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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 7
  • vacuole 7
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:plastid, secretory
BaCelLo:secretory
EpiLoc:vacuole
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d013261_P001 Maize extracellular 86.97 90.03
TraesCS5A01G391500.1 Wheat endoplasmic reticulum, extracellular 78.47 80.06
TraesCS5D01G401300.1 Wheat extracellular 78.19 80.0
HORVU5Hr1G095580.1 Barley endoplasmic reticulum, extracellular 77.62 78.51
OQU81187 Sorghum endoplasmic reticulum, extracellular 58.07 59.08
KXG19778 Sorghum cytosol, nucleus, plastid 50.99 58.44
KXG19777 Sorghum extracellular 54.39 56.47
EES10550 Sorghum extracellular 54.11 56.18
KXG19775 Sorghum extracellular 54.11 56.18
EER89590 Sorghum extracellular 53.82 55.88
EES10461 Sorghum endoplasmic reticulum 51.56 53.85
KXG25861 Sorghum endoplasmic reticulum 51.27 53.71
KXG25862 Sorghum endoplasmic reticulum 51.27 53.71
KXG25863 Sorghum endoplasmic reticulum 51.27 53.71
EES10463 Sorghum endoplasmic reticulum 50.99 53.25
OQU81188 Sorghum cytosol, nucleus, plastid 40.23 51.45
CDY58055 Canola golgi, nucleus, plastid 46.74 51.24
Bra021998.1-P Field mustard endoplasmic reticulum 49.58 50.58
CDX87758 Canola endoplasmic reticulum 49.58 50.58
CDY50483 Canola endoplasmic reticulum 49.58 50.58
Bra025046.1-P Field mustard endoplasmic reticulum, extracellular 48.73 50.0
AT5G45890.1 Thale cress endoplasmic reticulum, golgi 48.73 49.71
Solyc02g076910.2.1 Tomato extracellular, golgi 49.01 49.29
PGSC0003DMT400026448 Potato endoplasmic reticulum, extracellular, vacuole 47.59 48.41
CDX77621 Canola endoplasmic reticulum, extracellular 46.46 47.81
EES15197 Sorghum endoplasmic reticulum 47.59 45.16
KXG20680 Sorghum endoplasmic reticulum, extracellular, vacuole 45.04 44.41
EES01927 Sorghum extracellular 45.89 43.9
EES09937 Sorghum endoplasmic reticulum 45.89 43.67
EER90747 Sorghum endoplasmic reticulum 46.46 43.04
EES07368 Sorghum extracellular 43.34 42.98
EER88857 Sorghum endoplasmic reticulum 44.76 42.47
EES02142 Sorghum vacuole 44.76 41.8
EER88858 Sorghum golgi, vacuole 45.61 40.55
KXG21060 Sorghum endoplasmic reticulum, golgi, vacuole 41.36 39.35
KXG27269 Sorghum endoplasmic reticulum 48.73 37.07
EES11628 Sorghum extracellular 44.48 33.33
EES13064 Sorghum extracellular, plasma membrane, vacuole 43.91 33.19
EES18460 Sorghum endoplasmic reticulum 41.93 32.03
Protein Annotations
MapMan:19.4.1.1Gene3D:3.90.70.10EntrezGene:8086230UniProt:C5X096EnsemblPlants:EER93437ProteinID:EER93437
ProteinID:EER93437.1GO:GO:0000003GO:GO:0003674GO:GO:0003824GO:GO:0004197GO:GO:0005575
GO:GO:0005576GO:GO:0005615GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005764
GO:GO:0005773GO:GO:0006508GO:GO:0006950GO:GO:0007275GO:GO:0007568GO:GO:0008150
GO:GO:0008152GO:GO:0008219GO:GO:0008233GO:GO:0008234GO:GO:0009056GO:GO:0009605
GO:GO:0009607GO:GO:0009626GO:GO:0009628GO:GO:0009719GO:GO:0009733GO:GO:0009735
GO:GO:0009744GO:GO:0009749GO:GO:0009750GO:GO:0009791GO:GO:0009817GO:GO:0009908
GO:GO:0009987GO:GO:0010150GO:GO:0010224GO:GO:0010282GO:GO:0010623GO:GO:0016787
GO:GO:0019538GO:GO:0030154GO:GO:0051603GO:GO:0080187GO:GO:1990169PFAM:PF00112
PFAM:PF08246PRINTS:PR00705ScanProsite:PS00139ScanProsite:PS00639ScanProsite:PS00640PANTHER:PTHR12411
PANTHER:PTHR12411:SF418InterPro:Papain_like_cys_pep_sfInterPro:Pept_asp_ASInterPro:Pept_cys_ASInterPro:Pept_his_ASInterPro:Peptidase_C1A
InterPro:Peptidase_C1A_CInterPro:Prot_inhib_I29SMART:SM00645SMART:SM00848EnsemblPlantsGene:SORBI_3001G086800SUPFAM:SSF54001
unigene:Sbi.8726SignalP:SignalP-noTMUniParc:UPI0001A82D2ERefSeq:XP_002466439.1SEG:seg:
Description
hypothetical protein
Coordinates
chr1:-:6729584..6731483
Molecular Weight (calculated)
37619.7 Da
IEP (calculated)
5.155
GRAVY (calculated)
-0.263
Length
353 amino acids
Sequence
(BLAST)
001: MSVSRFVLTV LVVASVCTAA APRALAVREL AGEEESAAVA AAMVSRHEKW MAEHGRTYTD EAEKARRLEI FRANAEFIDS FNDAGKHSHR LATNRFADLT
101: DEEFRAARTG FRPRPAPAAA AGSGGRFRYE NFSLADAAQS VDWRAMGAVT GVKDQGECGC CWAFSAVAAV EGLNKIRTGR LVSLSEQELV DCDVNGEDQG
201: CEGGLMDDAF QFIERRGGLA SESGYPYQGD DGSCRSSAAA ARAASIRGHE DVPRNNEAAL AAAVANQPVS VAINGEDYAF RFYDSGVLGG ECGTDLNHAI
301: TAVGYGTAAD GSKYWLMKNS WGTSWGEGGY VRIRRGVRGE GVCGLAKLPS YPV
Best Arabidopsis Sequence Match ( AT2G27420.1 )
(BLAST)
001: MASTIIFILT IFLSYRTSLA TSRGSLFEAS AIEKHEQWMA RFNRVYSDET EKRNRFNIFK KNLEFVQNFN MNNKITYKVD INEFSDLTDE EFRATHTGLV
101: VPEAITRIST LSSGKNTVPF RYGNVSDNGE SMDWRQEGAV TPVKYQGRCG GCWAFSAVAA VEGITKITKG ELVSLSEQQL LDCDRDYNQG CRGGIMSKAF
201: EYIIKNQGIT TEDNYPYQES QQTCSSSTTL SSSFRAATIS GYETVPMNNE EALLQAVSQQ PVSVGIEGTG AAFRHYSGGV FNGECGTDLH HAVTIVGYGM
301: SEEGTKYWVV KNSWGETWGE NGYMRIKRDV DAPQGMCGLA ILAFYPLA
Arabidopsis Description
Cysteine proteinase [Source:UniProtKB/TrEMBL;Acc:Q9ZQH7]
SUBAcon: [plasma membrane,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.