Factsheet for GSMUA_Achr4P17710_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 7
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0508300-01	Rice	plasma membrane	66.82	65.33
Zm00001d038650_P001	Maize	extracellular	67.27	64.35
TraesCS1A01G325400.1	Wheat	extracellular	66.14	64.24
TraesCS1D01G327000.1	Wheat	extracellular	66.14	64.1
EES18460	Sorghum	endoplasmic reticulum	66.82	63.64
TraesCS1B01G338500.1	Wheat	endoplasmic reticulum, unclear	65.68	62.55
KRH61098	Soybean	endoplasmic reticulum, extracellular, plasma membrane	61.82	61.96
CDX94938	Canola	extracellular, vacuole	61.59	61.31
Bra019982.1-P	Field mustard	extracellular, golgi	61.59	61.17
CDX93470	Canola	plasma membrane	61.14	60.72
VIT_18s0001g13270.t01	Wine grape	extracellular	59.55	60.09
AT1G09850.1	Thale cress	endoplasmic reticulum	59.55	59.95
PGSC0003DMT400009624	Potato	extracellular	59.32	59.45
HORVU1Hr1G075530.3	Barley	plastid	63.64	55.23
GSMUA_Achr2P04950_001	Banana	endoplasmic reticulum, golgi	38.64	48.71
GSMUA_Achr8P03350_001	Banana	endoplasmic reticulum, extracellular, vacuole	35.23	46.55
GSMUA_Achr3P03740_001	Banana	endoplasmic reticulum	36.59	45.61
GSMUA_Achr1P15920_001	Banana	endoplasmic reticulum	47.73	44.68
GSMUA_Achr6P13620_001	Banana	extracellular, vacuole	33.64	44.58
GSMUA_Achr3P01000_001	Banana	endoplasmic reticulum	47.27	44.35
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	36.14	44.29
GSMUA_Achr10P...	Banana	endoplasmic reticulum	47.05	44.14
GSMUA_Achr4P06140_001	Banana	endoplasmic reticulum	45.68	42.86
GSMUA_Achr4P12910_001	Banana	endoplasmic reticulum	45.91	42.71
GSMUA_Achr10P...	Banana	endoplasmic reticulum	34.55	42.7
GSMUA_Achr3P11680_001	Banana	endoplasmic reticulum, vacuole	37.5	42.2
GSMUA_Achr1P09800_001	Banana	endoplasmic reticulum	44.77	41.65
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, golgi	29.77	38.19
Solyc04g080880.2.1	Tomato	extracellular	59.55	31.01

Protein Annotations

Gene3D:3.10.20.500	Gene3D:3.90.70.10	MapMan:50.3.4	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005783	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008234	GO:GO:0016787	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr4G17710_001	EnsemblPlants:GSMUA_Achr4P17710_001	EnsemblPlants:GSMUA_Achr4T17710_001	InterPro:Granulin	InterPro:Granulin_sf	InterPro:IPR037277
UniProt:M0SPT4	PFAM:PF00112	PFAM:PF00396	PFAM:PF08246	PRINTS:PR00705	ScanProsite:PS00139
ScanProsite:PS00639	ScanProsite:PS00640	PANTHER:PTHR12411	PANTHER:PTHR12411:SF387	InterPro:Papain_like_cys_pep_sf	InterPro:Pept_asp_AS
InterPro:Pept_cys_AS	InterPro:Pept_his_AS	InterPro:Peptidase_C1A	InterPro:Peptidase_C1A_C	InterPro:Prot_inhib_I29	SMART:SM00277
SMART:SM00645	SMART:SM00848	SUPFAM:SSF54001	SUPFAM:SSF57277	SignalP:SignalP-noTM	UniParc:UPI000294CECB
SEG:seg	:	:	:	:	:

Description

Oryzain alpha chain [Source:GMGC_GENE;Acc:GSMUA_Achr4G17710_001]

Coordinates

chr4:+:17867269..17874153

Molecular Weight (calculated)

48161.8 Da

IEP (calculated)

6.162

GRAVY (calculated)

-0.223

Length

440 amino acids

Sequence
(BLAST)

001: MDFPRSLQLS TTLIALLFLR FSSLSFSYSD LFESWIREHG KRYASEEEKL ARFHVFEDNL AFVDAHNAAA NSSYELALNA FADLLPHEFR AARLGLSAGL
101: AVPRANRTAF RGSYGAVPSS VDWSKEGAVT SVKDQGSCGD CWAFSATGAI EGINKIVTGS LVSLSEQELC DCDQSYNSGC NGGLMDYAFK WVIENHGLDT
201: EDDYPYQAKQ RTCLKNKLKR RVVTIDGYKD VPANNEKLLL QAVAQQPVSV GICGSERAFQ LYSKGIFTGP CSTALDHAVL IVGYGSDDGV DYWIVKNSWG
301: KNWGMNGYMH MLRNSGDSQG VCGINMLASF PTKTSPNPPP PPAPGPTKCS ILTYCPAEST CCCSWRVLGL CLSWSCCDLE NAVCCKDNQY CCPYDYPICD
401: TSGKQCLKGN GNSTVTRGIA RKEPFTKVGS WKDLLAAWDP

Best Arabidopsis Sequence Match ( AT1G09850.1 )
(BLAST)

001: MSMSSSSFIS LTFFFLLLVS SSSSSDDISE LFDDWCQKHG KTYGSEEERQ QRIQIFKDNH DFVTQHNLIT NATYSLSLNA FADLTHHEFK ASRLGLSVSA
101: PSVIMASKGQ SLGGSVKVPD SVDWRKKGAV TNVKDQGSCG ACWSFSATGA MEGINQIVTG DLISLSEQEL IDCDKSYNAG CNGGLMDYAF EFVIKNHGID
201: TEKDYPYQER DGTCKKDKLK QKVVTIDSYA GVKSNDEKAL MEAVAAQPVS VGICGSERAF QLYSSGIFSG PCSTSLDHAV LIVGYGSQNG VDYWIVKNSW
301: GKSWGMDGFM HMQRNTENSD GVCGINMLAS YPIKTHPNPP PPSPPGPTKC NLFTYCSSGE TCCCARELFG LCFSWKCCEI ESAVCCKDGR HCCPHDYPVC
401: DTTRSLCLKK TGNFTAIKPF WKKNSSKQLG RFEEWVM

Arabidopsis Description

XBCP3At1g09850 [Source:UniProtKB/TrEMBL;Acc:Q0WVJ5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.