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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 3
  • plasma membrane 3
  • golgi 3
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G391500.1 Wheat endoplasmic reticulum, extracellular 92.55 93.35
TraesCS5D01G401300.1 Wheat extracellular 91.98 93.04
Zm00001d013261_P001 Maize extracellular 76.5 78.3
EER93437 Sorghum endoplasmic reticulum 78.51 77.62
HORVU6Hr1G084520.5 Barley extracellular 52.44 53.98
HORVU2Hr1G009150.1 Barley extracellular, vacuole 52.72 53.96
HORVU2Hr1G009640.1 Barley extracellular 52.15 53.53
CDY58055 Canola golgi, nucleus, plastid 49.28 53.42
HORVU1Hr1G060040.1 Barley endoplasmic reticulum, extracellular 52.15 53.37
HORVU2Hr1G009610.1 Barley extracellular 51.86 53.24
Bra021998.1-P Field mustard endoplasmic reticulum 52.72 53.18
CDX87758 Canola endoplasmic reticulum 52.72 53.18
CDY50483 Canola endoplasmic reticulum 52.72 53.18
HORVU6Hr1G083420.1 Barley extracellular 51.86 53.08
HORVU4Hr1G006270.1 Barley extracellular, vacuole 51.86 52.92
HORVU7Hr1G044230.3 Barley extracellular 51.29 52.65
HORVU2Hr1G009510.1 Barley cytosol 51.29 52.19
AT5G45890.1 Thale cress endoplasmic reticulum, golgi 51.58 52.02
HORVU4Hr1G006310.1 Barley endoplasmic reticulum, extracellular 51.29 51.88
Bra025046.1-P Field mustard endoplasmic reticulum, extracellular 51.0 51.74
HORVU4Hr1G006280.2 Barley extracellular 50.14 51.02
CDX77621 Canola endoplasmic reticulum, extracellular 49.28 50.15
Solyc02g076910.2.1 Tomato extracellular, golgi 49.86 49.57
PGSC0003DMT400026448 Potato endoplasmic reticulum, extracellular, vacuole 49.28 49.57
HORVU2Hr1G023980.2 Barley vacuole 46.7 47.66
HORVU3Hr1G088270.2 Barley extracellular 48.42 45.8
HORVU3Hr1G088080.2 Barley endoplasmic reticulum, extracellular 48.42 45.19
HORVU3Hr1G091800.1 Barley endoplasmic reticulum 47.56 43.8
HORVU3Hr1G091790.1 Barley extracellular 46.7 43.7
HORVU3Hr1G091920.2 Barley endoplasmic reticulum 46.42 43.43
HORVU6Hr1G070320.2 Barley endoplasmic reticulum, extracellular 43.84 42.03
HORVU1Hr1G003940.6 Barley endoplasmic reticulum 38.4 36.31
HORVU7Hr1G055310.1 Barley extracellular 46.13 34.48
HORVU2Hr1G121150.1 Barley endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole 46.42 33.33
HORVU2Hr1G113460.2 Barley plasma membrane 44.99 32.11
HORVU2Hr1G121440.2 Barley endoplasmic reticulum 42.69 29.8
HORVU1Hr1G075530.3 Barley plastid 38.68 26.63
Protein Annotations
Gene3D:3.90.70.10MapMan:50.3.4UniProt:A0A287SDB5GO:GO:0000003GO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005773GO:GO:0006508
GO:GO:0006950GO:GO:0007275GO:GO:0007568GO:GO:0008150GO:GO:0008152GO:GO:0008219
GO:GO:0008233GO:GO:0008234GO:GO:0009605GO:GO:0009607GO:GO:0009626GO:GO:0009628
GO:GO:0009719GO:GO:0009733GO:GO:0009735GO:GO:0009744GO:GO:0009749GO:GO:0009750
GO:GO:0009791GO:GO:0009817GO:GO:0009908GO:GO:0009987GO:GO:0010150GO:GO:0010224
GO:GO:0010282GO:GO:0010623GO:GO:0016787GO:GO:0019538GO:GO:0030154GO:GO:0080187
GO:GO:1990169EnsemblPlantsGene:HORVU5Hr1G095580EnsemblPlants:HORVU5Hr1G095580.1PFAM:PF00112PFAM:PF08246PRINTS:PR00705
ScanProsite:PS00139ScanProsite:PS00639ScanProsite:PS00640PANTHER:PTHR12411PANTHER:PTHR12411:SF418InterPro:Papain_like_cys_pep_sf
InterPro:Pept_asp_ASInterPro:Pept_cys_ASInterPro:Pept_his_ASInterPro:Peptidase_C1AInterPro:Peptidase_C1A_CInterPro:Prot_inhib_I29
SMART:SM00645SMART:SM00848SUPFAM:SSF54001SignalP:SignalP-noTMUniParc:UPI000B48434ASEG:seg
Description
No Description!
Coordinates
chrchr5H:+:598915631..598917732
Molecular Weight (calculated)
36897.2 Da
IEP (calculated)
5.740
GRAVY (calculated)
-0.182
Length
349 amino acids
Sequence
(BLAST)
001: MSLSTLILAL LAMSSAVAAP RALAARQLAG DEAITVEAAM VSRHEKWMAE HGRTYANEEE KARRLEVFRA NAKLIDSFNS AEDSTHRLAT NRFADLTDEE
101: FRAARTGLRR PPAAAAGAGS GAGRFRYENF SLADAAGSMD WRAMGAVTGV KDQGSCGCCW AFSAVAAVEG LTKIRTGRLV SLSEQQLVDC DVYGDDEGCA
201: GGLMDNAFEY MINRGGLTTE SSYPYRGTDG SCRRSASAAS IRGYEDVPAN NEAALMAAVA HQPVSVAING GDSVFRFYDS GVLGGSGCGT ELNHAITAVG
301: YGTASDGTKY WIMKNSWGGS WGEGGYVRIR RGVRGEGVCG LAQLASYPV
Best Arabidopsis Sequence Match ( AT1G29090.1 )
(BLAST)
001: MCDSFINNKM TSILFMLVSL TILSMNLKVS QATSRVTFHE PIVAEHHQQW MTRFSRVYSD ELEKQMRFDV FKKNLKFIEK FNKKGDRTYK LGVNEFADWT
101: REEFIATHTG LKGVNGIPSS EFVDEMIPSW NWNVSDVAGR ETKDWRYEGA VTPVKYQGQC GCCWAFSSVA AVEGLTKIVG NNLVSLSEQQ LLDCDRERDN
201: GCNGGIMSDA FSYIIKNRGI ASEASYPYQA AEGTCRYNGK PSAWIRGFQT VPSNNERALL EAVSKQPVSV SIDADGPGFM HYSGGVYDEP YCGTNVNHAV
301: TFVGYGTSPE GIKYWLAKNS WGETWGENGY IRIRRDVAWP QGMCGVAQYA FYPVA
Arabidopsis Description
Cysteine proteinases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q84W75]
SUBAcon: [endoplasmic reticulum,plastid,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.