Factsheet for Zm00001d041417_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

endoplasmic reticulum 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	endoplasmic reticulum, mitochondrion
MultiLoc:	endoplasmic reticulum
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d001900_P002
Zm00001d002065_P006
Zm00001d026458_P002
Zm00001d026577_P001
Zm00001d038652_P003

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G21750.1	Zm00001d002065_P006	AT1G47128.1	18676877
AT1G21750.1	Zm00001d026458_P002	AT1G47128.1	18676877
AT1G21750.1	Zm00001d001900_P002	AT3G19390.1	18676877
AT1G21750.1	Zm00001d026577_P001	AT3G19390.1	18676877
AT1G21750.1	Zm00001d001900_P002	AT3G19400.1	18676877
AT1G21750.1	Zm00001d026577_P001	AT3G19400.1	18676877
AT1G21750.1	Zm00001d038652_P003	AT5G42980.1	15352244
AT1G21750.1	Zm00001d002065_P006	AT5G43060.1	18676877
AT1G21750.1	Zm00001d026458_P002	AT5G43060.1	18676877

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028108_P001	Maize	mitochondrion	49.77	78.57
Zm00001d016017_P002	Maize	cytosol	59.73	51.76
HORVU4Hr1G049820.1	Barley	cytosol	30.32	36.81
Zm00001d035557_P001	Maize	mitochondrion	42.08	27.11
HORVU4Hr1G049880.2	Barley	mitochondrion, plastid	33.94	25.6
Zm00001d049099_P005	Maize	endoplasmic reticulum	47.96	19.92
Zm00001d007301_P001	Maize	endoplasmic reticulum	45.25	18.21
Solyc06g060290.2.1	Tomato	plastid	35.29	17.81
GSMUA_Achr1P16970_001	Banana	endoplasmic reticulum	38.46	16.77
PGSC0003DMT400010624	Potato	endoplasmic reticulum	36.2	16.19
GSMUA_Achr3P22070_001	Banana	endoplasmic reticulum	37.1	15.95
Solyc06g005940.2.1	Tomato	nucleus, plastid	35.75	15.83
PGSC0003DMT400045299	Potato	endoplasmic reticulum	35.29	15.69
Solyc05g056400.2.1	Tomato	plastid	37.56	15.69
Bra016405.1-P	Field mustard	endoplasmic reticulum	34.84	15.37
AT1G21750.1	Thale cress	endoplasmic reticulum	34.84	15.37
Bra012293.1-P	Field mustard	endoplasmic reticulum	33.94	15.12
Bra017948.1-P	Field mustard	endoplasmic reticulum	32.58	14.46
Bra015665.1-P	Field mustard	endoplasmic reticulum	32.58	14.15
Bra008311.1-P	Field mustard	endoplasmic reticulum	31.22	13.5
AT1G77510.1	Thale cress	endoplasmic reticulum	30.77	13.39
PGSC0003DMT400036388	Potato	endoplasmic reticulum	28.96	13.09
Solyc05g018700.2.1	Tomato	plastid	28.51	12.7
Zm00001d028726_P001	Maize	plastid	7.69	9.29
Zm00001d016786_P001	Maize	plasma membrane	17.19	9.05
Zm00001d025131_P001	Maize	extracellular, plasma membrane	14.93	7.86
Zm00001d003654_P001	Maize	endoplasmic reticulum	14.93	7.47
Zm00001d020687_P002	Maize	endoplasmic reticulum	14.03	7.03
Zm00001d005866_P003	Maize	endoplasmic reticulum	14.03	7.03
Zm00001d054106_P003	Maize	endoplasmic reticulum	18.1	7.01
Zm00001d014912_P003	Maize	extracellular, plasma membrane	17.19	6.77
Zm00001d040766_P001	Maize	plasma membrane	10.86	6.54
Zm00001d045218_P002	Maize	endoplasmic reticulum	15.38	6.43
Zm00001d037590_P002	Maize	endoplasmic reticulum	10.86	6.35
Zm00001d009651_P001	Maize	endoplasmic reticulum	3.62	3.92
Zm00001d015747_P022	Maize	plastid	5.43	3.5
PGSC0003DMT400060279	Potato	cytosol	2.71	3.3
Zm00001d024894_P016	Maize	plastid	4.98	3.21
Zm00001d019793_P001	Maize	cytosol	0.0	0.0

Protein Annotations

MapMan:15.5.3.13	Gene3D:3.40.30.10	UniProt:A0A1D6MVX5	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0008150	GO:GO:0009987	GO:GO:0016853	GO:GO:0019725	GO:GO:0045454
InterPro:IPR006456	InterPro:IPR013766	ProteinID:ONM32957.1	PFAM:PD125774	PFAM:PF00085	PFAM:PF04770
PANTHER:PTHR18929	PANTHER:PTHR18929:SF186	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI000843C1C8
InterPro:ZF_HD_homeobox_Cys/His_dimer	EnsemblPlantsGene:Zm00001d041417	EnsemblPlants:Zm00001d041417_P001	EnsemblPlants:Zm00001d041417_T001	SEG:seg	:

Description

Protein disulfide isomerase-like 1-2

Coordinates

chr3:-:118230787..118232606

Molecular Weight (calculated)

24696.8 Da

IEP (calculated)

7.218

GRAVY (calculated)

-0.105

Length

221 amino acids

Sequence
(BLAST)

001: MPRDSDSLKC AACGCHRSFH RKDDACRRHH QLMLPATTTA SRILLLLPPP HPHYASPPSF LYHGTPSGGG GTATDSSSGT DAELVLGFFF MLLRSVWCLI
101: RTDLVAVLRM DLEVQGFPTI KIFRDQGKNI QEYKGPREAD GIVHYLKKQV GPASKEIKSL EDAAALIDDK KIYIVGIFAE FSGTEFTNFM EVAEKLRSDY
201: DLLGSYSYLI NIWQWALLSI L

Best Arabidopsis Sequence Match ( AT1G77510.1 )
(BLAST)

001: MAFKGFACFS ILLLLSLFVS SIRSEETKEF VLTLDHSNFT ETISKHDFIV VEFYAPWCGH CQKLAPEYEK AASELSSHNP PLALAKIDAS EEANKEFANE
101: YKIQGFPTLK ILRNGGKSVQ DYNGPREAEG IVTYLKKQSG PASVEIKSAD SATEVVGEKN VVAVGVFPKL SGDEFDSFMA LAEKLRADYD FAHTLDAKFL
201: PRGESVEGPA VRLFKPFDEL FVDSKDFNGE ALEKFVKESS IPLVTVFDSD PNNHPYVAKF FESPATKAMM FVNFTGATAE ALKSKYREVA TSNKDQSLAF
301: LVGDAESSQG AFQYFGLEES QVPLIIIQTP DNKKYLKVNV EVDQIESWFK DFQDGKVAVH KKSQPIPAEN NEPVKVVVAE SLDDIVFKSG KNVLIEFYAP
401: WCGHCQKLAP ILDEVALSFQ NDPSVIIAKL DATANDIPSD TFDVKGFPTI YFRSASGNVV VYEGDRTKED FINFVEKNSE KKPTSHGEES TKSEEPKKTE
501: ETAAKDEL

Arabidopsis Description

PDIL1-2Protein disulfide isomerase-like 1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRG3]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.