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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole

Predictor Summary:
  • extracellular 6
  • golgi 5
  • plasma membrane 5
  • endoplasmic reticulum 6
  • vacuole 8
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, vacuole
Any Predictor:secretory
BaCelLo:secretory
EpiLoc:vacuole
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:vacuole
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr1P16970_001
GSMUA_Achr3P22070_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G47128.1 GSMUA_Achr1P16970_001 AT1G21750.1 18676877
AT1G47128.1 GSMUA_Achr3P22070_001 AT1G21750.1 18676877
AT5G43060.1 GSMUA_Achr1P16970_001 AT1G21750.1 18676877
AT5G43060.1 GSMUA_Achr3P22070_001 AT1G21750.1 18676877
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, golgi 85.59 83.09
CDY17193 Canola endoplasmic reticulum 56.46 59.12
GSMUA_Achr10P... Banana endoplasmic reticulum 82.88 58.85
Zm00001d002065_P006 Maize plasma membrane 69.37 49.36
KRH61341 Soybean endoplasmic reticulum, extracellular, vacuole 54.35 49.32
GSMUA_Achr2P04950_001 Banana endoplasmic reticulum, golgi 51.65 49.28
KXG27269 Sorghum endoplasmic reticulum 68.47 49.14
TraesCS2B01G540100.2 Wheat golgi 67.57 48.6
TraesCS2A01G512100.1 Wheat extracellular 67.27 48.59
TraesCS2D01G513600.1 Wheat endoplasmic reticulum, golgi, vacuole 67.27 48.38
GSMUA_Achr1P15920_001 Banana endoplasmic reticulum 67.87 48.09
GSMUA_Achr4P06140_001 Banana endoplasmic reticulum 67.57 47.97
Zm00001d026458_P002 Maize endoplasmic reticulum 69.07 47.92
VIT_18s0001g09990.t01 Wine grape endoplasmic reticulum 66.07 47.11
GSMUA_Achr3P03740_001 Banana endoplasmic reticulum 49.55 46.74
GSMUA_Achr4P12910_001 Banana endoplasmic reticulum 66.07 46.51
GSMUA_Achr3P01000_001 Banana endoplasmic reticulum 65.47 46.48
HORVU2Hr1G113460.2 Barley plasma membrane 68.17 46.42
GSMUA_AchrUn_... Banana endoplasmic reticulum 48.35 44.85
AT1G47128.1 Thale cress endoplasmic reticulum 62.16 44.81
Bra033657.1-P Field mustard extracellular 61.86 44.78
CDX71540 Canola extracellular 61.86 44.78
CDY22370 Canola extracellular 61.86 44.78
Bra040749.1-P Field mustard endoplasmic reticulum 61.26 44.64
CDY63586 Canola endoplasmic reticulum 61.26 44.44
CDY06760 Canola endoplasmic reticulum 60.96 44.42
CDY17093 Canola endoplasmic reticulum 60.96 44.42
AT5G43060.1 Thale cress endoplasmic reticulum 61.56 44.28
CDY17044 Canola endoplasmic reticulum 60.96 44.23
CDY25228 Canola extracellular 60.96 44.13
KRH05634 Soybean endoplasmic reticulum 63.06 44.12
Bra014057.1-P Field mustard endoplasmic reticulum 60.66 44.01
GSMUA_Achr10P... Banana endoplasmic reticulum 46.85 43.82
GSMUA_Achr1P09800_001 Banana endoplasmic reticulum 61.26 43.13
Solyc12g088670.1.1 Tomato endoplasmic reticulum 59.76 42.7
KRH15406 Soybean nucleus 62.16 41.73
GSMUA_Achr3P11680_001 Banana endoplasmic reticulum, vacuole 48.95 41.69
GSMUA_Achr6P13620_001 Banana extracellular, vacuole 41.44 41.57
PGSC0003DMT400020654 Potato cytosol 54.95 41.31
Solyc04g078540.2.1 Tomato endoplasmic reticulum 56.46 39.83
GSMUA_Achr4P17710_001 Banana endoplasmic reticulum, extracellular 46.55 35.23
CDY02431 Canola nucleus 46.25 34.3
CDY27951 Canola endoplasmic reticulum 46.25 33.55
Protein Annotations
Gene3D:3.90.70.10MapMan:50.3.4GO:GO:0003674GO:GO:0003824GO:GO:0006508GO:GO:0008150
GO:GO:0008152GO:GO:0008234GO:GO:0016787GO:GO:0019538EnsemblPlantsGene:GSMUA_Achr8G03350_001EnsemblPlants:GSMUA_Achr8P03350_001
EnsemblPlants:GSMUA_Achr8T03350_001UniProt:M0TM87PFAM:PF00112PFAM:PF08246PRINTS:PR00705ScanProsite:PS00139
ScanProsite:PS00639PANTHER:PTHR12411PANTHER:PTHR12411:SF526InterPro:Papain_like_cys_pep_sfInterPro:Pept_cys_ASInterPro:Pept_his_AS
InterPro:Peptidase_C1AInterPro:Peptidase_C1A_CInterPro:Prot_inhib_I29SMART:SM00645SMART:SM00848SUPFAM:SSF54001
SignalP:SignalP-noTMUniParc:UPI000296D09FSEG:seg:::
Description
Oryzain alpha chain [Source:GMGC_GENE;Acc:GSMUA_Achr8G03350_001]
Coordinates
chr8:+:2327495..2330779
Molecular Weight (calculated)
36533.3 Da
IEP (calculated)
4.635
GRAVY (calculated)
-0.347
Length
333 amino acids
Sequence
(BLAST)
001: MASSLIFLLL AAAVVASAVP DLYMVTSGEG HSEQVSGRSE EEVGLLYLEW VAKHRPSRNA LAEEASRFEV FKDNLRYIDA HNAAADRGEH AFRLGLNRFA
101: DLTNEEYRAK YLGVRAAASR RRRASSEGSN RYRLRDGDDL PDSIDWREKG AVVGVKDQGS CGSCWAFSTI AAVEGINQIV TGDLISLSEQ ELVDCDTYYN
201: QGCNGGLMDY AFEFIINNGG IDTDEDYPYK ARDGTCDTYR KNAHVVAIDA YEDVPVNDEK SLQKAVANQP VSVAIEAGGR TFQLYDTGIF TGSCGTALDH
301: GVTAVGYGSK NGQDYWLVKN SWVWYCNGGL IPH
Best Arabidopsis Sequence Match ( AT1G47128.1 )
(BLAST)
001: MGFLKPTMAI LFLAMVAVSS AVDMSIISYD EKHGVSTTGG RSEAEVMSIY EAWLVKHGKA QSQNSLVEKD RRFEIFKDNL RFVDEHNEKN LSYRLGLTRF
101: ADLTNDEYRS KYLGAKMEKK GERRTSLRYE ARVGDELPES IDWRKKGAVA EVKDQGGCGS CWAFSTIGAV EGINQIVTGD LITLSEQELV DCDTSYNEGC
201: NGGLMDYAFE FIIKNGGIDT DKDYPYKGVD GTCDQIRKNA KVVTIDSYED VPTYSEESLK KAVAHQPISI AIEAGGRAFQ LYDSGIFDGS CGTQLDHGVV
301: AVGYGTENGK DYWIVRNSWG KSWGESGYLR MARNIASSSG KCGIAIEPSY PIKNGENPPN PGPSPPSPIK PPTQCDSYYT CPESNTCCCL FEYGKYCFAW
401: GCCPLEAATC CDDNYSCCPH EYPVCDLDQG TCLLSKNSPF SVKALKRKPA TPFWSQGRKN IA
Arabidopsis Description
RD21ARD21A [Source:UniProtKB/TrEMBL;Acc:A0A178WIH7]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.