Factsheet for TraesCS6B01G005700.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 4
endoplasmic reticulum 6
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G001640.1	Barley	endoplasmic reticulum	82.21	80.21
TraesCS6D01G004600.2	Wheat	endoplasmic reticulum	88.61	73.67
TraesCS6B01G005600.1	Wheat	plastid	77.22	67.18
TraesCS6B01G005100.1	Wheat	endoplasmic reticulum	54.8	38.31
TraesCS3B01G532200.1	Wheat	endoplasmic reticulum	61.92	29.59
TraesCS6B01G005500.1	Wheat	endoplasmic reticulum	60.85	28.79
TraesCS4B01G196700.2	Wheat	endoplasmic reticulum	11.39	20.51
TraesCS2B01G321000.1	Wheat	golgi	23.49	15.83
TraesCS7B01G022800.1	Wheat	endoplasmic reticulum	27.76	14.05
TraesCS6B01G261500.2	Wheat	endoplasmic reticulum	20.64	13.88
TraesCS4B01G101800.3	Wheat	golgi	23.84	13.09
TraesCS1B01G126100.1	Wheat	endoplasmic reticulum	16.37	12.53
TraesCS2B01G323200.1	Wheat	endoplasmic reticulum	22.78	12.36
TraesCS5B01G232900.1	Wheat	golgi	13.52	8.64
Zm00001d019793_P001	Maize	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS6B01G005700.1	EnsemblPlantsGene:TraesCS6B01G005700	Gene3D:3.40.30.10	GO:GO:0008150	GO:GO:0009987	GO:GO:0019725
GO:GO:0045454	InterPro:IPR013766	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	PANTHER:PTHR18929	PANTHER:PTHR18929:SF121
PFAM:PF00085	PFscan:PS51352	PRINTS:PR00421	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52833
TIGR:cd02961	TIGR:cd02981	TMHMM:TMhelix	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr6B:-:4169776..4171992

Molecular Weight (calculated)

31093.3 Da

IEP (calculated)

7.015

GRAVY (calculated)

0.061

Length

281 amino acids

Sequence
(BLAST)

001: MPTPRSLILL LLLASPIFIL LSHPSSASVS HPDLILPKVV NDIEAHVVVL TAANFSSIFA VRRHVVVDFY APWCYWSRKL APEYAATASH LADKGLDVAL
101: AKVDATQERQ LARAHGVEGY PTVLFFVDGM PKHYPYYGER TKDAMVVWVS QRLVPEVQNV STIYEAEKII TGHSVAVLAF LDSLSGAHSD ELAAASTLED
201: NSSLYRAINF YQTTSPDVAK LFHVDPKAKR PSLVMLKKQE EVKLTVYDGE FRASPIAEFV SANKIPVITY HHHTGSRPSD I

Best Arabidopsis Sequence Match ( AT3G54960.1 )
(BLAST)

001: MASSSTSISL LLFVSFILLL VNSRAENASS GSDLDEELAF LAAEESKEQS HGGGSYHEEE HDHQHRDFEN YDDLEQGGGE FHHGDHGYEE EPLPPVDEKD
101: VAVLTKDNFT EFVGNNSFAM VEFYAPWCGA CQALTPEYAA AATELKGLAA LAKIDATEEG DLAQKYEIQG FPTVFLFVDG EMRKTYEGER TKDGIVTWLK
201: KKASPSIHNI TTKEEAERVL SAEPKLVFGF LNSLVGSESE ELAAASRLED DLSFYQTASP DIAKLFEIET QVKRPALVLL KKEEEKLARF DGNFTKTAIA
301: EFVSANKVPL VINFTREGAS LIFESSVKNQ LILFAKANES EKHLPTLREV AKSFKGKFVF VYVQMDNEDY GEAVSGFFGV TGAAPKVLVY TGNEDMRKFI
401: LDGELTVNNI KTLAEDFLAD KLKPFYKSDP LPENNDGDVK VIVGNNFDEI VLDESKDVLL EIYAPWCGHC QSFEPIYNKL GKYLKGIDSL VVAKMDGTSN
501: EHPRAKADGF PTILFFPGGN KSFDPIAVDV DRTVVELYKF LKKHASIPFK LEKPATPEPV ISTMKSDEKI EGDSSKDEL

Arabidopsis Description

PDIL1-3PDIL1-3 [Source:UniProtKB/TrEMBL;Acc:A0A178VF09]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.