Factsheet for TraesCS6B01G005600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	endoplasmic reticulum, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G001640.1	Barley	endoplasmic reticulum	70.28	78.82
TraesCS6B01G005700.1	Wheat	endoplasmic reticulum	67.18	77.22
TraesCS6B01G005100.1	Wheat	endoplasmic reticulum	51.08	41.04
TraesCS3B01G532200.1	Wheat	endoplasmic reticulum	55.73	30.61
TraesCS6B01G005500.1	Wheat	endoplasmic reticulum	52.94	28.79
TraesCS4B01G196700.2	Wheat	endoplasmic reticulum	9.29	19.23
TraesCS2B01G321000.1	Wheat	golgi	21.05	16.31
TraesCS7B01G022800.1	Wheat	endoplasmic reticulum	24.15	14.05
TraesCS6B01G261500.2	Wheat	endoplasmic reticulum	17.65	13.64
TraesCS4B01G101800.3	Wheat	golgi	21.36	13.48
TraesCS2B01G323200.1	Wheat	endoplasmic reticulum	20.74	12.93
TraesCS1B01G126100.1	Wheat	endoplasmic reticulum	13.0	11.44
TraesCS5B01G232900.1	Wheat	golgi	12.38	9.09
Zm00001d019793_P001	Maize	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS6B01G005600.1	EnsemblPlantsGene:TraesCS6B01G005600	Gene3D:3.40.30.10	GO:GO:0008150	GO:GO:0009987	GO:GO:0019725
GO:GO:0045454	InterPro:IPR013766	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	PANTHER:PTHR18929	PANTHER:PTHR18929:SF121
PFAM:PF00085	PFscan:PS51352	SEG:seg	SUPFAM:SSF52833	TIGR:cd02961	TIGR:cd02981
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr6B:-:4160725..4161966

Molecular Weight (calculated)

35631.5 Da

IEP (calculated)

6.659

GRAVY (calculated)

-0.007

Length

323 amino acids

Sequence
(BLAST)

001: MPMSVEHYSK SSKSPLISLL HLHPLHFPTR THSHSRPAMA TMLMPSPRSL VLLLLLATPF FVLLPHPSSA SSPASLQEYT EEVNEAHVVV LTAANFSSFL
101: DVRRHVVVDL YAPWCYWSRK LAPEYAAAAS HLADKGLDVA LAKVDATQDR QLARAHGVDG YPTVLFFIDG VPRDYSYYGD RTKDAMAMVA WISQRLDPAV
201: QNVTTIGEAE KIINGHGVAV LAFLNSLSGV HSDELAAASR LEDVNSLYRA VNFYQTTNLD VAKLFHVDPE AKRPSLVLLN KQEETFILYD GEFGASAIAE
301: FVSANKIPLI TYHPHRGSHS SDV

Best Arabidopsis Sequence Match ( AT3G54960.1 )
(BLAST)

001: MASSSTSISL LLFVSFILLL VNSRAENASS GSDLDEELAF LAAEESKEQS HGGGSYHEEE HDHQHRDFEN YDDLEQGGGE FHHGDHGYEE EPLPPVDEKD
101: VAVLTKDNFT EFVGNNSFAM VEFYAPWCGA CQALTPEYAA AATELKGLAA LAKIDATEEG DLAQKYEIQG FPTVFLFVDG EMRKTYEGER TKDGIVTWLK
201: KKASPSIHNI TTKEEAERVL SAEPKLVFGF LNSLVGSESE ELAAASRLED DLSFYQTASP DIAKLFEIET QVKRPALVLL KKEEEKLARF DGNFTKTAIA
301: EFVSANKVPL VINFTREGAS LIFESSVKNQ LILFAKANES EKHLPTLREV AKSFKGKFVF VYVQMDNEDY GEAVSGFFGV TGAAPKVLVY TGNEDMRKFI
401: LDGELTVNNI KTLAEDFLAD KLKPFYKSDP LPENNDGDVK VIVGNNFDEI VLDESKDVLL EIYAPWCGHC QSFEPIYNKL GKYLKGIDSL VVAKMDGTSN
501: EHPRAKADGF PTILFFPGGN KSFDPIAVDV DRTVVELYKF LKKHASIPFK LEKPATPEPV ISTMKSDEKI EGDSSKDEL

Arabidopsis Description

PDIL1-3PDIL1-3 [Source:UniProtKB/TrEMBL;Acc:A0A178VF09]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.