CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 6
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038650_P001	Maize	extracellular	91.34	91.74
TraesCS1A01G325400.1	Wheat	extracellular	79.22	80.79
TraesCS1D01G327000.1	Wheat	extracellular	78.79	80.18
Os05t0508300-01	Rice	plasma membrane	77.92	80.0
TraesCS1B01G338500.1	Wheat	endoplasmic reticulum, unclear	79.22	79.22
HORVU1Hr1G075530.3	Barley	plastid	75.97	69.23
GSMUA_Achr4P17710_001	Banana	endoplasmic reticulum, extracellular	63.64	66.82
Bra019982.1-P	Field mustard	extracellular, golgi	58.01	60.5
AT1G09850.1	Thale cress	endoplasmic reticulum	56.71	59.95
CDX93470	Canola	plasma membrane	57.36	59.82
CDX94938	Canola	extracellular, vacuole	57.14	59.73
PGSC0003DMT400009624	Potato	extracellular	55.84	58.77
VIT_18s0001g13270.t01	Wine grape	extracellular	55.41	58.72
KRH61098	Soybean	endoplasmic reticulum, extracellular, plasma membrane	55.19	58.09
KXG20680	Sorghum	endoplasmic reticulum, extracellular, vacuole	35.5	45.81
KXG27269	Sorghum	endoplasmic reticulum	45.67	45.47
EER88857	Sorghum	endoplasmic reticulum	36.58	45.43
KXG19778	Sorghum	cytosol, nucleus, plastid	29.44	44.16
KXG25862	Sorghum	endoplasmic reticulum	32.03	43.92
KXG25861	Sorghum	endoplasmic reticulum	32.03	43.92
KXG25863	Sorghum	endoplasmic reticulum	32.03	43.92
EES01927	Sorghum	extracellular	35.06	43.9
OQU81188	Sorghum	cytosol, nucleus, plastid	26.19	43.84
EES10463	Sorghum	endoplasmic reticulum	31.82	43.49
EES10461	Sorghum	endoplasmic reticulum	31.6	43.2
EES13064	Sorghum	extracellular, plasma membrane, vacuole	43.51	43.04
EES15197	Sorghum	endoplasmic reticulum	34.63	43.01
KXG21060	Sorghum	endoplasmic reticulum, golgi, vacuole	34.42	42.86
EER90747	Sorghum	endoplasmic reticulum	35.28	42.78
EES09937	Sorghum	endoplasmic reticulum	34.2	42.59
EES11628	Sorghum	extracellular	43.29	42.46
EES02142	Sorghum	vacuole	34.63	42.33
OQU81187	Sorghum	endoplasmic reticulum, extracellular	31.6	42.07
EER93437	Sorghum	endoplasmic reticulum	32.03	41.93
EES07368	Sorghum	extracellular	32.25	41.85
EER88858	Sorghum	golgi, vacuole	35.93	41.81
KXG19775	Sorghum	extracellular	30.52	41.47
EES10550	Sorghum	extracellular	30.52	41.47
EER89590	Sorghum	extracellular	30.52	41.47
KXG19777	Sorghum	extracellular	30.09	40.88
Solyc04g080880.2.1	Tomato	extracellular	55.84	30.53

Protein Annotations

Gene3D:3.10.20.500	Gene3D:3.90.70.10	MapMan:50.3.4	UniProt:C5Z0G3	EnsemblPlants:EES18460	ProteinID:EES18460
ProteinID:EES18460.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005249	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005783	GO:GO:0005886
GO:GO:0005887	GO:GO:0006508	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0008234	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	GO:GO:0019538	GO:GO:0042391
GO:GO:0071805	InterPro:Granulin	InterPro:Granulin_sf	InterPro:IPR037277	PFAM:PF00112	PFAM:PF00396
PFAM:PF08246	PRINTS:PR00705	ScanProsite:PS00139	ScanProsite:PS00639	ScanProsite:PS00640	PANTHER:PTHR12411
PANTHER:PTHR12411:SF387	InterPro:Papain_like_cys_pep_sf	InterPro:Pept_asp_AS	InterPro:Pept_cys_AS	InterPro:Pept_his_AS	InterPro:Peptidase_C1A
InterPro:Peptidase_C1A_C	InterPro:Prot_inhib_I29	SMART:SM00277	SMART:SM00645	SMART:SM00848	EnsemblPlantsGene:SORBI_3009G190600
SUPFAM:SSF54001	SUPFAM:SSF57277	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0003C665CF	SEG:seg

Description

hypothetical protein

Coordinates

chr9:+:54267465..54271808

Molecular Weight (calculated)

48656.5 Da

IEP (calculated)

6.567

GRAVY (calculated)

-0.163

Length

462 amino acids

Sequence
(BLAST)

001: MPSVLHLLLL LLAASAAAAA TAGAGAGAGT SGDPRAYEAL FDAWCAEHGK AYATPEERAA RLAVFADNAA FVAAHNARVN AAGGGGAPPS YTLALNAFAD
101: LTHEEFRAAR LGRIAAGAAA LRSPAAPVYR GLDGGLGAVP DALDWRENGA VTKVKDQGSC GACWSFSATG AMEGINKIKT GSLVSLSEQE LIDCDRSYNS
201: GCGGGLMDYA YKFVVKNGGI DTEEDYPYRE ADGTCNKNKL KKRIVTIDGY SDVPSNKEDL LLQAVAQQPV SVGICGSARA FQLYSQGIFD GPCPTSLDHA
301: VLIVGYGSEG GKDYWIVKNS WGESWGMKGY MHMHRNTGDS KGVCGINMMA SFPTKSSPNP PPSPGPGPTK CSLLTYCPEG STCCCSWRIL GFCLSWSCCE
401: LDNAVCCKDN KSCCPHDYPV CDTDRGLCLK ASGNSSAIEG IRRKRTFSKA PSWTGLVELM DH

Best Arabidopsis Sequence Match ( AT1G09850.1 )
(BLAST)

001: MSMSSSSFIS LTFFFLLLVS SSSSSDDISE LFDDWCQKHG KTYGSEEERQ QRIQIFKDNH DFVTQHNLIT NATYSLSLNA FADLTHHEFK ASRLGLSVSA
101: PSVIMASKGQ SLGGSVKVPD SVDWRKKGAV TNVKDQGSCG ACWSFSATGA MEGINQIVTG DLISLSEQEL IDCDKSYNAG CNGGLMDYAF EFVIKNHGID
201: TEKDYPYQER DGTCKKDKLK QKVVTIDSYA GVKSNDEKAL MEAVAAQPVS VGICGSERAF QLYSSGIFSG PCSTSLDHAV LIVGYGSQNG VDYWIVKNSW
301: GKSWGMDGFM HMQRNTENSD GVCGINMLAS YPIKTHPNPP PPSPPGPTKC NLFTYCSSGE TCCCARELFG LCFSWKCCEI ESAVCCKDGR HCCPHDYPVC
401: DTTRSLCLKK TGNFTAIKPF WKKNSSKQLG RFEEWVM

Arabidopsis Description

XBCP3At1g09850 [Source:UniProtKB/TrEMBL;Acc:Q0WVJ5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.