Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d002065_P006 | Maize | plasma membrane | 89.79 | 92.09 |
| KXG27269 | Sorghum | endoplasmic reticulum | 87.08 | 90.09 |
| TraesCS2D01G513600.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 79.17 | 82.07 |
| TraesCS2B01G540100.2 | Wheat | golgi | 79.17 | 82.07 |
| TraesCS2A01G512100.1 | Wheat | extracellular | 78.75 | 82.0 |
| HORVU2Hr1G113460.2 | Barley | plasma membrane | 79.58 | 78.12 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 71.25 | 72.92 |
| GSMUA_Achr3P01000_001 | Banana | endoplasmic reticulum | 68.96 | 70.58 |
| GSMUA_Achr1P15920_001 | Banana | endoplasmic reticulum | 68.75 | 70.21 |
| VIT_18s0001g09990.t01 | Wine grape | endoplasmic reticulum | 68.12 | 70.02 |
| Bra040749.1-P | Field mustard | endoplasmic reticulum | 66.25 | 69.58 |
| CDY06760 | Canola | endoplasmic reticulum | 66.04 | 69.37 |
| CDY63586 | Canola | endoplasmic reticulum | 66.25 | 69.28 |
| CDY17093 | Canola | endoplasmic reticulum | 65.83 | 69.15 |
| GSMUA_Achr4P12910_001 | Banana | endoplasmic reticulum | 68.12 | 69.13 |
| GSMUA_Achr8P03350_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 47.92 | 69.07 |
| GSMUA_Achr4P06140_001 | Banana | endoplasmic reticulum | 67.29 | 68.87 |
| Bra014057.1-P | Field mustard | endoplasmic reticulum | 65.83 | 68.85 |
| CDY17044 | Canola | endoplasmic reticulum | 65.83 | 68.85 |
| AT1G47128.1 | Thale cress | endoplasmic reticulum | 66.04 | 68.61 |
| CDX71540 | Canola | extracellular | 65.21 | 68.04 |
| CDY22370 | Canola | extracellular | 65.0 | 67.83 |
| AT5G43060.1 | Thale cress | endoplasmic reticulum | 65.42 | 67.82 |
| Bra033657.1-P | Field mustard | extracellular | 64.79 | 67.61 |
| CDY25228 | Canola | extracellular | 64.38 | 67.17 |
| KRH05634 | Soybean | endoplasmic reticulum | 64.38 | 64.92 |
| Zm00001d001900_P002 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 61.46 | 63.44 |
| CDY17193 | Canola | endoplasmic reticulum | 41.67 | 62.89 |
| GSMUA_Achr1P09800_001 | Banana | endoplasmic reticulum | 61.67 | 62.58 |
| KRH15406 | Soybean | nucleus | 64.58 | 62.5 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, extracellular, golgi | 44.58 | 62.39 |
| PGSC0003DMT400020654 | Potato | cytosol | 57.29 | 62.08 |
| Zm00001d026577_P001 | Maize | extracellular, golgi, plasma membrane | 60.42 | 61.7 |
| Solyc12g088670.1.1 | Tomato | endoplasmic reticulum | 59.79 | 61.59 |
| Solyc04g078540.2.1 | Tomato | endoplasmic reticulum | 59.17 | 60.17 |
| CDY27951 | Canola | endoplasmic reticulum | 56.04 | 58.61 |
| KRH61341 | Soybean | endoplasmic reticulum, extracellular, vacuole | 43.75 | 57.22 |
| Zm00001d037301_P001 | Maize | mitochondrion | 24.58 | 55.66 |
| Zm00001d036541_P002 | Maize | extracellular, plasma membrane | 55.21 | 54.98 |
| CDY02431 | Canola | nucleus | 47.29 | 50.56 |
| Zm00001d036542_P001 | Maize | endoplasmic reticulum, golgi | 42.29 | 50.0 |
| Zm00001d013261_P001 | Maize | extracellular | 35.42 | 49.85 |
| Zm00001d045711_P001 | Maize | extracellular | 35.0 | 49.41 |
| Zm00001d045713_P001 | Maize | extracellular | 34.58 | 48.82 |
| Zm00001d011787_P001 | Maize | extracellular | 38.96 | 48.57 |
| Zm00001d004364_P001 | Maize | nucleus | 31.04 | 48.53 |
| Zm00001d042446_P001 | Maize | extracellular | 37.08 | 48.37 |
| Zm00001d035689_P001 | Maize | extracellular | 37.92 | 48.28 |
| Zm00001d037303_P001 | Maize | extracellular | 33.96 | 47.94 |
| Zm00001d007464_P001 | Maize | endoplasmic reticulum | 38.33 | 47.92 |
| Zm00001d045709_P001 | Maize | extracellular | 31.25 | 47.77 |
| Zm00001d025038_P001 | Maize | endoplasmic reticulum, extracellular | 35.0 | 47.73 |
| Zm00001d045708_P001 | Maize | extracellular | 32.29 | 47.11 |
| Zm00001d004371_P001 | Maize | extracellular | 33.96 | 46.97 |
| Zm00001d012120_P001 | Maize | endoplasmic reticulum | 37.08 | 46.97 |
| Zm00001d004355_P001 | Maize | extracellular | 33.12 | 46.36 |
| Zm00001d008796_P001 | Maize | extracellular | 33.12 | 46.36 |
| Zm00001d038650_P001 | Maize | extracellular | 43.33 | 45.22 |
| Zm00001d031971_P002 | Maize | endoplasmic reticulum | 32.08 | 44.51 |
| Zm00001d017834_P001 | Maize | extracellular | 28.12 | 43.41 |
Protein Annotations
| EntrezGene:100283284 | Gene3D:3.10.20.500 | Gene3D:3.90.70.10 | MapMan:50.3.4 | UniProt:A0A1D6JG12 | ProteinID:AQK46680.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 |
| GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 | InterPro:Granulin | InterPro:Granulin_sf | InterPro:IPR037277 |
| PFAM:PF00112 | PFAM:PF00396 | PFAM:PF08246 | PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00639 |
| ScanProsite:PS00640 | PANTHER:PTHR12411 | PANTHER:PTHR12411:SF352 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS |
| InterPro:Pept_his_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | SMART:SM00277 | SMART:SM00645 |
| SMART:SM00848 | SUPFAM:SSF54001 | SUPFAM:SSF57277 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0008446BAC |
| EnsemblPlantsGene:Zm00001d026458 | EnsemblPlants:Zm00001d026458_P002 | EnsemblPlants:Zm00001d026458_T002 | SEG:seg | : | : |
Description
cysteine protease3Cysteine protease 1
Coordinates
chr10:-:146241809..146245690
Molecular Weight (calculated)
51889.4 Da
IEP (calculated)
4.812
GRAVY (calculated)
-0.403
Length
480 amino acids
Sequence
(BLAST)
(BLAST)
001: MGASTTPLAS AAALLLLLLA PLAAAADSMS IVSYGERSEE EARRMYAEWM AAHGRTYNAV GEEERRFEVF RDNLRYVDAH NAAADAGVHS FRLGLNRFAD
101: LTNDEYRATY LGVRSRPQRE RRLGDRYLAG DNEDLPESVD WRAKGAVAEV KDQGSCGSCW AFSTIAAVEG INQIVTGDMI SLSEQELVDC DTSYNQGCNG
201: GLMDYAFEFI INNGGIDTEE DYPYKGTDGR CDVNRKNAKV VTIDSYEDVP ANSEKSLQKA VANQPISVAI EAGGRAFQLY NSVTDTNLAA GFICGPSRTC
301: GTALDHGVTA VGYGTENGKD YWIVKNSWGS SWGESGYVRM ERNIKASSGK CGIAVEPSYP LKKGANPPNP GPTPPSPTPP PTVCDNYYSC PDSTTCCCIY
401: EYGKYCFAWG CCPLEGATCC DDHYSCCPHD YPVCNVKQGT CLMGKDSPLS LSVKATKRTL AKPHWAFPGN TAADGMKSSA
101: LTNDEYRATY LGVRSRPQRE RRLGDRYLAG DNEDLPESVD WRAKGAVAEV KDQGSCGSCW AFSTIAAVEG INQIVTGDMI SLSEQELVDC DTSYNQGCNG
201: GLMDYAFEFI INNGGIDTEE DYPYKGTDGR CDVNRKNAKV VTIDSYEDVP ANSEKSLQKA VANQPISVAI EAGGRAFQLY NSVTDTNLAA GFICGPSRTC
301: GTALDHGVTA VGYGTENGKD YWIVKNSWGS SWGESGYVRM ERNIKASSGK CGIAVEPSYP LKKGANPPNP GPTPPSPTPP PTVCDNYYSC PDSTTCCCIY
401: EYGKYCFAWG CCPLEGATCC DDHYSCCPHD YPVCNVKQGT CLMGKDSPLS LSVKATKRTL AKPHWAFPGN TAADGMKSSA
001: MGFLKPTMAI LFLAMVAVSS AVDMSIISYD EKHGVSTTGG RSEAEVMSIY EAWLVKHGKA QSQNSLVEKD RRFEIFKDNL RFVDEHNEKN LSYRLGLTRF
101: ADLTNDEYRS KYLGAKMEKK GERRTSLRYE ARVGDELPES IDWRKKGAVA EVKDQGGCGS CWAFSTIGAV EGINQIVTGD LITLSEQELV DCDTSYNEGC
201: NGGLMDYAFE FIIKNGGIDT DKDYPYKGVD GTCDQIRKNA KVVTIDSYED VPTYSEESLK KAVAHQPISI AIEAGGRAFQ LYDSGIFDGS CGTQLDHGVV
301: AVGYGTENGK DYWIVRNSWG KSWGESGYLR MARNIASSSG KCGIAIEPSY PIKNGENPPN PGPSPPSPIK PPTQCDSYYT CPESNTCCCL FEYGKYCFAW
401: GCCPLEAATC CDDNYSCCPH EYPVCDLDQG TCLLSKNSPF SVKALKRKPA TPFWSQGRKN IA
101: ADLTNDEYRS KYLGAKMEKK GERRTSLRYE ARVGDELPES IDWRKKGAVA EVKDQGGCGS CWAFSTIGAV EGINQIVTGD LITLSEQELV DCDTSYNEGC
201: NGGLMDYAFE FIIKNGGIDT DKDYPYKGVD GTCDQIRKNA KVVTIDSYED VPTYSEESLK KAVAHQPISI AIEAGGRAFQ LYDSGIFDGS CGTQLDHGVV
301: AVGYGTENGK DYWIVRNSWG KSWGESGYLR MARNIASSSG KCGIAIEPSY PIKNGENPPN PGPSPPSPIK PPTQCDSYYT CPESNTCCCL FEYGKYCFAW
401: GCCPLEAATC CDDNYSCCPH EYPVCDLDQG TCLLSKNSPF SVKALKRKPA TPFWSQGRKN IA
Arabidopsis Description
RD21ARD21A [Source:UniProtKB/TrEMBL;Acc:A0A178WIH7]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.