CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER88857	Sorghum	endoplasmic reticulum	67.32	64.78
EER88858	Sorghum	golgi, vacuole	68.72	61.96
AT4G23520.1	Thale cress	endoplasmic reticulum	47.77	48.03
Bra013705.1-P	Field mustard	extracellular	43.85	47.87
OQU81188	Sorghum	cytosol, nucleus, plastid	36.31	47.1
EES10463	Sorghum	endoplasmic reticulum	44.13	46.75
KXG25863	Sorghum	endoplasmic reticulum	43.85	46.59
KXG25861	Sorghum	endoplasmic reticulum	43.85	46.59
KXG25862	Sorghum	endoplasmic reticulum	43.85	46.59
EES10461	Sorghum	endoplasmic reticulum	43.85	46.45
KXG19778	Sorghum	cytosol, nucleus, plastid	39.39	45.78
EES01927	Sorghum	extracellular	46.93	45.53
AT4G11310.1	Thale cress	endoplasmic reticulum	45.81	45.05
EER93437	Sorghum	endoplasmic reticulum	44.41	45.04
KXG19775	Sorghum	extracellular	42.74	45.0
EES10550	Sorghum	extracellular	42.74	45.0
OQU81187	Sorghum	endoplasmic reticulum, extracellular	43.58	44.96
KXG19777	Sorghum	extracellular	42.46	44.71
EER90747	Sorghum	endoplasmic reticulum	47.49	44.62
EES09937	Sorghum	endoplasmic reticulum	46.09	44.47
EER89590	Sorghum	extracellular	42.18	44.41
KXG21060	Sorghum	endoplasmic reticulum, golgi, vacuole	45.81	44.2
CDY25281	Canola	extracellular	45.81	44.2
Bra033148.1-P	Field mustard	extracellular	45.81	44.2
CDY37617	Canola	endoplasmic reticulum, extracellular	45.53	44.05
EES15197	Sorghum	endoplasmic reticulum	45.53	43.82
KXG27269	Sorghum	endoplasmic reticulum	56.7	43.75
AT4G11320.1	Thale cress	endoplasmic reticulum	45.25	43.67
CDY25283	Canola	vacuole	45.25	43.43
Bra033146.1-P	Field mustard	vacuole	45.25	43.43
EES07368	Sorghum	extracellular	42.46	42.7
EES02142	Sorghum	vacuole	44.97	42.59
Bra024736.1-P	Field mustard	endoplasmic reticulum, extracellular	43.3	41.67
CDY63262	Canola	extracellular, plasma membrane, vacuole	28.77	41.53
CDY16132	Canola	endoplasmic reticulum, extracellular, vacuole	43.58	41.16
EES13064	Sorghum	extracellular, plasma membrane, vacuole	51.12	39.19
EES11628	Sorghum	extracellular	48.88	37.16
EES18460	Sorghum	endoplasmic reticulum	45.81	35.5

Protein Annotations

Gene3D:3.90.70.10	MapMan:50.3.4	UniProt:A0A194YL29	GO:GO:0003674	GO:GO:0003824	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008234	GO:GO:0016787	GO:GO:0019538
EnsemblPlants:KXG20680	ProteinID:KXG20680	ProteinID:KXG20680.1	PFAM:PF00112	PFAM:PF08246	PRINTS:PR00705
ScanProsite:PS00139	ScanProsite:PS00639	ScanProsite:PS00640	PANTHER:PTHR12411	PANTHER:PTHR12411:SF526	InterPro:Papain_like_cys_pep_sf
InterPro:Pept_asp_AS	InterPro:Pept_cys_AS	InterPro:Pept_his_AS	InterPro:Peptidase_C1A	InterPro:Peptidase_C1A_C	InterPro:Prot_inhib_I29
SMART:SM00645	SMART:SM00848	EnsemblPlantsGene:SORBI_3010G238900	SUPFAM:SSF54001	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0007F2037A	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:58087656..58090215

Molecular Weight (calculated)

38783.5 Da

IEP (calculated)

4.747

GRAVY (calculated)

-0.236

Length

358 amino acids

Sequence
(BLAST)

001: MSSARSPVAG AALALLALTV AVATATTVAA ARDLRSAAPL ERADEEVRQL YKTWKSEHGR PRDGISVADG LRLKVFRDNL RYIDAHNAEA DAGLHTFRLG
101: LTPFTDLTLE EFRAHALGFL NSTLPRVASD RYLPRAGDDL PDAVDWRQQG AVTGVKNQLD CGGCWAFSAV AAMEGINKIV TNNLISLSEQ ELIDCDTEDY
201: GCQGGEMQKA FQFVIDNGGI DTEADYPFIG TNGTCDAIRE KRKVVSIDSY ENVPTNDEEA LQKAVANQPV SVAIDSSSPA FQHYSSGIFN GPCGFILDHG
301: VTAVGYGSDN GEDFWIVKNS WGAEWGESGY IRMKRNVLLP MGKCGIAMYA SYPVKNGR

Best Arabidopsis Sequence Match ( AT1G47128.1 )
(BLAST)

001: MGFLKPTMAI LFLAMVAVSS AVDMSIISYD EKHGVSTTGG RSEAEVMSIY EAWLVKHGKA QSQNSLVEKD RRFEIFKDNL RFVDEHNEKN LSYRLGLTRF
101: ADLTNDEYRS KYLGAKMEKK GERRTSLRYE ARVGDELPES IDWRKKGAVA EVKDQGGCGS CWAFSTIGAV EGINQIVTGD LITLSEQELV DCDTSYNEGC
201: NGGLMDYAFE FIIKNGGIDT DKDYPYKGVD GTCDQIRKNA KVVTIDSYED VPTYSEESLK KAVAHQPISI AIEAGGRAFQ LYDSGIFDGS CGTQLDHGVV
301: AVGYGTENGK DYWIVRNSWG KSWGESGYLR MARNIASSSG KCGIAIEPSY PIKNGENPPN PGPSPPSPIK PPTQCDSYYT CPESNTCCCL FEYGKYCFAW
401: GCCPLEAATC CDDNYSCCPH EYPVCDLDQG TCLLSKNSPF SVKALKRKPA TPFWSQGRKN IA

Arabidopsis Description

RD21ARD21A [Source:UniProtKB/TrEMBL;Acc:A0A178WIH7]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.