Factsheet for HORVU6Hr1G001800.2

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

endoplasmic reticulum 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	endoplasmic reticulum
MultiLoc:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G114600.1	Barley	endoplasmic reticulum	80.06	84.69
TraesCS6A01G003200.1	Wheat	endoplasmic reticulum	72.99	77.21
HORVU6Hr1G001640.1	Barley	endoplasmic reticulum	46.62	50.35
HORVU4Hr1G048980.2	Barley	cytosol	26.05	27.74
HORVU6Hr1G001700.1	Barley	endoplasmic reticulum, plastid	53.05	25.98
HORVU4Hr1G034020.1	Barley	cytosol	10.61	25.19
HORVU4Hr1G056730.1	Barley	endoplasmic reticulum	10.29	19.51
HORVU4Hr1G049880.2	Barley	mitochondrion, plastid	13.5	14.33
HORVU4Hr1G049820.1	Barley	cytosol	8.04	13.74
HORVU2Hr1G075810.1	Barley	endoplasmic reticulum	17.68	13.29
HORVU6Hr1G059710.1	Barley	endoplasmic reticulum	17.04	11.83
HORVU4Hr1G043910.1	Barley	extracellular	20.9	11.61
HORVU2Hr1G076360.1	Barley	endoplasmic reticulum	17.68	10.58
HORVU1Hr1G022810.1	Barley	endoplasmic reticulum	13.5	10.42
HORVU5Hr1G067570.1	Barley	plasma membrane	11.9	7.14
HORVU7Hr1G026030.1	Barley	cytosol	13.18	7.0
Zm00001d019793_P001	Maize	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU6Hr1G001800.2	EnsemblPlantsGene:HORVU6Hr1G001800	Gene3D:3.40.30.10	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150
GO:GO:0009987	GO:GO:0019725	GO:GO:0045454	InterPro:IPR013766	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain
PANTHER:PTHR18929	PANTHER:PTHR18929:SF121	PFAM:PF00085	PFscan:PS51352	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF52833	UniParc:UPI000B46768F	UniProt:A0A287T518	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrchr6H:+:5433196..5435502

Molecular Weight (calculated)

33759.0 Da

IEP (calculated)

5.176

GRAVY (calculated)

-0.062

Length

311 amino acids

Sequence
(BLAST)

001: LPRSKDDTKP QVDRLASKLP RRPCIAVMPI PLALLLLLLP HTSASTTAPD VSLDNIITNA GADAMAGNNS EDGGPAYNRY VQDLFLTDDD DNPEAVDEAH
101: VVVLTAANFS SFVAARRHVM VDFYVPWCSW SRKLAPEYAA AASHLADTGL DVALAKVDVA RNNQLARAHD VLGSPTVYFF VDGAKGYRYY GERTKDAIVA
201: WITKKLGPAV QNIITVDEAE KIVADHGMAV LAFLDSLSGA HSDKLAAASR LEDSINVYQT ASPDVAELFG VDPEARRPLV VMLEADQEGK LTVSRYRRSS
301: LSNLFLNHTL V

Best Arabidopsis Sequence Match ( AT3G54960.1 )
(BLAST)

001: MASSSTSISL LLFVSFILLL VNSRAENASS GSDLDEELAF LAAEESKEQS HGGGSYHEEE HDHQHRDFEN YDDLEQGGGE FHHGDHGYEE EPLPPVDEKD
101: VAVLTKDNFT EFVGNNSFAM VEFYAPWCGA CQALTPEYAA AATELKGLAA LAKIDATEEG DLAQKYEIQG FPTVFLFVDG EMRKTYEGER TKDGIVTWLK
201: KKASPSIHNI TTKEEAERVL SAEPKLVFGF LNSLVGSESE ELAAASRLED DLSFYQTASP DIAKLFEIET QVKRPALVLL KKEEEKLARF DGNFTKTAIA
301: EFVSANKVPL VINFTREGAS LIFESSVKNQ LILFAKANES EKHLPTLREV AKSFKGKFVF VYVQMDNEDY GEAVSGFFGV TGAAPKVLVY TGNEDMRKFI
401: LDGELTVNNI KTLAEDFLAD KLKPFYKSDP LPENNDGDVK VIVGNNFDEI VLDESKDVLL EIYAPWCGHC QSFEPIYNKL GKYLKGIDSL VVAKMDGTSN
501: EHPRAKADGF PTILFFPGGN KSFDPIAVDV DRTVVELYKF LKKHASIPFK LEKPATPEPV ISTMKSDEKI EGDSSKDEL

Arabidopsis Description

PDIL1-3PDIL1-3 [Source:UniProtKB/TrEMBL;Acc:A0A178VF09]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.