Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G407700.1 | Wheat | endoplasmic reticulum | 96.77 | 95.73 |
| TraesCS3A01G413000.1 | Wheat | endoplasmic reticulum | 95.15 | 95.66 |
| TraesCS3A01G413200.1 | Wheat | endoplasmic reticulum | 95.96 | 94.93 |
| HORVU3Hr1G091920.2 | Barley | endoplasmic reticulum | 92.18 | 91.69 |
| HORVU3Hr1G091790.1 | Barley | extracellular | 91.91 | 91.42 |
| TraesCS3B01G447400.1 | Wheat | endoplasmic reticulum | 90.3 | 89.57 |
| Os01t0907600-01 | Rice | extracellular | 72.24 | 72.24 |
| EES01927 | Sorghum | extracellular | 69.27 | 69.65 |
| Zm00001d042446_P001 | Maize | extracellular | 68.46 | 69.02 |
| Zm00001d012120_P001 | Maize | endoplasmic reticulum | 70.08 | 68.6 |
| EER90747 | Sorghum | endoplasmic reticulum | 68.46 | 66.67 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 56.33 | 58.22 |
| TraesCS6B01G379900.1 | Wheat | cytosol, mitochondrion, nucleus | 22.37 | 56.08 |
| TraesCS6B01G378700.1 | Wheat | cytosol, mitochondrion, nucleus | 22.37 | 56.08 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 53.64 | 55.9 |
| VIT_17s0000g09770.t01 | Wine grape | endoplasmic reticulum | 53.91 | 55.56 |
| KRH63669 | Soybean | endoplasmic reticulum | 54.18 | 55.52 |
| AT5G50260.1 | Thale cress | endoplasmic reticulum | 53.37 | 54.85 |
| CDY39574 | Canola | cytosol, endoplasmic reticulum, nucleus | 43.4 | 54.76 |
| Solyc05g013920.2.1 | Tomato | endoplasmic reticulum | 52.83 | 54.75 |
| PGSC0003DMT400039210 | Potato | endoplasmic reticulum | 53.1 | 54.72 |
| KRH54277 | Soybean | endoplasmic reticulum | 53.37 | 54.7 |
| TraesCS3B01G380400.1 | Wheat | golgi | 53.64 | 54.67 |
| PGSC0003DMT400027975 | Potato | endoplasmic reticulum | 52.56 | 54.62 |
| VIT_01s0137g00330.t01 | Wine grape | endoplasmic reticulum | 52.83 | 54.6 |
| Solyc03g111730.2.1 | Tomato | endoplasmic reticulum | 52.83 | 54.44 |
| TraesCS3B01G378600.1 | Wheat | endoplasmic reticulum | 53.91 | 54.2 |
| CDY34045 | Canola | endoplasmic reticulum | 51.75 | 53.19 |
| Bra000615.1-P | Field mustard | endoplasmic reticulum | 51.75 | 53.19 |
| KRH03891 | Soybean | endoplasmic reticulum | 54.18 | 53.03 |
| CDX83168 | Canola | endoplasmic reticulum | 51.48 | 52.91 |
| AT3G48340.1 | Thale cress | endoplasmic reticulum, extracellular | 49.87 | 51.25 |
| CDY48168 | Canola | endoplasmic reticulum | 49.33 | 50.97 |
| Bra018067.1-P | Field mustard | endoplasmic reticulum | 49.33 | 50.97 |
| TraesCS5B01G072400.1 | Wheat | extracellular | 45.28 | 49.85 |
| TraesCS1B01G033200.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 46.9 | 49.43 |
| TraesCS6B01G182200.1 | Wheat | extracellular | 45.55 | 49.42 |
| TraesCS6B01G182100.1 | Wheat | endoplasmic reticulum, extracellular | 45.28 | 49.12 |
| AT3G48350.1 | Thale cress | endoplasmic reticulum | 47.71 | 48.63 |
| TraesCS4B01G039600.1 | Wheat | extracellular | 44.47 | 48.39 |
| TraesCS6B01G378900.1 | Wheat | extracellular | 44.2 | 48.38 |
| TraesCS4B01G039700.1 | Wheat | extracellular | 44.2 | 48.09 |
| TraesCS4B01G039800.1 | Wheat | extracellular | 44.2 | 48.09 |
| TraesCS6B01G379000.1 | Wheat | extracellular | 43.94 | 48.08 |
| TraesCS5B01G138300.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 46.09 | 48.03 |
| TraesCS4B01G039900.1 | Wheat | endoplasmic reticulum, extracellular | 43.94 | 47.8 |
| TraesCS1B01G236800.1 | Wheat | extracellular | 43.67 | 47.79 |
| TraesCS4B01G039500.1 | Wheat | extracellular | 43.67 | 47.51 |
| TraesCS6B01G379200.1 | Wheat | extracellular | 43.4 | 47.49 |
| TraesCS6B01G380200.1 | Wheat | extracellular | 43.4 | 47.49 |
| TraesCS2B01G067700.1 | Wheat | extracellular | 43.4 | 47.35 |
| TraesCS2B01G067800.1 | Wheat | extracellular | 43.4 | 47.35 |
| TraesCS4B01G040000.1 | Wheat | endoplasmic reticulum, extracellular | 43.4 | 47.21 |
| TraesCS6B01G380000.1 | Wheat | extracellular | 43.13 | 47.2 |
| TraesCS6B01G378400.1 | Wheat | extracellular | 43.13 | 47.2 |
| TraesCS7B01G387600.1 | Wheat | extracellular | 43.13 | 47.06 |
| TraesCS2B01G067900.1 | Wheat | extracellular | 43.13 | 47.06 |
| CDY39575 | Canola | endoplasmic reticulum | 46.63 | 47.01 |
| TraesCS4B01G076200.1 | Wheat | endoplasmic reticulum | 50.67 | 47.0 |
| Bra018066.1-P | Field mustard | endoplasmic reticulum | 46.36 | 46.74 |
| TraesCS6B01G379300.1 | Wheat | extracellular | 42.32 | 46.31 |
| TraesCS2B01G068000.1 | Wheat | extracellular, golgi, plastid | 36.12 | 46.21 |
| TraesCS5B01G523100.1 | Wheat | extracellular | 42.32 | 46.18 |
| TraesCS7B01G292000.1 | Wheat | cytosol, extracellular, nucleus | 37.74 | 45.6 |
| TraesCS6B01G308300.1 | Wheat | extracellular, vacuole | 40.7 | 42.06 |
| TraesCS2B01G577300.1 | Wheat | extracellular, golgi | 47.71 | 37.74 |
| TraesCS2B01G577500.1 | Wheat | endoplasmic reticulum | 47.44 | 37.61 |
| TraesCS2B01G540100.2 | Wheat | golgi | 46.09 | 36.93 |
| TraesCS2B01G576300.1 | Wheat | unclear | 44.74 | 35.39 |
| TraesCS7B01G162200.1 | Wheat | endoplasmic reticulum | 43.67 | 35.14 |
| TraesCS1B01G338500.1 | Wheat | endoplasmic reticulum, unclear | 41.24 | 33.12 |
Protein Annotations
| Gene3D:3.90.70.10 | MapMan:50.3.4 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006508 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 | PFAM:PF00112 | PFAM:PF08246 |
| PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00639 | ScanProsite:PS00640 | PANTHER:PTHR12411 | PANTHER:PTHR12411:SF346 |
| InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS | InterPro:Pept_his_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C |
| InterPro:Prot_inhib_I29 | SMART:SM00645 | SMART:SM00848 | SUPFAM:SSF54001 | SignalP:SignalP-noTM | EnsemblPlantsGene:TraesCS3B01G447500 |
| EnsemblPlants:TraesCS3B01G447500.1 | TIGR:cd02248 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3B:+:686524485..686525600
Molecular Weight (calculated)
39898.8 Da
IEP (calculated)
6.508
GRAVY (calculated)
-0.332
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MGQLSKKLLV AAVLAVAAVE LCGAIPLEDK DLESEAALWD LYERWQTAHR VPRHHAEKHR RFGTFKSNAH FVHSHNKRSD RPYRLHLNRF GDMSQAEFRA
101: TFVGDLRRDT PATPPSVPGF MYATVNVSDL PPSVDWRQKG AVTGVKDQGK CGSCWAFSTV VSVEGINAIR TGSLVSLSEQ ELIDCDTADN DGCQGGLMDN
201: AFEYIKNNGG LITEAAYPYR AANGTCNVAT AAKSSPVVVR IDGHQDVPAN SEEALAQAVA NQPVSVAVEA SGKAFMFYSE GVFTGSCGTE LDHGVAVVGY
301: GVAEDGKAYW TVKNSWGPSW GEQGYIRVEK DSGAAGGLCG IAMEASYPVK TDSKPKPTPT PRRALGARES Q
101: TFVGDLRRDT PATPPSVPGF MYATVNVSDL PPSVDWRQKG AVTGVKDQGK CGSCWAFSTV VSVEGINAIR TGSLVSLSEQ ELIDCDTADN DGCQGGLMDN
201: AFEYIKNNGG LITEAAYPYR AANGTCNVAT AAKSSPVVVR IDGHQDVPAN SEEALAQAVA NQPVSVAVEA SGKAFMFYSE GVFTGSCGTE LDHGVAVVGY
301: GVAEDGKAYW TVKNSWGPSW GEQGYIRVEK DSGAAGGLCG IAMEASYPVK TDSKPKPTPT PRRALGARES Q
001: MGFLKPTMAI LFLAMVAVSS AVDMSIISYD EKHGVSTTGG RSEAEVMSIY EAWLVKHGKA QSQNSLVEKD RRFEIFKDNL RFVDEHNEKN LSYRLGLTRF
101: ADLTNDEYRS KYLGAKMEKK GERRTSLRYE ARVGDELPES IDWRKKGAVA EVKDQGGCGS CWAFSTIGAV EGINQIVTGD LITLSEQELV DCDTSYNEGC
201: NGGLMDYAFE FIIKNGGIDT DKDYPYKGVD GTCDQIRKNA KVVTIDSYED VPTYSEESLK KAVAHQPISI AIEAGGRAFQ LYDSGIFDGS CGTQLDHGVV
301: AVGYGTENGK DYWIVRNSWG KSWGESGYLR MARNIASSSG KCGIAIEPSY PIKNGENPPN PGPSPPSPIK PPTQCDSYYT CPESNTCCCL FEYGKYCFAW
401: GCCPLEAATC CDDNYSCCPH EYPVCDLDQG TCLLSKNSPF SVKALKRKPA TPFWSQGRKN IA
101: ADLTNDEYRS KYLGAKMEKK GERRTSLRYE ARVGDELPES IDWRKKGAVA EVKDQGGCGS CWAFSTIGAV EGINQIVTGD LITLSEQELV DCDTSYNEGC
201: NGGLMDYAFE FIIKNGGIDT DKDYPYKGVD GTCDQIRKNA KVVTIDSYED VPTYSEESLK KAVAHQPISI AIEAGGRAFQ LYDSGIFDGS CGTQLDHGVV
301: AVGYGTENGK DYWIVRNSWG KSWGESGYLR MARNIASSSG KCGIAIEPSY PIKNGENPPN PGPSPPSPIK PPTQCDSYYT CPESNTCCCL FEYGKYCFAW
401: GCCPLEAATC CDDNYSCCPH EYPVCDLDQG TCLLSKNSPF SVKALKRKPA TPFWSQGRKN IA
Arabidopsis Description
RD21ARD21A [Source:UniProtKB/TrEMBL;Acc:A0A178WIH7]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.