISFLTLSISI SASSDDQFTL DGTVLELTDS NFDSAISTFD CIFVDFYAPW CGHCKRLNPE LDAAAPILAK LKQPIVIAKL NADKYSRLAR
101: KIEIDAFPTL MLYNHGVPME YYGPRKADLL VRYLKKFVAP DVAVLESDST VKEFVEDAGT FFPVFIGFGL NESIISGLGR KYKKKAWFAV SKEVSEDTMV
201: SYDFDKAPAL VANHPTYNEH SVFYGPFEDG FLEEFVKQSF LPLILPINHD TLKLLKDDER KIVLTIVEDE THESLEKLYK ALRAAAHANR DLVFGYVGVK
301: QFEEFVDSFH VDKKTNLPKI VVWDGDEEYD QVTGIETITQ EEDHLTQVSR FLEGYREGRT EKKKINGPSF MGFINSMIGI RSVYILVFLV AVIMMLRSLG
401: QVEEPTGVRT ATAVRERVDQ ATTVPEDESS EHKPSDKKED
101: KIEIDAFPTL MLYNHGVPME YYGPRKADLL VRYLKKFVAP DVAVLESDST VKEFVEDAGT FFPVFIGFGL NESIISGLGR KYKKKAWFAV SKEVSEDTMV
201: SYDFDKAPAL VANHPTYNEH SVFYGPFEDG FLEEFVKQSF LPLILPINHD TLKLLKDDER KIVLTIVEDE THESLEKLYK ALRAAAHANR DLVFGYVGVK
301: QFEEFVDSFH VDKKTNLPKI VVWDGDEEYD QVTGIETITQ EEDHLTQVSR FLEGYREGRT EKKKINGPSF MGFINSMIGI RSVYILVFLV AVIMMLRSLG
401: QVEEPTGVRT ATAVRERVDQ ATTVPEDESS EHKPSDKKED
Arabidopsis Description
PDIL5-2Protein disulfide-isomerase 5-2 [Source:UniProtKB/Swiss-Prot;Acc:Q94F09]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.