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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, vacuole

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 4
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, vacuole
Any Predictor:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:golgi
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G044200.1
TraesCS1B01G057100.1
TraesCS1D01G044700.1
TraesCS3B01G162400.1
TraesCS3D01G145000.1
TraesCS5A01G485600.1
TraesCS5B01G499200.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G20850.1 TraesCS1A01G044200.1 AT3G01340.1 21798944
AT1G20850.1 TraesCS1B01G057100.1 AT3G01340.1 21798944
AT1G20850.1 TraesCS1D01G044700.1 AT3G01340.1 21798944
AT1G20850.1 TraesCS3B01G162400.1 AT3G01340.1 21798944
AT1G20850.1 TraesCS3D01G145000.1 AT3G01340.1 21798944
AT1G20850.1 TraesCS5A01G485600.1 AT3G01340.1 21798944
AT1G20850.1 TraesCS5B01G499200.1 AT3G01340.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G152400.1 Wheat endoplasmic reticulum, golgi, vacuole 99.16 99.16
TraesCS5A01G138700.1 Wheat plastid 98.6 93.1
TraesCS1B01G033200.1 Wheat endoplasmic reticulum, extracellular, golgi 90.73 91.76
Os05t0108600-01 Rice extracellular 76.69 76.26
KXG21060 Sorghum endoplasmic reticulum, golgi, vacuole 74.16 71.16
GSMUA_Achr2P04950_001 Banana endoplasmic reticulum, golgi 69.66 71.06
Zm00001d035689_P001 Maize extracellular 73.31 69.23
Solyc04g082710.2.1 Tomato cytosol 58.99 68.85
VIT_18s0122g00790.t01 Wine grape nucleus 64.61 68.45
Solyc12g094700.1.1 Tomato extracellular 63.48 68.28
VIT_03s0038g04000.t01 Wine grape vacuole 67.42 68.18
AT4G35350.1 Thale cress endoplasmic reticulum 67.42 67.61
Bra016447.1-P Field mustard endoplasmic reticulum, golgi, vacuole 67.7 67.32
KRH60879 Soybean endoplasmic reticulum 65.73 67.05
CDY01351 Canola endoplasmic reticulum 65.73 66.67
CDY31861 Canola endoplasmic reticulum 66.01 66.57
KRH60878 Soybean endoplasmic reticulum 65.17 66.48
Bra011608.1-P Field mustard endoplasmic reticulum 66.29 66.29
CDX75496 Canola endoplasmic reticulum 66.29 66.29
GSMUA_Achr3P03740_001 Banana endoplasmic reticulum 65.73 66.29
KRH51560 Soybean endoplasmic reticulum 65.17 66.29
Bra012252.1-P Field mustard endoplasmic reticulum 65.45 66.19
PGSC0003DMT400075600 Potato vacuole 64.89 66.19
CDX96617 Canola endoplasmic reticulum 60.39 65.75
CDY33651 Canola endoplasmic reticulum 60.11 65.64
AT1G20850.1 Thale cress endoplasmic reticulum 65.45 65.45
KRH51561 Soybean endoplasmic reticulum 64.33 65.43
PGSC0003DMT400025691 Potato endoplasmic reticulum, extracellular 64.61 64.61
CDX69132 Canola plastid 66.29 62.11
GSMUA_Achr3P11680_001 Banana endoplasmic reticulum, vacuole 64.33 58.57
TraesCS6B01G308300.1 Wheat extracellular, vacuole 56.46 55.99
CDY31498 Canola cytosol 46.63 55.52
TraesCS3B01G380400.1 Wheat golgi 51.69 50.55
TraesCS3B01G378600.1 Wheat endoplasmic reticulum 51.69 49.86
TraesCS6B01G182200.1 Wheat extracellular 46.63 48.54
TraesCS6B01G182100.1 Wheat endoplasmic reticulum, extracellular 46.35 48.25
TraesCS6B01G379900.1 Wheat cytosol, mitochondrion, nucleus 19.94 47.97
TraesCS6B01G378700.1 Wheat cytosol, mitochondrion, nucleus 19.66 47.3
TraesCS4B01G039500.1 Wheat extracellular 45.22 47.21
TraesCS4B01G039600.1 Wheat extracellular 45.22 47.21
TraesCS4B01G039800.1 Wheat extracellular 45.22 47.21
TraesCS5B01G072400.1 Wheat extracellular 44.66 47.18
TraesCS2B01G067700.1 Wheat extracellular 44.94 47.06
TraesCS2B01G067900.1 Wheat extracellular 44.94 47.06
TraesCS2B01G067800.1 Wheat extracellular 44.94 47.06
TraesCS4B01G039700.1 Wheat extracellular 44.94 46.92
TraesCS4B01G039900.1 Wheat endoplasmic reticulum, extracellular 44.94 46.92
TraesCS1B01G236800.1 Wheat extracellular 44.38 46.61
TraesCS3B01G447400.1 Wheat endoplasmic reticulum 48.88 46.52
TraesCS3B01G447500.1 Wheat extracellular, vacuole 48.03 46.09
TraesCS4B01G040000.1 Wheat endoplasmic reticulum, extracellular 44.1 46.04
TraesCS7B01G387600.1 Wheat extracellular 43.54 45.59
TraesCS6B01G380200.1 Wheat extracellular 43.26 45.43
TraesCS5B01G523100.1 Wheat extracellular 43.26 45.29
TraesCS4B01G076200.1 Wheat endoplasmic reticulum 50.84 45.25
TraesCS6B01G378400.1 Wheat extracellular 42.98 45.13
TraesCS6B01G378900.1 Wheat extracellular 42.98 45.13
TraesCS6B01G379200.1 Wheat extracellular 42.98 45.13
TraesCS6B01G380000.1 Wheat extracellular 42.98 45.13
TraesCS6B01G379000.1 Wheat extracellular 42.7 44.84
TraesCS6B01G379300.1 Wheat extracellular 42.7 44.84
TraesCS7B01G292000.1 Wheat cytosol, extracellular, nucleus 38.2 44.3
TraesCS2B01G068000.1 Wheat extracellular, golgi, plastid 35.96 44.14
TraesCS2B01G540100.2 Wheat golgi 50.84 39.09
TraesCS2B01G577500.1 Wheat endoplasmic reticulum 50.84 38.68
TraesCS2B01G577300.1 Wheat extracellular, golgi 50.84 38.59
TraesCS7B01G162200.1 Wheat endoplasmic reticulum 49.16 37.96
TraesCS2B01G576300.1 Wheat unclear 49.44 37.53
TraesCS1B01G338500.1 Wheat endoplasmic reticulum, unclear 44.1 33.98
Protein Annotations
MapMan:19.4.1.1MapMan:27.2.10Gene3D:3.90.70.10GO:GO:0003674GO:GO:0003824GO:GO:0006508
GO:GO:0008150GO:GO:0008152GO:GO:0008234GO:GO:0016787GO:GO:0019538PFAM:PF00112
PFAM:PF08246PRINTS:PR00705ScanProsite:PS00139ScanProsite:PS00639ScanProsite:PS00640PANTHER:PTHR12411
PANTHER:PTHR12411:SF427InterPro:Papain_like_cys_pep_sfInterPro:Pept_asp_ASInterPro:Pept_cys_ASInterPro:Pept_his_ASInterPro:Peptidase_C1A
InterPro:Peptidase_C1A_CInterPro:Prot_inhib_I29SMART:SM00645SMART:SM00848SUPFAM:SSF54001SignalP:SignalP-noTM
EnsemblPlantsGene:TraesCS5B01G138300EnsemblPlants:TraesCS5B01G138300.1TIGR:cd02248SEG:seg::
Description
No Description!
Coordinates
chr5B:-:262351437..262352737
Molecular Weight (calculated)
38538.1 Da
IEP (calculated)
5.439
GRAVY (calculated)
-0.311
Length
356 amino acids
Sequence
(BLAST)
001: MASPRHLLKL SGALLLLCVG VCVARNSDFS IVGYSEEDLS SNDRLVELFE KWLAKHQKAY ASFEEKLHKF EVFKDNLKHI DKINREVTSY WLGLNEFADL
101: TNDEFKAAYL GLNAAPARRG SSRSFRYEDV SASDLPKSVD WRKKGAVTEV KNQGQCGSCW AFSTVAAVEG INAIVTGNLT ALSEQELIDC SVDGNSGCNG
201: GLMDYAFSYI ASSGGLHTEE AYPYLMEEGS CGDGKKAESE AVTISGFEDV PANDGQALIK ALAHQPVSVA IEASGRHFQF YSGGVFDGPC GAQLDHGVAA
301: VGYGSDKGKG HDYIIVRNSW GADWGEKGYI RMKRGTSNGE GLCGINKMAS YPTKDK
Best Arabidopsis Sequence Match ( AT4G35350.1 )
(BLAST)
001: MAFSAPSLSK FSLLVAISAS ALLCCAFARD FSIVGYTPEH LTNTDKLLEL FESWMSEHSK AYKSVEEKVH RFEVFRENLM HIDQRNNEIN SYWLGLNEFA
101: DLTHEEFKGR YLGLAKPQFS RKRQPSANFR YRDITDLPKS VDWRKKGAVA PVKDQGQCGS CWAFSTVAAV EGINQITTGN LSSLSEQELI DCDTTFNSGC
201: NGGLMDYAFQ YIISTGGLHK EDDYPYLMEE GICQEQKEDV ERVTISGYED VPENDDESLV KALAHQPVSV AIEASGRDFQ FYKGGVFNGK CGTDLDHGVA
301: AVGYGSSKGS DYVIVKNSWG PRWGEKGFIR MKRNTGKPEG LCGINKMASY PTKTK
Arabidopsis Description
XCP1Cysteine protease XCP1 [Source:UniProtKB/Swiss-Prot;Acc:O65493]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.