Factsheet for HORVU1Hr1G003940.6

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 3
golgi 3
plasma membrane 3
endoplasmic reticulum 5
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G027730.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G20850.1	HORVU3Hr1G027730.1	AT3G01340.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G033200.1	Wheat	endoplasmic reticulum, extracellular, golgi	77.51	81.25
TraesCS1D01G026500.1	Wheat	endoplasmic reticulum	76.69	80.63
TraesCS1A01G027300.1	Wheat	endoplasmic reticulum	76.42	80.34
Os05t0108600-01	Rice	extracellular	62.6	64.53
GSMUA_Achr2P04950_001	Banana	endoplasmic reticulum, golgi	58.27	61.6
KXG21060	Sorghum	endoplasmic reticulum, golgi, vacuole	61.79	61.46
Zm00001d035689_P001	Maize	extracellular	59.35	58.09
VIT_18s0122g00790.t01	Wine grape	nucleus	52.85	58.04
Solyc04g082710.2.1	Tomato	cytosol	47.15	57.05
VIT_03s0038g04000.t01	Wine grape	vacuole	54.2	56.82
KRH60879	Soybean	endoplasmic reticulum	53.66	56.73
Solyc12g094700.1.1	Tomato	extracellular	50.41	56.19
KRH51560	Soybean	endoplasmic reticulum	53.12	56.0
KRH60878	Soybean	endoplasmic reticulum	52.85	55.87
AT4G35350.1	Thale cress	endoplasmic reticulum	53.66	55.77
CDY01351	Canola	endoplasmic reticulum	52.85	55.56
KRH51561	Soybean	endoplasmic reticulum	52.57	55.43
Bra016447.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	53.39	55.03
PGSC0003DMT400075600	Potato	vacuole	52.03	55.01
CDY31861	Canola	endoplasmic reticulum	52.57	54.96
Bra012252.1-P	Field mustard	endoplasmic reticulum	52.3	54.83
Bra011608.1-P	Field mustard	endoplasmic reticulum	52.85	54.78
CDX75496	Canola	endoplasmic reticulum	52.85	54.78
GSMUA_Achr3P03740_001	Banana	endoplasmic reticulum	52.03	54.39
AT1G20850.1	Thale cress	endoplasmic reticulum	52.03	53.93
PGSC0003DMT400025691	Potato	endoplasmic reticulum, extracellular	52.03	53.93
CDY31498	Canola	cytosol	43.36	53.51
CDX96617	Canola	endoplasmic reticulum	46.07	51.99
CDY33651	Canola	endoplasmic reticulum	45.8	51.84
CDX69132	Canola	plastid	52.85	51.32
GSMUA_Achr3P11680_001	Banana	endoplasmic reticulum, vacuole	53.93	50.9
HORVU6Hr1G070320.2	Barley	endoplasmic reticulum, extracellular	46.34	46.98
HORVU4Hr1G006270.1	Barley	extracellular, vacuole	38.21	41.23
HORVU3Hr1G088270.2	Barley	extracellular	40.92	40.92
HORVU4Hr1G006310.1	Barley	endoplasmic reticulum, extracellular	37.67	40.29
HORVU2Hr1G009150.1	Barley	extracellular, vacuole	37.13	40.18
HORVU3Hr1G088080.2	Barley	endoplasmic reticulum, extracellular	40.65	40.11
HORVU2Hr1G009640.1	Barley	extracellular	36.59	39.71
HORVU1Hr1G060040.1	Barley	endoplasmic reticulum, extracellular	36.59	39.59
HORVU3Hr1G091790.1	Barley	extracellular	39.84	39.41
HORVU4Hr1G006280.2	Barley	extracellular	36.59	39.36
HORVU3Hr1G091920.2	Barley	endoplasmic reticulum	39.57	39.14
HORVU2Hr1G009610.1	Barley	extracellular	36.04	39.12
HORVU3Hr1G091800.1	Barley	endoplasmic reticulum	39.84	38.79
HORVU5Hr1G095580.1	Barley	endoplasmic reticulum, extracellular	36.31	38.4
HORVU6Hr1G084520.5	Barley	extracellular	35.23	38.35
HORVU7Hr1G044230.3	Barley	extracellular	35.23	38.24
HORVU2Hr1G009510.1	Barley	cytosol	35.23	37.9
HORVU6Hr1G083420.1	Barley	extracellular	34.69	37.54
HORVU2Hr1G023980.2	Barley	vacuole	31.71	34.21
HORVU7Hr1G055310.1	Barley	extracellular	40.92	32.33
HORVU2Hr1G113460.2	Barley	plasma membrane	41.46	31.29
HORVU2Hr1G121150.1	Barley	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	40.65	30.86
HORVU2Hr1G121440.2	Barley	endoplasmic reticulum	37.13	27.4
HORVU1Hr1G075530.3	Barley	plastid	30.62	22.29

Protein Annotations

Gene3D:3.90.70.10	MapMan:50.3.4	UniProt:A0A287EHW3	GO:GO:0003674	GO:GO:0003824	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0008234	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:HORVU1Hr1G003940
EnsemblPlants:HORVU1Hr1G003940.6	PFAM:PF00112	PFAM:PF08246	ScanProsite:PS00139	PANTHER:PTHR12411	PANTHER:PTHR12411:SF427
InterPro:Papain_like_cys_pep_sf	InterPro:Pept_cys_AS	InterPro:Peptidase_C1A	InterPro:Peptidase_C1A_C	InterPro:Prot_inhib_I29	SMART:SM00645
SMART:SM00848	SUPFAM:SSF54001	SignalP:SignalP-noTM	UniParc:UPI000B470F11	SEG:seg	:

Description

No Description!

Coordinates

chrchr1H:+:8468125..8469506

Molecular Weight (calculated)

40827.9 Da

IEP (calculated)

6.346

GRAVY (calculated)

-0.498

Length

369 amino acids

Sequence
(BLAST)

001: MASKLSVAVL LLCVGACVAR NSDFSIVGYS EEDLSSHDRL VELFEKWLAK HQKAYASFEE KLHRFEVFKD NLKLIDEINR EVTSYWLGLN EFADLTHDEF
101: KTTYLGLSPP PARRSSSRSF RYENVAAHDL PKAVDWRKKG AVTDVKNQGQ CGSCWAFSTV AAVEGINAIV TGNLTALSEQ ELIDCSVDGN SGCNGGMMDY
201: AFSYIASSGG LHTEEAYPYL MEEGSCGDGK KSESEAVSIS GYEDVPTKDE QALIKALAHQ PVSVAIEASG RHFQFYSGGG FRRSVRRAAG SRRGGGRVRV
301: GQGQGARLHH REEFVGRQMG REGVHQDEEG HRQERGPLRH QQDGLLPYQG QLMMFQAEML HPGDTFNHP

Best Arabidopsis Sequence Match ( AT4G35350.2 )
(BLAST)

001: MAFSAPSLSK FSLLVAISAS ALLCCAFARD FSIVGYTPEH LTNTDKLLEL FESWMSEHSK AYKSVEEKVH RFEVFRENLM HIDQRNNEIN SYWLGLNEFA
101: DLTHEEFKGR YLGLAKPQFS RKRQPSANFR YRDITDLPKS VDWRKKGAVA PVKDQGQCGS CWAFSTVAAV EGINQITTGN LSSLSEQELI DCDTTFNSGC
201: NGGLMDYAFQ YIISTGGLHK EDDYPYLMEE GICQEQKEDV ERVTISGYED VPENDDESLV KALAHQPVSV AIEASGRDFQ FYKGVYNR

Arabidopsis Description

XCP1Cysteine protease XCP1 [Source:UniProtKB/Swiss-Prot;Acc:O65493]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.