Factsheet for Zm00001d019793_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024894_P016	Maize	plastid	100.0	6.12
Zm00001d015747_P022	Maize	plastid	100.0	6.12
Zm00001d037590_P002	Maize	endoplasmic reticulum	95.24	5.29
Zm00001d040766_P001	Maize	plasma membrane	61.9	3.54
Zm00001d020687_P002	Maize	endoplasmic reticulum	23.81	1.13
Zm00001d005866_P003	Maize	endoplasmic reticulum	23.81	1.13
Zm00001d009651_P001	Maize	endoplasmic reticulum	4.76	0.49
Zm00001d016786_P001	Maize	plasma membrane	9.52	0.48
Zm00001d049099_P005	Maize	endoplasmic reticulum	9.52	0.38
Zm00001d007301_P001	Maize	endoplasmic reticulum	9.52	0.36
Zm00001d014912_P003	Maize	extracellular, plasma membrane	4.76	0.18
Zm00001d054106_P003	Maize	endoplasmic reticulum	4.76	0.18
Zm00001d035557_P001	Maize	mitochondrion	0.0	0.0
Zm00001d028726_P001	Maize	plastid	0.0	0.0
Zm00001d041417_P001	Maize	endoplasmic reticulum	0.0	0.0
Zm00001d045218_P002	Maize	endoplasmic reticulum	0.0	0.0
Zm00001d016017_P002	Maize	cytosol	0.0	0.0
Zm00001d028108_P001	Maize	mitochondrion	0.0	0.0
Zm00001d025131_P001	Maize	extracellular, plasma membrane	0.0	0.0
HORVU5Hr1G114600.1	Barley	endoplasmic reticulum	0.0	0.0
Zm00001d003654_P001	Maize	endoplasmic reticulum	0.0	0.0
TraesCS6D01G004600.2	Wheat	endoplasmic reticulum	0.0	0.0
TraesCS6B01G005700.1	Wheat	endoplasmic reticulum	0.0	0.0
TraesCS6B01G005600.1	Wheat	plastid	0.0	0.0
TraesCS6A01G003200.1	Wheat	endoplasmic reticulum	0.0	0.0
HORVU6Hr1G001800.2	Barley	endoplasmic reticulum	0.0	0.0
HORVU6Hr1G001640.1	Barley	endoplasmic reticulum	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d019793_P001	EnsemblPlants:Zm00001d019793_T001	EnsemblPlantsGene:Zm00001d019793	InterPro:ERp29_C_sf	InterPro:IPR036356	ProteinID:ONM53734.1
SUPFAM:SSF47933	UniParc:UPI000843928C	UniProt:A0A1D6I0D0	MapMan:35.2	:	:

Description

SBP-transcription factor 4

Coordinates

chr7:+:62169440..62170161

Molecular Weight (calculated)

2596.1 Da

IEP (calculated)

9.190

GRAVY (calculated)

-1.800

Length

21 amino acids

Sequence
(BLAST)

1: MDKGSDYTKK ETERLHRMLE K

Best Arabidopsis Sequence Match ( AT2G47470.4 )
(BLAST)

001: MAKSQIWFGF ALLALLLVSA VADDVVVLTD DSFEKEVGKD KGALVEFYAP WCGHCKKLAP EYEKLGASFK KAKSVLIAKV DCDEQKSVCT KYGVSGYPTI
101: QWFPKGSLEP QKYEGPRNAE ALAEYVNKEG GTNVKLAAVP QNVVVLTPDN FDEIVLDQNK DVLVEFYAPW CGHCKSLAPT YEKVATVFKQ EEGVVIANLD
201: ADAHKALGEK YGVSGFPTLK FFPKDNKAGH DYDGGRDLDD FVSFINEKSG TSRDSKGQLT SKAGIVESLD ALVKELVAAS EDEKKAVLSR IEKGSDYASK
301: ETERLGRVLG KSISPVKADE LTLKRNILTT FVASS

Arabidopsis Description

PDIL2-1UNE5 [Source:UniProtKB/TrEMBL;Acc:A0A178W1F8]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.