Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 7
- vacuole 5
- plasma membrane 5
- golgi 5
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G20850.1 | CDY37530 | AT3G01340.1 | 21798944 |
| AT1G20850.1 | CDY49046 | AT3G01340.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31861 | Canola | endoplasmic reticulum | 98.29 | 97.73 |
| Bra012252.1-P | Field mustard | endoplasmic reticulum | 98.01 | 97.73 |
| CDX96617 | Canola | endoplasmic reticulum | 86.32 | 92.66 |
| AT1G20850.1 | Thale cress | endoplasmic reticulum | 93.16 | 91.85 |
| CDY33651 | Canola | endoplasmic reticulum | 85.19 | 91.72 |
| KRH60879 | Soybean | endoplasmic reticulum | 74.64 | 75.07 |
| Solyc04g082710.2.1 | Tomato | cytosol | 64.67 | 74.43 |
| VIT_18s0122g00790.t01 | Wine grape | nucleus | 71.23 | 74.4 |
| KRH51561 | Soybean | endoplasmic reticulum | 74.07 | 74.29 |
| KRH51560 | Soybean | endoplasmic reticulum | 73.79 | 74.0 |
| KRH60878 | Soybean | endoplasmic reticulum | 73.5 | 73.93 |
| CDY31498 | Canola | cytosol | 62.11 | 72.91 |
| Solyc12g094700.1.1 | Tomato | extracellular | 68.09 | 72.21 |
| PGSC0003DMT400025691 | Potato | endoplasmic reticulum, extracellular | 70.66 | 69.66 |
| PGSC0003DMT400075600 | Potato | vacuole | 68.95 | 69.34 |
| CDX75496 | Canola | endoplasmic reticulum | 69.8 | 68.82 |
| TraesCS1B01G033200.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 68.38 | 68.18 |
| TraesCS1A01G027300.1 | Wheat | endoplasmic reticulum | 68.09 | 68.09 |
| TraesCS1D01G026500.1 | Wheat | endoplasmic reticulum | 68.09 | 68.09 |
| GSMUA_Achr3P03740_001 | Banana | endoplasmic reticulum | 67.52 | 67.14 |
| Os05t0108600-01 | Rice | extracellular | 67.81 | 66.48 |
| TraesCS5D01G152400.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 66.95 | 66.01 |
| TraesCS5B01G138300.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 66.67 | 65.73 |
| Os01t0971400-01 | Rice | extracellular | 67.52 | 64.93 |
| CDX69132 | Canola | plastid | 69.8 | 64.47 |
| KXG21060 | Sorghum | endoplasmic reticulum, golgi, vacuole | 66.67 | 63.07 |
| EES02142 | Sorghum | vacuole | 67.81 | 62.96 |
| Zm00001d011787_P001 | Maize | extracellular | 68.38 | 62.34 |
| TraesCS5A01G138700.1 | Wheat | plastid | 66.95 | 62.33 |
| Zm00001d035689_P001 | Maize | extracellular | 65.53 | 61.01 |
| Os02t0715000-01 | Rice | endoplasmic reticulum | 58.12 | 55.74 |
| EES07368 | Sorghum | extracellular | 56.13 | 55.34 |
| CDY39574 | Canola | cytosol, endoplasmic reticulum, nucleus | 46.15 | 55.1 |
| TraesCS6A01G279500.1 | Wheat | endoplasmic reticulum, extracellular | 56.13 | 54.72 |
| Zm00001d017834_P001 | Maize | extracellular | 48.43 | 54.66 |
| TraesCS6B01G308300.1 | Wheat | extracellular, vacuole | 55.84 | 54.6 |
| HORVU6Hr1G070320.2 | Barley | endoplasmic reticulum, extracellular | 55.84 | 53.85 |
| HORVU1Hr1G003940.6 | Barley | endoplasmic reticulum | 55.56 | 52.85 |
| TraesCS6D01G259900.1 | Wheat | plastid | 55.84 | 51.85 |
| CDY34045 | Canola | endoplasmic reticulum | 51.85 | 50.42 |
| CDX83168 | Canola | endoplasmic reticulum | 51.57 | 50.14 |
| CDY48168 | Canola | endoplasmic reticulum | 50.43 | 49.3 |
| CDY17193 | Canola | endoplasmic reticulum | 43.59 | 48.11 |
| CDY58055 | Canola | golgi, nucleus, plastid | 43.87 | 47.83 |
| CDY39575 | Canola | endoplasmic reticulum | 49.0 | 46.74 |
| CDX75633 | Canola | vacuole | 49.0 | 45.99 |
| CDX77621 | Canola | endoplasmic reticulum, extracellular | 44.73 | 45.77 |
| CDY22445 | Canola | vacuole | 48.43 | 45.45 |
| CDY25283 | Canola | vacuole | 47.86 | 45.04 |
| CDY25281 | Canola | extracellular | 47.58 | 45.01 |
| CDX69285 | Canola | endoplasmic reticulum, vacuole | 47.86 | 44.92 |
| CDY50483 | Canola | endoplasmic reticulum | 44.16 | 44.8 |
| CDY37617 | Canola | endoplasmic reticulum, extracellular | 47.01 | 44.59 |
| CDX87758 | Canola | endoplasmic reticulum | 43.87 | 44.51 |
| CDY44047 | Canola | vacuole | 48.15 | 44.01 |
| CDY16132 | Canola | endoplasmic reticulum, extracellular, vacuole | 47.29 | 43.8 |
| CDY63262 | Canola | extracellular, plasma membrane, vacuole | 29.91 | 42.34 |
| CDY17093 | Canola | endoplasmic reticulum | 53.28 | 40.92 |
| CDY06760 | Canola | endoplasmic reticulum | 52.71 | 40.48 |
| CDX71540 | Canola | extracellular | 52.99 | 40.43 |
| CDY22370 | Canola | extracellular | 52.99 | 40.43 |
| CDY25228 | Canola | extracellular | 52.42 | 40.0 |
| CDY17044 | Canola | endoplasmic reticulum | 51.85 | 39.65 |
| CDY46179 | Canola | endoplasmic reticulum | 50.71 | 39.56 |
| CDX95457 | Canola | endoplasmic reticulum, extracellular, vacuole | 50.43 | 39.42 |
| CDY50157 | Canola | endoplasmic reticulum, extracellular, vacuole | 50.43 | 39.42 |
| CDY63586 | Canola | endoplasmic reticulum | 51.28 | 39.22 |
| CDY50154 | Canola | endoplasmic reticulum | 48.72 | 38.86 |
| CDX95451 | Canola | endoplasmic reticulum, extracellular, vacuole | 47.86 | 38.18 |
| CDX94938 | Canola | extracellular, vacuole | 47.86 | 38.01 |
| CDX93470 | Canola | plasma membrane | 47.86 | 37.92 |
| CDX99227 | Canola | endoplasmic reticulum | 50.71 | 35.11 |
| CDY02431 | Canola | nucleus | 41.03 | 32.07 |
| CDY27951 | Canola | endoplasmic reticulum | 41.03 | 31.37 |
Protein Annotations
| MapMan:19.4.1.1 | MapMan:27.2.10 | Gene3D:3.90.70.10 | GO:A0A078EJP3 | MEROPS:C01.120 | EnsemblPlants:CDY01351 |
| ProteinID:CDY01351 | ProteinID:CDY01351.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006508 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00112325001 | PFAM:PF00112 |
| PFAM:PF08246 | PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00639 | ScanProsite:PS00640 | PANTHER:PTHR12411 |
| PANTHER:PTHR12411:SF357 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS | InterPro:Pept_his_AS | InterPro:Peptidase_C1A |
| InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | SMART:SM00645 | SMART:SM00848 | SUPFAM:SSF54001 | SignalP:SignalP-noTM |
| UniParc:UPI0004EDB6BA | SEG:seg | : | : | : | : |
Description
BnaA07g11240D
Coordinates
chrLK031926:-:471157..472674
Molecular Weight (calculated)
39429.2 Da
IEP (calculated)
5.001
GRAVY (calculated)
-0.529
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MATRIVCFLL ALTALSLSFA ASHDFSIVGY APEDLESHDK LIELFENWLS NFEKAYETVE EKFRRFEVFK DNLKHIDETN KKAKSYWLGL NEFADLSHEE
101: FKNKYLGLKT DIVRRDDDER SYQEFAYKDV ESLPKSVDWR KKGAVSYVKN QGSCGSCWAF STVAAVEGIN KIVTGNLTTL SEQELIDCDT TYNNGCNGGL
201: MDYAFDYIVK NGGLRKEEDY PYSMEEGTCE TQKDESEMVT INGHQDVPTN DEKSLLKALA HQPLSVAIDA SGREFQFYSG GVFDGRCGVD LDHGVAAVGY
301: GSSKGSDYII VKNSWGPKWG EKGYIRMKRN TGKPEGLCGI NKMASFPTKT K
101: FKNKYLGLKT DIVRRDDDER SYQEFAYKDV ESLPKSVDWR KKGAVSYVKN QGSCGSCWAF STVAAVEGIN KIVTGNLTTL SEQELIDCDT TYNNGCNGGL
201: MDYAFDYIVK NGGLRKEEDY PYSMEEGTCE TQKDESEMVT INGHQDVPTN DEKSLLKALA HQPLSVAIDA SGREFQFYSG GVFDGRCGVD LDHGVAAVGY
301: GSSKGSDYII VKNSWGPKWG EKGYIRMKRN TGKPEGLCGI NKMASFPTKT K
001: MALSSPSRIL CFALALSAAS LSLSFASSHD YSIVGYSPED LESHDKLIEL FENWISNFEK AYETVEEKFL RFEVFKDNLK HIDETNKKGK SYWLGLNEFA
101: DLSHEEFKKM YLGLKTDIVR RDEERSYAEF AYRDVEAVPK SVDWRKKGAV AEVKNQGSCG SCWAFSTVAA VEGINKIVTG NLTTLSEQEL IDCDTTYNNG
201: CNGGLMDYAF EYIVKNGGLR KEEDYPYSME EGTCEMQKDE SETVTINGHQ DVPTNDEKSL LKALAHQPLS VAIDASGREF QFYSGGVFDG RCGVDLDHGV
301: AAVGYGSSKG SDYIIVKNSW GPKWGEKGYI RLKRNTGKPE GLCGINKMAS FPTKTK
101: DLSHEEFKKM YLGLKTDIVR RDEERSYAEF AYRDVEAVPK SVDWRKKGAV AEVKNQGSCG SCWAFSTVAA VEGINKIVTG NLTTLSEQEL IDCDTTYNNG
201: CNGGLMDYAF EYIVKNGGLR KEEDYPYSME EGTCEMQKDE SETVTINGHQ DVPTNDEKSL LKALAHQPLS VAIDASGREF QFYSGGVFDG RCGVDLDHGV
301: AAVGYGSSKG SDYIIVKNSW GPKWGEKGYI RLKRNTGKPE GLCGINKMAS FPTKTK
Arabidopsis Description
XCP2Cysteine protease XCP2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM66]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.