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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 5
  • golgi 5
  • plasma membrane 5
  • endoplasmic reticulum 8
  • vacuole 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra000615.1-P Field mustard endoplasmic reticulum 99.72 99.72
CDY34045 Canola endoplasmic reticulum 97.51 97.51
AT5G50260.1 Thale cress endoplasmic reticulum 89.2 89.2
VIT_17s0000g09770.t01 Wine grape endoplasmic reticulum 70.36 70.56
CDY39574 Canola cytosol, endoplasmic reticulum, nucleus 56.79 69.73
KRH54277 Soybean endoplasmic reticulum 69.53 69.34
KRH63669 Soybean endoplasmic reticulum 69.53 69.34
PGSC0003DMT400039210 Potato endoplasmic reticulum 68.98 69.17
Solyc03g111730.2.1 Tomato endoplasmic reticulum 68.98 69.17
CDY48168 Canola endoplasmic reticulum 65.93 66.3
GSMUA_AchrUn_... Banana endoplasmic reticulum 63.99 64.35
KRH03891 Soybean endoplasmic reticulum 65.65 62.53
CDY39575 Canola endoplasmic reticulum 62.88 61.68
TraesCS4A01G238600.1 Wheat nucleus 60.11 59.62
TraesCS3B01G380400.1 Wheat golgi 59.56 59.07
TraesCS3D01G340500.1 Wheat endoplasmic reticulum 59.56 59.07
GSMUA_Achr10P... Banana endoplasmic reticulum 58.17 58.99
TraesCS3A01G346900.1 Wheat endoplasmic reticulum 59.28 58.79
TraesCS3A01G348500.1 Wheat endoplasmic reticulum 59.28 58.79
HORVU3Hr1G088270.2 Barley extracellular 59.83 58.54
TraesCS3B01G378600.1 Wheat endoplasmic reticulum 59.56 58.27
EES09937 Sorghum endoplasmic reticulum 59.83 58.22
EES15197 Sorghum endoplasmic reticulum 59.83 58.06
TraesCS4D01G074800.1 Wheat endoplasmic reticulum 59.83 58.06
HORVU3Hr1G088080.2 Barley endoplasmic reticulum, extracellular 59.83 57.75
Os08t0556900-01 Rice extracellular 60.39 56.62
Zm00001d031971_P002 Maize endoplasmic reticulum 54.02 56.36
Os11t0255300-01 Rice extracellular 58.45 55.82
EES01927 Sorghum extracellular 56.23 55.01
Zm00001d042446_P001 Maize extracellular 55.96 54.89
TraesCS4B01G076200.1 Wheat endoplasmic reticulum 60.11 54.25
Os01t0907600-01 Rice extracellular 55.68 54.18
Zm00001d012120_P001 Maize endoplasmic reticulum 55.96 53.3
Zm00001d007464_P001 Maize endoplasmic reticulum 56.51 53.12
TraesCS3D01G407600.1 Wheat endoplasmic reticulum 55.4 53.05
TraesCS3B01G447400.1 Wheat endoplasmic reticulum 54.85 52.94
TraesCS3D01G342100.2 Wheat endoplasmic reticulum 57.89 52.91
HORVU3Hr1G091920.2 Barley endoplasmic reticulum 54.57 52.81
TraesCS3A01G412900.1 Wheat endoplasmic reticulum 55.12 52.79
HORVU3Hr1G091800.1 Barley endoplasmic reticulum 55.4 52.77
EER90747 Sorghum endoplasmic reticulum 55.68 52.76
HORVU3Hr1G091790.1 Barley extracellular 54.29 52.55
TraesCS3A01G413000.1 Wheat endoplasmic reticulum 52.91 51.76
CDY01351 Canola endoplasmic reticulum 50.14 51.57
CDY31861 Canola endoplasmic reticulum 50.42 51.56
TraesCS3B01G447500.1 Wheat extracellular, vacuole 52.91 51.48
TraesCS3A01G413200.1 Wheat endoplasmic reticulum 53.19 51.2
TraesCS3D01G407700.1 Wheat endoplasmic reticulum 53.19 51.2
CDY58055 Canola golgi, nucleus, plastid 45.43 50.93
CDX96617 Canola endoplasmic reticulum 45.15 49.85
CDX75496 Canola endoplasmic reticulum 49.03 49.72
CDY33651 Canola endoplasmic reticulum 44.88 49.69
CDY50483 Canola endoplasmic reticulum 46.54 48.55
CDX87758 Canola endoplasmic reticulum 46.26 48.27
CDX77621 Canola endoplasmic reticulum, extracellular 44.88 47.23
CDX69132 Canola plastid 49.58 47.11
CDY17193 Canola endoplasmic reticulum 40.72 46.23
CDY22445 Canola vacuole 45.98 44.38
CDX75633 Canola vacuole 45.15 43.58
CDX69285 Canola endoplasmic reticulum, vacuole 44.88 43.32
CDY44047 Canola vacuole 45.71 42.97
CDY25283 Canola vacuole 41.83 40.48
CDY37617 Canola endoplasmic reticulum, extracellular 41.27 40.27
CDY31498 Canola cytosol 32.96 39.8
CDX71540 Canola extracellular 50.69 39.78
CDY25228 Canola extracellular 50.69 39.78
CDY22370 Canola extracellular 50.69 39.78
CDY25281 Canola extracellular 40.72 39.62
CDY06760 Canola endoplasmic reticulum 49.86 39.39
CDY17093 Canola endoplasmic reticulum 49.03 38.73
CDX95457 Canola endoplasmic reticulum, extracellular, vacuole 47.92 38.53
CDY46179 Canola endoplasmic reticulum 47.92 38.44
CDY63586 Canola endoplasmic reticulum 48.75 38.34
CDY17044 Canola endoplasmic reticulum 48.75 38.34
CDY16132 Canola endoplasmic reticulum, extracellular, vacuole 40.17 38.26
CDY50157 Canola endoplasmic reticulum, extracellular, vacuole 47.37 38.08
CDY63262 Canola extracellular, plasma membrane, vacuole 26.04 37.9
CDY50154 Canola endoplasmic reticulum 44.32 36.36
CDX95451 Canola endoplasmic reticulum, extracellular, vacuole 44.32 36.36
CDX93470 Canola plasma membrane 42.11 34.31
CDX94938 Canola extracellular, vacuole 41.83 34.16
CDX99227 Canola endoplasmic reticulum 47.92 34.12
CDY27951 Canola endoplasmic reticulum 40.44 31.81
CDY02431 Canola nucleus 37.95 30.51
Protein Annotations
MapMan:19.4.1.1Gene3D:3.90.70.10GO:A0A078D7E8MEROPS:C01.A03EnsemblPlants:CDX83168ProteinID:CDX83168
ProteinID:CDX83168.1GO:GO:0003674GO:GO:0003824GO:GO:0006508GO:GO:0008150GO:GO:0008152
GO:GO:0008234GO:GO:0016787GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00138697001PFAM:PF00112PFAM:PF08246
PRINTS:PR00705ScanProsite:PS00139ScanProsite:PS00639ScanProsite:PS00640PANTHER:PTHR12411PANTHER:PTHR12411:SF524
InterPro:Papain_like_cys_pep_sfInterPro:Pept_asp_ASInterPro:Pept_cys_ASInterPro:Pept_his_ASInterPro:Peptidase_C1AInterPro:Peptidase_C1A_C
InterPro:Prot_inhib_I29SMART:SM00645SMART:SM00848SUPFAM:SSF54001SignalP:SignalP-noTMUniParc:UPI0004EE6176
SEG:seg:::::
Description
BnaA03g23380D
Coordinates
chrLK031832:-:182450..184098
Molecular Weight (calculated)
40798.0 Da
IEP (calculated)
6.379
GRAVY (calculated)
-0.628
Length
361 amino acids
Sequence
(BLAST)
001: MKRFIVLFLC LLMVLETTKG LDIHDKDVES EDSLWELYER WRSHHTIARS FEEKAKRFNV FKHNVRHIHE TNKKEKPYKL KLNKFGDMTT EEFRRSYAGS
101: NIKHHRMLKG ERRATGKFMY ANVNALPTSV DWRKNGAVTP VKNQGQCGDC WAFSTVVAVE GINQIRTNEL TSLSEQELVD CDTNENQGCS GGLMDLAFEF
201: IKEKGGLTSE IVYPYQASDE TCDKNKENAP VVSIDGHEDV PENSEDDLMK AVAHQPVSVA IDAGSSDFQF YSEGVFTGRC GTELNHGVAA VGYGTTIDRT
301: KYWIVKNSWG EEWGEKGYIR MQRGIRHKEG LCGIAMEASY PVKNSNTNPS GPTSTTLKDE L
Best Arabidopsis Sequence Match ( AT5G50260.1 )
(BLAST)
001: MKRFIVLALC MLMVLETTKG LDFHNKDVES ENSLWELYER WRSHHTVARS LEEKAKRFNV FKHNVKHIHE TNKKDKSYKL KLNKFGDMTS EEFRRTYAGS
101: NIKHHRMFQG EKKATKSFMY ANVNTLPTSV DWRKNGAVTP VKNQGQCGSC WAFSTVVAVE GINQIRTKKL TSLSEQELVD CDTNQNQGCN GGLMDLAFEF
201: IKEKGGLTSE LVYPYKASDE TCDTNKENAP VVSIDGHEDV PKNSEDDLMK AVANQPVSVA IDAGGSDFQF YSEGVFTGRC GTELNHGVAV VGYGTTIDGT
301: KYWIVKNSWG EEWGEKGYIR MQRGIRHKEG LCGIAMEASY PLKNSNTNPS RLSLDSLKDE L
Arabidopsis Description
CEP1KDEL-tailed cysteine endopeptidase CEP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGR9]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.