Factsheet for HORVU6Hr1G001640.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 3
extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G005700.1	Wheat	endoplasmic reticulum	80.21	82.21
TraesCS6D01G004600.2	Wheat	endoplasmic reticulum	83.68	71.3
TraesCS6B01G005600.1	Wheat	plastid	78.82	70.28
HORVU5Hr1G114600.1	Barley	endoplasmic reticulum	51.39	50.34
HORVU6Hr1G001800.2	Barley	endoplasmic reticulum	50.35	46.62
HORVU4Hr1G034020.1	Barley	cytosol	20.83	45.8
HORVU4Hr1G048980.2	Barley	cytosol	34.03	33.56
HORVU6Hr1G001700.1	Barley	endoplasmic reticulum, plastid	61.81	28.03
HORVU4Hr1G056730.1	Barley	endoplasmic reticulum	10.42	18.29
HORVU4Hr1G049880.2	Barley	mitochondrion, plastid	15.97	15.7
HORVU2Hr1G075810.1	Barley	endoplasmic reticulum	21.88	15.22
HORVU4Hr1G049820.1	Barley	cytosol	9.03	14.29
HORVU6Hr1G059710.1	Barley	endoplasmic reticulum	20.83	13.39
HORVU2Hr1G076360.1	Barley	endoplasmic reticulum	22.22	12.31
HORVU4Hr1G043910.1	Barley	extracellular	22.92	11.79
HORVU1Hr1G022810.1	Barley	endoplasmic reticulum	15.28	10.92
HORVU7Hr1G026030.1	Barley	cytosol	19.79	9.73
HORVU5Hr1G067570.1	Barley	plasma membrane	13.54	7.53
Zm00001d019793_P001	Maize	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU6Hr1G001640.1	EnsemblPlantsGene:HORVU6Hr1G001640	Gene3D:3.40.30.10	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150
GO:GO:0009987	GO:GO:0019725	GO:GO:0045454	InterPro:IPR013766	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain
PANTHER:PTHR18929	PANTHER:PTHR18929:SF121	PFAM:PF00085	PFscan:PS51352	PRINTS:PR00421	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF52833	UniParc:UPI0002951078	UniProt:M0XHY0	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr6H:+:4965464..4967310

Molecular Weight (calculated)

31782.5 Da

IEP (calculated)

7.429

GRAVY (calculated)

0.175

Length

288 amino acids

Sequence
(BLAST)

001: MAVMPMLTPR SVLLMLLLAT PFIILLPHPS RASASLILPV PEVVHVNKAH VVVLTAANFS SFLAVRRHVV VDFYAPWCYW SRKLAPEYAA AASLLSDKGL
101: DVALAMVDST QERQLARAHG VEGYPTVLFF VDGVPKHYPY YGERTKDAMV VWISQRLVPE VQNVTTIDEA EKIITRSGGV AMLAFLDSLS GAHSDELAAA
201: SRLEDMSSLY RAVNFYQTTS RDVAKLFHVD PEAKRPSLVL LNKQEGIKLT GVLYDGEFRA SAIAEFVSAN KIPLITYHPH ARSHPSDV

Best Arabidopsis Sequence Match ( AT5G60640.3 )
(BLAST)

001: MAFRVLLLFS LTALLIFSAV SPSFAASSSD DVDDEDLSFL EDLKEDDVPG ADSLSSSTGF DEFEGGEEED PDMYNDDDDE EGDFSDLGNP DSDPLPTPEI
101: DEKDVVVIKE RNFTDVIENN QYVLVEFYAP WCGHCQSLAP EYAAAATELK EDGVVLAKID ATEENELAQE YRVQGFPTLL FFVDGEHKPY TGGRTKETIV
201: TWVKKKIGPG VYNLTTLDDA EKVLTSGNKV VLGYLNSLVG VEHDQLNAAS KAEDDVNFYQ TVNPDVAKMF HLDPESKRPA LVLVKKEEEK ISHFDGEFVK
301: SALVSFVSAN KLALVSVFTR ETAPEIFESA IKKQLLLFVT KNESEKVLTE FQEAAKSFKG KLKPFYKSDP IPEKNDEDVK IVVGDNFDEI VLDDSKDVLL
401: EVYAPWCGHC QALEPMYNKL AKHLRSIDSL VITKMDGTTN EHPKAKAEGF PTILFFPAGN KTSEPITVDT DRTVVAFYKF LRKHATIPFK LEKPASTESP
501: KTAESTPKVE TTETKESPDS TTKSSQSDSK DEL

Arabidopsis Description

PDIL1-4Protein disulfide-isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178UQB2]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.