Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
26228564
|
msms PMID:
26228564
doi
Blaise Pascal University, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, Avenue des Landais, F-63 170 Aubière, France., CNRS, PAPPSO, UMR 0320/8120 Génétique Quantitative et Évolution - Le Moulon, F-91190 Gif-sur-Yvette, France., INRA, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, 5 chemin de Beaulieu, F-63 039 Clermont-Ferrand, France.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G074800.1 | Wheat | endoplasmic reticulum | 96.7 | 94.62 |
| TraesCS4B01G076200.1 | Wheat | endoplasmic reticulum | 95.88 | 87.25 |
| EES09937 | Sorghum | endoplasmic reticulum | 75.0 | 73.58 |
| Os11t0255300-01 | Rice | extracellular | 76.37 | 73.55 |
| Zm00001d007464_P001 | Maize | endoplasmic reticulum | 72.25 | 68.49 |
| TraesCS4A01G273900.1 | Wheat | cytosol, nucleus, plastid | 16.76 | 64.21 |
| VIT_01s0137g00330.t01 | Wine grape | endoplasmic reticulum | 62.91 | 63.79 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 62.64 | 63.51 |
| Solyc03g111730.2.1 | Tomato | endoplasmic reticulum | 62.64 | 63.33 |
| TraesCS2A01G054600.1 | Wheat | cytosol, nucleus, plastid | 16.48 | 63.16 |
| TraesCS2A01G054500.1 | Wheat | cytosol, nucleus, plastid | 16.48 | 63.16 |
| PGSC0003DMT400039210 | Potato | endoplasmic reticulum | 62.36 | 63.06 |
| KRH63669 | Soybean | endoplasmic reticulum | 62.09 | 62.43 |
| CDY39574 | Canola | cytosol, endoplasmic reticulum, nucleus | 50.27 | 62.24 |
| VIT_17s0000g09770.t01 | Wine grape | endoplasmic reticulum | 61.54 | 62.22 |
| TraesCS3A01G346900.1 | Wheat | endoplasmic reticulum | 61.81 | 61.81 |
| TraesCS3A01G348500.1 | Wheat | endoplasmic reticulum | 61.81 | 61.81 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 60.44 | 61.8 |
| KRH54277 | Soybean | endoplasmic reticulum | 60.99 | 61.33 |
| TraesCS6A01G346400.1 | Wheat | cytosol | 15.93 | 61.05 |
| AT5G50260.1 | Thale cress | endoplasmic reticulum | 59.89 | 60.39 |
| Bra000615.1-P | Field mustard | endoplasmic reticulum | 59.89 | 60.39 |
| TraesCS2A01G054800.1 | Wheat | cytosol, mitochondrion, nucleus | 24.45 | 60.14 |
| CDX83168 | Canola | endoplasmic reticulum | 59.62 | 60.11 |
| CDY34045 | Canola | endoplasmic reticulum | 59.34 | 59.83 |
| Solyc05g013920.2.1 | Tomato | endoplasmic reticulum | 58.52 | 59.5 |
| PGSC0003DMT400027975 | Potato | endoplasmic reticulum | 57.69 | 58.82 |
| CDY48168 | Canola | endoplasmic reticulum | 57.42 | 58.22 |
| AT3G48340.1 | Thale cress | endoplasmic reticulum, extracellular | 57.69 | 58.17 |
| TraesCS6A01G345600.1 | Wheat | cytosol, mitochondrion, nucleus | 23.63 | 58.11 |
| KRH03891 | Soybean | endoplasmic reticulum | 60.44 | 58.05 |
| Bra018067.1-P | Field mustard | endoplasmic reticulum | 57.14 | 57.94 |
| Bra018066.1-P | Field mustard | endoplasmic reticulum | 56.04 | 55.43 |
| CDY39575 | Canola | endoplasmic reticulum | 55.77 | 55.16 |
| AT3G48350.1 | Thale cress | endoplasmic reticulum | 54.95 | 54.95 |
| TraesCS3A01G412900.1 | Wheat | endoplasmic reticulum | 54.4 | 52.52 |
| TraesCS6A01G154300.1 | Wheat | extracellular | 48.9 | 52.05 |
| TraesCS3A01G413000.1 | Wheat | endoplasmic reticulum | 52.75 | 52.03 |
| TraesCS3A01G413200.1 | Wheat | endoplasmic reticulum | 53.02 | 51.47 |
| TraesCS4A01G274100.1 | Wheat | extracellular | 47.25 | 51.19 |
| TraesCS4A01G274000.1 | Wheat | extracellular | 47.25 | 50.44 |
| TraesCS1A01G027300.1 | Wheat | endoplasmic reticulum | 48.63 | 50.43 |
| TraesCS1A01G223500.1 | Wheat | extracellular | 46.7 | 50.15 |
| TraesCS4A01G273800.1 | Wheat | extracellular | 46.98 | 50.15 |
| TraesCS6A01G346600.1 | Wheat | extracellular | 45.88 | 49.26 |
| TraesCS6A01G345900.1 | Wheat | extracellular | 45.6 | 48.97 |
| TraesCS6A01G346800.1 | Wheat | extracellular | 45.6 | 48.97 |
| TraesCS6A01G346500.1 | Wheat | extracellular | 37.36 | 48.4 |
| TraesCS2A01G056000.1 | Wheat | endoplasmic reticulum, extracellular | 44.23 | 48.06 |
| TraesCS5A01G138700.1 | Wheat | plastid | 49.73 | 48.01 |
| TraesCS5A01G391500.1 | Wheat | endoplasmic reticulum, extracellular | 45.05 | 47.4 |
| TraesCS6A01G279500.1 | Wheat | endoplasmic reticulum, extracellular | 43.68 | 44.17 |
| TraesCS4A01G273700.1 | Wheat | extracellular | 36.26 | 43.56 |
| TraesCS2A01G054700.1 | Wheat | cytosol, mitochondrion, nucleus | 12.09 | 41.12 |
| TraesCS2A01G512100.1 | Wheat | extracellular | 50.27 | 39.7 |
| TraesCS2A01G546700.1 | Wheat | endoplasmic reticulum | 47.8 | 37.18 |
| TraesCS7A01G264200.1 | Wheat | endoplasmic reticulum | 47.8 | 36.71 |
| TraesCS2A01G546300.1 | Wheat | endoplasmic reticulum, vacuole | 46.98 | 36.46 |
| TraesCS2A01G545700.1 | Wheat | unclear | 47.25 | 36.44 |
| TraesCS1A01G325400.1 | Wheat | extracellular | 42.86 | 34.44 |
Protein Annotations
| MapMan:19.4.1.1 | Gene3D:3.90.70.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006508 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 | PFAM:PF00112 | PFAM:PF08246 |
| PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00639 | ScanProsite:PS00640 | PANTHER:PTHR12411 | PANTHER:PTHR12411:SF533 |
| InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS | InterPro:Pept_his_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C |
| InterPro:Prot_inhib_I29 | SMART:SM00645 | SMART:SM00848 | SUPFAM:SSF54001 | SignalP:SignalP-noTM | EnsemblPlantsGene:TraesCS4A01G238600 |
| EnsemblPlants:TraesCS4A01G238600.1 | TIGR:cd02248 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr4A:-:547978932..547980325
Molecular Weight (calculated)
39994.4 Da
IEP (calculated)
5.454
GRAVY (calculated)
-0.574
Length
364 amino acids
Sequence
(BLAST)
(BLAST)
001: MWRSILLAAV VALALAPAPA LGIPFREEDL ASEESLRGLY ERWRSHYTVS RGGLGADAEE RRFNVFKENA RYVHEGNKKD RPFRLALNKF ADMTTDEFRR
101: TYAGSRVRHH LSLSGGRRGD GSFRYEDANN LPPAVDWRQK GAVTGIKDQG QCGSCWAFST IVAVEGINKI RTGKLVSLSE QELMDCDNVN NQGCDGGLMD
201: YAFQFIHKNG ITTESNYPYQ GEQGSCDQAK EKAHAVTIDG YEDVPANDES ALQKAVAGQP VSVAIDASGN DFQFYSEGVF TGECSTDLDH GVAAVGYGTT
301: RDGTKYWIVK NSWGEDWGEK GYIRMQRGVS QAEGQCGIAM QASYPTKSAP HASTVRDGSH TDEL
101: TYAGSRVRHH LSLSGGRRGD GSFRYEDANN LPPAVDWRQK GAVTGIKDQG QCGSCWAFST IVAVEGINKI RTGKLVSLSE QELMDCDNVN NQGCDGGLMD
201: YAFQFIHKNG ITTESNYPYQ GEQGSCDQAK EKAHAVTIDG YEDVPANDES ALQKAVAGQP VSVAIDASGN DFQFYSEGVF TGECSTDLDH GVAAVGYGTT
301: RDGTKYWIVK NSWGEDWGEK GYIRMQRGVS QAEGQCGIAM QASYPTKSAP HASTVRDGSH TDEL
001: MKRFIVLALC MLMVLETTKG LDFHNKDVES ENSLWELYER WRSHHTVARS LEEKAKRFNV FKHNVKHIHE TNKKDKSYKL KLNKFGDMTS EEFRRTYAGS
101: NIKHHRMFQG EKKATKSFMY ANVNTLPTSV DWRKNGAVTP VKNQGQCGSC WAFSTVVAVE GINQIRTKKL TSLSEQELVD CDTNQNQGCN GGLMDLAFEF
201: IKEKGGLTSE LVYPYKASDE TCDTNKENAP VVSIDGHEDV PKNSEDDLMK AVANQPVSVA IDAGGSDFQF YSEGVFTGRC GTELNHGVAV VGYGTTIDGT
301: KYWIVKNSWG EEWGEKGYIR MQRGIRHKEG LCGIAMEASY PLKNSNTNPS RLSLDSLKDE L
101: NIKHHRMFQG EKKATKSFMY ANVNTLPTSV DWRKNGAVTP VKNQGQCGSC WAFSTVVAVE GINQIRTKKL TSLSEQELVD CDTNQNQGCN GGLMDLAFEF
201: IKEKGGLTSE LVYPYKASDE TCDTNKENAP VVSIDGHEDV PKNSEDDLMK AVANQPVSVA IDAGGSDFQF YSEGVFTGRC GTELNHGVAV VGYGTTIDGT
301: KYWIVKNSWG EEWGEKGYIR MQRGIRHKEG LCGIAMEASY PLKNSNTNPS RLSLDSLKDE L
Arabidopsis Description
CEP1KDEL-tailed cysteine endopeptidase CEP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGR9]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.