Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 7
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G346900.1 | Wheat | endoplasmic reticulum | 96.21 | 97.53 |
| TraesCS3B01G380400.1 | Wheat | golgi | 95.66 | 96.98 |
| TraesCS3D01G340500.1 | Wheat | endoplasmic reticulum | 94.85 | 96.15 |
| HORVU3Hr1G088270.2 | Barley | extracellular | 95.39 | 95.39 |
| HORVU3Hr1G088080.2 | Barley | endoplasmic reticulum, extracellular | 92.41 | 91.18 |
| EES15197 | Sorghum | endoplasmic reticulum | 80.76 | 80.11 |
| Zm00001d031971_P002 | Maize | endoplasmic reticulum | 73.71 | 78.61 |
| Os08t0556900-01 | Rice | extracellular | 78.05 | 74.81 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 60.98 | 62.67 |
| VIT_01s0137g00330.t01 | Wine grape | endoplasmic reticulum | 59.62 | 61.28 |
| AT5G50260.1 | Thale cress | endoplasmic reticulum | 59.35 | 60.66 |
| Solyc03g111730.2.1 | Tomato | endoplasmic reticulum | 58.81 | 60.28 |
| PGSC0003DMT400039210 | Potato | endoplasmic reticulum | 58.81 | 60.28 |
| CDY34045 | Canola | endoplasmic reticulum | 58.54 | 59.83 |
| Bra000615.1-P | Field mustard | endoplasmic reticulum | 58.54 | 59.83 |
| VIT_17s0000g09770.t01 | Wine grape | endoplasmic reticulum | 58.27 | 59.72 |
| KRH63669 | Soybean | endoplasmic reticulum | 58.54 | 59.67 |
| CDX83168 | Canola | endoplasmic reticulum | 58.27 | 59.56 |
| CDY39574 | Canola | cytosol, endoplasmic reticulum, nucleus | 47.15 | 59.18 |
| KRH54277 | Soybean | endoplasmic reticulum | 57.99 | 59.12 |
| PGSC0003DMT400027975 | Potato | endoplasmic reticulum | 56.64 | 58.54 |
| Solyc05g013920.2.1 | Tomato | endoplasmic reticulum | 56.37 | 58.1 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 55.28 | 57.3 |
| KRH03891 | Soybean | endoplasmic reticulum | 57.72 | 56.2 |
| TraesCS6B01G379900.1 | Wheat | cytosol, mitochondrion, nucleus | 22.49 | 56.08 |
| CDY48168 | Canola | endoplasmic reticulum | 54.47 | 55.99 |
| Bra018067.1-P | Field mustard | endoplasmic reticulum | 54.47 | 55.99 |
| TraesCS6B01G378700.1 | Wheat | cytosol, mitochondrion, nucleus | 22.22 | 55.41 |
| TraesCS4B01G076200.1 | Wheat | endoplasmic reticulum | 59.89 | 55.25 |
| TraesCS3B01G447400.1 | Wheat | endoplasmic reticulum | 55.83 | 55.08 |
| AT3G48340.1 | Thale cress | endoplasmic reticulum, extracellular | 53.66 | 54.85 |
| TraesCS3B01G447500.1 | Wheat | extracellular, vacuole | 54.2 | 53.91 |
| AT3G48350.1 | Thale cress | endoplasmic reticulum | 52.57 | 53.3 |
| TraesCS1B01G033200.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 50.68 | 53.12 |
| Bra018066.1-P | Field mustard | endoplasmic reticulum | 52.85 | 52.99 |
| CDY39575 | Canola | endoplasmic reticulum | 52.85 | 52.99 |
| TraesCS5B01G138300.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 49.86 | 51.69 |
| TraesCS6B01G182100.1 | Wheat | endoplasmic reticulum, extracellular | 45.53 | 49.12 |
| TraesCS6B01G182200.1 | Wheat | extracellular | 44.72 | 48.25 |
| TraesCS5B01G072400.1 | Wheat | extracellular | 43.9 | 48.07 |
| TraesCS4B01G039500.1 | Wheat | extracellular | 44.17 | 47.8 |
| TraesCS4B01G039600.1 | Wheat | extracellular | 43.9 | 47.51 |
| TraesCS4B01G039700.1 | Wheat | extracellular | 43.9 | 47.51 |
| TraesCS4B01G039800.1 | Wheat | extracellular | 43.9 | 47.51 |
| TraesCS2B01G067800.1 | Wheat | extracellular | 43.63 | 47.35 |
| TraesCS2B01G067900.1 | Wheat | extracellular | 43.63 | 47.35 |
| TraesCS2B01G067700.1 | Wheat | extracellular | 43.63 | 47.35 |
| TraesCS4B01G039900.1 | Wheat | endoplasmic reticulum, extracellular | 43.63 | 47.21 |
| TraesCS1B01G236800.1 | Wheat | extracellular | 43.36 | 47.2 |
| TraesCS6B01G380000.1 | Wheat | extracellular | 43.09 | 46.9 |
| TraesCS6B01G378900.1 | Wheat | extracellular | 43.09 | 46.9 |
| TraesCS6B01G380200.1 | Wheat | extracellular | 42.82 | 46.61 |
| TraesCS6B01G379000.1 | Wheat | extracellular | 42.82 | 46.61 |
| TraesCS2B01G068000.1 | Wheat | extracellular, golgi, plastid | 36.59 | 46.55 |
| TraesCS6B01G378400.1 | Wheat | extracellular | 42.55 | 46.31 |
| TraesCS4B01G040000.1 | Wheat | endoplasmic reticulum, extracellular | 42.55 | 46.04 |
| TraesCS6B01G379200.1 | Wheat | extracellular | 42.01 | 45.72 |
| TraesCS6B01G379300.1 | Wheat | extracellular | 42.01 | 45.72 |
| TraesCS7B01G387600.1 | Wheat | extracellular | 42.01 | 45.59 |
| TraesCS5B01G523100.1 | Wheat | extracellular | 41.46 | 45.0 |
| TraesCS7B01G292000.1 | Wheat | cytosol, extracellular, nucleus | 37.4 | 44.95 |
| TraesCS6B01G308300.1 | Wheat | extracellular, vacuole | 42.55 | 43.73 |
| TraesCS2B01G540100.2 | Wheat | golgi | 47.43 | 37.8 |
| TraesCS2B01G577500.1 | Wheat | endoplasmic reticulum | 47.15 | 37.18 |
| TraesCS2B01G577300.1 | Wheat | extracellular, golgi | 46.88 | 36.89 |
| TraesCS7B01G162200.1 | Wheat | endoplasmic reticulum | 45.53 | 36.44 |
| TraesCS2B01G576300.1 | Wheat | unclear | 45.8 | 36.03 |
| TraesCS1B01G338500.1 | Wheat | endoplasmic reticulum, unclear | 42.82 | 34.2 |
Protein Annotations
| Gene3D:3.90.70.10 | MapMan:50.3.4 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006508 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 | PFAM:PF00112 | PFAM:PF08246 |
| PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00639 | ScanProsite:PS00640 | PANTHER:PTHR12411 | PANTHER:PTHR12411:SF366 |
| InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS | InterPro:Pept_his_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C |
| InterPro:Prot_inhib_I29 | SMART:SM00645 | SMART:SM00848 | SUPFAM:SSF54001 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| EnsemblPlantsGene:TraesCS3B01G378600 | EnsemblPlants:TraesCS3B01G378600.1 | TIGR:cd02248 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr3B:+:596852556..596853845
Molecular Weight (calculated)
40114.3 Da
IEP (calculated)
8.071
GRAVY (calculated)
-0.339
Length
369 amino acids
Sequence
(BLAST)
(BLAST)
001: MARAIVLAAT MAAAVLFMLL AAAPAPASAM DFGDHDLASE DSLWALYERW RERHTVARDL GEKARRFNVF RENVRLIHEF NRGDAPYKLR LNRFGDMTAD
101: EFRRAYASSR VSHHRMFSRK EGGGGFMHGS ARDVPPSVDW RQKGAVTAVK DQGQCGSCWA FSTIAAVEGV NAIRTKNLTS LSEQQLVDCD TKSNAGCNGG
201: LMDYAFRYIA KHGGVAAEDA YPYKARQASS CNKKPSAVVT IDGYEDVPAN DEAALKKAVA AQPVAAQPVA VAIEASGSHF QFYSEGVFAG KCGTELDHGV
301: TAVGYGVTVD GTKYWIVKNS WGAEWGEKGY IRMKRDLKDK EGLCGIAMEA SYPVKTSANP KHAGAHDEL
101: EFRRAYASSR VSHHRMFSRK EGGGGFMHGS ARDVPPSVDW RQKGAVTAVK DQGQCGSCWA FSTIAAVEGV NAIRTKNLTS LSEQQLVDCD TKSNAGCNGG
201: LMDYAFRYIA KHGGVAAEDA YPYKARQASS CNKKPSAVVT IDGYEDVPAN DEAALKKAVA AQPVAAQPVA VAIEASGSHF QFYSEGVFAG KCGTELDHGV
301: TAVGYGVTVD GTKYWIVKNS WGAEWGEKGY IRMKRDLKDK EGLCGIAMEA SYPVKTSANP KHAGAHDEL
001: MATSIKSITL ALLIFSVLLI SLSLGSVTAT ETTRNEAEAR RMYERWLVEN RKNYNGLGEK ERRFEIFKDN LKFVEEHSSI PNRTYEVGLT RFADLTNDEF
101: RAIYLRSKME RTRVPVKGEK YLYKVGDSLP DAIDWRAKGA VNPVKDQGSC GSCWAFSAIG AVEGINQIKT GELISLSEQE LVDCDTSYND GCGGGLMDYA
201: FKFIIENGGI DTEEDYPYIA TDVNVCNSDK KNTRVVTIDG YEDVPQNDEK SLKKALANQP ISVAIEAGGR AFQLYTSGVF TGTCGTSLDH GVVAVGYGSE
301: GGQDYWIVRN SWGSNWGESG YFKLERNIKE SSGKCGVAMM ASYPTKSSGS NPPKPPAPSP VVCDKSNTCP AKSTCCCLYE YNGKCYSWGC CPYESATCCD
401: DGSSCCPQSY PVCDLKANTC RMKGNSPLSI KALTRGPAIA TTKSTNMLVG SA
101: RAIYLRSKME RTRVPVKGEK YLYKVGDSLP DAIDWRAKGA VNPVKDQGSC GSCWAFSAIG AVEGINQIKT GELISLSEQE LVDCDTSYND GCGGGLMDYA
201: FKFIIENGGI DTEEDYPYIA TDVNVCNSDK KNTRVVTIDG YEDVPQNDEK SLKKALANQP ISVAIEAGGR AFQLYTSGVF TGTCGTSLDH GVVAVGYGSE
301: GGQDYWIVRN SWGSNWGESG YFKLERNIKE SSGKCGVAMM ASYPTKSSGS NPPKPPAPSP VVCDKSNTCP AKSTCCCLYE YNGKCYSWGC CPYESATCCD
401: DGSSCCPQSY PVCDLKANTC RMKGNSPLSI KALTRGPAIA TTKSTNMLVG SA
Arabidopsis Description
RD21CProbable cysteine protease RD21C [Source:UniProtKB/Swiss-Prot;Acc:Q9LT78]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.