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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 6
  • golgi 5
  • plasma membrane 5
  • endoplasmic reticulum 8
  • vacuole 6
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d007464_P001 Maize endoplasmic reticulum 80.86 78.12
Os11t0255300-01 Rice extracellular 77.63 76.19
TraesCS4A01G238600.1 Wheat nucleus 73.58 75.0
TraesCS4D01G074800.1 Wheat endoplasmic reticulum 73.32 73.12
TraesCS4B01G076200.1 Wheat endoplasmic reticulum 73.05 67.75
GSMUA_AchrUn_... Banana endoplasmic reticulum 61.19 63.23
CDY39574 Canola cytosol, endoplasmic reticulum, nucleus 48.79 61.56
PGSC0003DMT400039210 Potato endoplasmic reticulum 59.57 61.39
VIT_17s0000g09770.t01 Wine grape endoplasmic reticulum 59.3 61.11
Solyc03g111730.2.1 Tomato endoplasmic reticulum 58.76 60.56
GSMUA_Achr10P... Banana endoplasmic reticulum 57.95 60.39
AT5G50260.1 Thale cress endoplasmic reticulum 58.76 60.39
Bra000615.1-P Field mustard endoplasmic reticulum 58.49 60.11
EES15197 Sorghum endoplasmic reticulum 60.11 59.95
CDY34045 Canola endoplasmic reticulum 58.22 59.83
CDX83168 Canola endoplasmic reticulum 58.22 59.83
Solyc05g013920.2.1 Tomato endoplasmic reticulum 57.68 59.78
PGSC0003DMT400027975 Potato endoplasmic reticulum 57.14 59.38
KRH63669 Soybean endoplasmic reticulum 57.68 59.12
VIT_01s0137g00330.t01 Wine grape endoplasmic reticulum 57.14 59.05
KRH54277 Soybean endoplasmic reticulum 56.87 58.29
CDY48168 Canola endoplasmic reticulum 55.8 57.66
Bra018067.1-P Field mustard endoplasmic reticulum 55.53 57.38
AT3G48340.1 Thale cress endoplasmic reticulum, extracellular 55.26 56.79
KRH03891 Soybean endoplasmic reticulum 57.41 56.2
KXG19778 Sorghum cytosol, nucleus, plastid 46.36 55.84
EES01927 Sorghum extracellular 54.45 54.74
AT3G48350.1 Thale cress endoplasmic reticulum 53.1 54.12
Bra018066.1-P Field mustard endoplasmic reticulum 53.1 53.53
CDY39575 Canola endoplasmic reticulum 53.1 53.53
KXG19777 Sorghum extracellular 49.06 53.53
EER89590 Sorghum extracellular 49.06 53.53
OQU81188 Sorghum cytosol, nucleus, plastid 39.35 52.9
KXG19775 Sorghum extracellular 48.25 52.65
EES10550 Sorghum extracellular 48.25 52.65
EER90747 Sorghum endoplasmic reticulum 53.91 52.49
KXG25861 Sorghum endoplasmic reticulum 46.63 51.34
KXG25862 Sorghum endoplasmic reticulum 46.63 51.34
KXG25863 Sorghum endoplasmic reticulum 46.63 51.34
EES10461 Sorghum endoplasmic reticulum 46.36 50.89
EES10463 Sorghum endoplasmic reticulum 46.09 50.59
OQU81187 Sorghum endoplasmic reticulum, extracellular 46.9 50.14
EES02142 Sorghum vacuole 50.67 49.74
KXG21060 Sorghum endoplasmic reticulum, golgi, vacuole 48.25 48.25
KXG20680 Sorghum endoplasmic reticulum, extracellular, vacuole 44.47 46.09
EER93437 Sorghum endoplasmic reticulum 43.67 45.89
EES07368 Sorghum extracellular 42.59 44.38
EER88857 Sorghum endoplasmic reticulum 44.47 44.35
KXG27269 Sorghum endoplasmic reticulum 52.02 41.59
EER88858 Sorghum golgi, vacuole 43.94 41.06
EES13064 Sorghum extracellular, plasma membrane, vacuole 45.82 36.4
EES11628 Sorghum extracellular 45.82 36.09
EES18460 Sorghum endoplasmic reticulum 42.59 34.2
Protein Annotations
MapMan:19.4.1.1Gene3D:3.90.70.10EntrezGene:8059337UniProt:C5Y4D0EnsemblPlants:EES09937ProteinID:EES09937
ProteinID:EES09937.1GO:GO:0003674GO:GO:0003824GO:GO:0004197GO:GO:0005575GO:GO:0005576
GO:GO:0005615GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005764GO:GO:0005773
GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0008234GO:GO:0009056
GO:GO:0009987GO:GO:0016787GO:GO:0019538GO:GO:0051603PFAM:PF00112PFAM:PF08246
PRINTS:PR00705ScanProsite:PS00139ScanProsite:PS00639ScanProsite:PS00640PANTHER:PTHR12411PANTHER:PTHR12411:SF533
InterPro:Papain_like_cys_pep_sfInterPro:Pept_asp_ASInterPro:Pept_cys_ASInterPro:Pept_his_ASInterPro:Peptidase_C1AInterPro:Peptidase_C1A_C
InterPro:Prot_inhib_I29SMART:SM00645SMART:SM00848EnsemblPlantsGene:SORBI_3005G151700SUPFAM:SSF54001unigene:Sbi.3343
SignalP:SignalP-noTMUniParc:UPI0001A867E5RefSeq:XP_002450949.1SEG:seg::
Description
hypothetical protein
Coordinates
chr5:-:62172021..62173744
Molecular Weight (calculated)
41028.1 Da
IEP (calculated)
6.780
GRAVY (calculated)
-0.455
Length
371 amino acids
Sequence
(BLAST)
001: MLRCLVLAAV SLALLVLAPP ARAGIPFTEK DLASEESLRA LYEQWRSHYM VSRPAGLQEQ DDKARWFNVF KENVRYIHEA NKKGRSFRLA LNKFADMTTD
101: EFRRAYAAGS RTRHHRALSS GIRRHGDGSF MYAQAGNLPL AVDWRQRGAV TGIKDQGQCG SCWAFSTIAA VEGINKIRTG KLVSLSEQEL VDCDDVDNQG
201: CNGGLMDYAF QYIKRNGGIT TESNYPYLAE QRSCNKAKER SHDVTIDGYE DVPANNEDAL QKAVANQPVS IAIEASGQDF QFYSEGVFTG SCGTELDHGV
301: AAVGYGITRD GTKYWIVKNS WGEDWGERGY IRMQRGISDS QGLCGIAMEP SYPTKIATTH GAIMTDGHAS Y
Best Arabidopsis Sequence Match ( AT5G50260.1 )
(BLAST)
001: MKRFIVLALC MLMVLETTKG LDFHNKDVES ENSLWELYER WRSHHTVARS LEEKAKRFNV FKHNVKHIHE TNKKDKSYKL KLNKFGDMTS EEFRRTYAGS
101: NIKHHRMFQG EKKATKSFMY ANVNTLPTSV DWRKNGAVTP VKNQGQCGSC WAFSTVVAVE GINQIRTKKL TSLSEQELVD CDTNQNQGCN GGLMDLAFEF
201: IKEKGGLTSE LVYPYKASDE TCDTNKENAP VVSIDGHEDV PKNSEDDLMK AVANQPVSVA IDAGGSDFQF YSEGVFTGRC GTELNHGVAV VGYGTTIDGT
301: KYWIVKNSWG EEWGEKGYIR MQRGIRHKEG LCGIAMEASY PLKNSNTNPS RLSLDSLKDE L
Arabidopsis Description
CEP1KDEL-tailed cysteine endopeptidase CEP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGR9]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.