Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 4
- vacuole 6
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G20850.1 | EES00059 | AT3G01340.1 | 21798944 |
| AT1G20850.1 | OQU89582 | AT3G01340.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d017834_P001 | Maize | extracellular | 77.53 | 88.75 |
| Os02t0715000-01 | Rice | endoplasmic reticulum | 78.93 | 76.78 |
| HORVU6Hr1G070320.2 | Barley | endoplasmic reticulum, extracellular | 74.44 | 72.8 |
| TraesCS6A01G279500.1 | Wheat | endoplasmic reticulum, extracellular | 73.6 | 72.78 |
| TraesCS6B01G308300.1 | Wheat | extracellular, vacuole | 73.03 | 72.42 |
| TraesCS6D01G259900.1 | Wheat | plastid | 73.31 | 69.05 |
| GSMUA_Achr2P04950_001 | Banana | endoplasmic reticulum, golgi | 61.24 | 62.46 |
| GSMUA_Achr3P03740_001 | Banana | endoplasmic reticulum | 61.52 | 62.04 |
| VIT_18s0122g00790.t01 | Wine grape | nucleus | 57.87 | 61.31 |
| Solyc04g082710.2.1 | Tomato | cytosol | 52.25 | 60.98 |
| Solyc12g094700.1.1 | Tomato | extracellular | 55.34 | 59.52 |
| VIT_03s0038g04000.t01 | Wine grape | vacuole | 58.71 | 59.38 |
| KRH60879 | Soybean | endoplasmic reticulum | 58.15 | 59.31 |
| Bra011608.1-P | Field mustard | endoplasmic reticulum | 59.27 | 59.27 |
| CDX75496 | Canola | endoplasmic reticulum | 59.27 | 59.27 |
| AT4G35350.1 | Thale cress | endoplasmic reticulum | 58.71 | 58.87 |
| KRH60878 | Soybean | endoplasmic reticulum | 57.58 | 58.74 |
| KRH51561 | Soybean | endoplasmic reticulum | 57.58 | 58.57 |
| KRH51560 | Soybean | endoplasmic reticulum | 57.3 | 58.29 |
| PGSC0003DMT400025691 | Potato | endoplasmic reticulum, extracellular | 57.02 | 57.02 |
| PGSC0003DMT400075600 | Potato | vacuole | 55.9 | 57.02 |
| CDY01351 | Canola | endoplasmic reticulum | 55.34 | 56.13 |
| CDX69132 | Canola | plastid | 59.83 | 56.05 |
| KXG21060 | Sorghum | endoplasmic reticulum, golgi, vacuole | 58.15 | 55.8 |
| Bra012252.1-P | Field mustard | endoplasmic reticulum | 54.49 | 55.11 |
| AT1G20850.1 | Thale cress | endoplasmic reticulum | 55.06 | 55.06 |
| Bra016447.1-P | Field mustard | endoplasmic reticulum, golgi, vacuole | 55.34 | 55.03 |
| CDY31861 | Canola | endoplasmic reticulum | 54.49 | 54.96 |
| CDY33651 | Canola | endoplasmic reticulum | 49.44 | 53.99 |
| EES02142 | Sorghum | vacuole | 57.3 | 53.97 |
| CDX96617 | Canola | endoplasmic reticulum | 49.44 | 53.82 |
| GSMUA_Achr3P11680_001 | Banana | endoplasmic reticulum, vacuole | 57.02 | 51.92 |
| KXG19778 | Sorghum | cytosol, nucleus, plastid | 41.85 | 48.38 |
| CDY31498 | Canola | cytosol | 38.76 | 46.15 |
| KXG19777 | Sorghum | extracellular | 43.26 | 45.29 |
| EER89590 | Sorghum | extracellular | 43.26 | 45.29 |
| OQU81188 | Sorghum | cytosol, nucleus, plastid | 34.83 | 44.93 |
| KXG19775 | Sorghum | extracellular | 42.7 | 44.71 |
| EES10550 | Sorghum | extracellular | 42.7 | 44.71 |
| EES15197 | Sorghum | endoplasmic reticulum | 46.07 | 44.09 |
| KXG25861 | Sorghum | endoplasmic reticulum | 41.57 | 43.92 |
| KXG25862 | Sorghum | endoplasmic reticulum | 41.57 | 43.92 |
| KXG25863 | Sorghum | endoplasmic reticulum | 41.57 | 43.92 |
| OQU81187 | Sorghum | endoplasmic reticulum, extracellular | 42.7 | 43.8 |
| EES10461 | Sorghum | endoplasmic reticulum | 41.57 | 43.79 |
| EES10463 | Sorghum | endoplasmic reticulum | 41.29 | 43.49 |
| EER93437 | Sorghum | endoplasmic reticulum | 42.98 | 43.34 |
| EES09937 | Sorghum | endoplasmic reticulum | 44.38 | 42.59 |
| KXG20680 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 42.7 | 42.46 |
| EES01927 | Sorghum | extracellular | 43.26 | 41.73 |
| EER90747 | Sorghum | endoplasmic reticulum | 44.1 | 41.21 |
| EER88857 | Sorghum | endoplasmic reticulum | 41.01 | 39.25 |
| EER88858 | Sorghum | golgi, vacuole | 41.29 | 37.03 |
| KXG27269 | Sorghum | endoplasmic reticulum | 46.91 | 35.99 |
| EES13064 | Sorghum | extracellular, plasma membrane, vacuole | 46.07 | 35.12 |
| EES11628 | Sorghum | extracellular | 44.38 | 33.55 |
| EES18460 | Sorghum | endoplasmic reticulum | 41.85 | 32.25 |
Protein Annotations
| MapMan:27.2.10 | Gene3D:3.90.70.10 | EntrezGene:8071785 | UniProt:C5XZW7 | EnsemblPlants:EES07368 | ProteinID:EES07368 |
| ProteinID:EES07368.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004197 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0005615 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005764 | GO:GO:0005773 |
| GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0008234 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0051603 | PFAM:PF00112 | PFAM:PF08246 |
| PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00639 | ScanProsite:PS00640 | PFscan:PS51257 | PANTHER:PTHR12411 |
| PANTHER:PTHR12411:SF357 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS | InterPro:Pept_his_AS | InterPro:Peptidase_C1A |
| InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | SMART:SM00645 | SMART:SM00848 | EnsemblPlantsGene:SORBI_3004G261400 | SUPFAM:SSF54001 |
| SignalP:SignalP-noTM | UniParc:UPI0001A85CA3 | RefSeq:XP_002454392.1 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr4:-:60667185..60669474
Molecular Weight (calculated)
39387.9 Da
IEP (calculated)
7.516
GRAVY (calculated)
-0.285
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPKLPVLVL FLAFAACSAS HHRDPSVVGY SQEDLALPNR LVNLFKSWSV KHRKIYVSPK EKLKRYGIFK QNLMHIAETN RKNGSYWLGL NQFADITHEE
101: FKANHLGLKQ GLSRMGAQTR TPTTFRYAAA ANLPWSVDWR YKGAVTPVKN QGKCGSCWAF SSVAAVEGIN QIVTGKLVSL SEQELMDCDT MLDHGCEGGL
201: MDFAFAYIMG SQGIHAEDDY PYLMEEGYCK EKQPYANVVT ITGYEDVPEN SEISLLKALA HQPVSVGIAA GSRDFQFYKG GVFDGSCSDE LDHALTAVGY
301: GSSYGQNYIT MKNSWGKNWG EQGYVRIKMG TGKPEGVCGI YTMASYPVKN ATLWGA
101: FKANHLGLKQ GLSRMGAQTR TPTTFRYAAA ANLPWSVDWR YKGAVTPVKN QGKCGSCWAF SSVAAVEGIN QIVTGKLVSL SEQELMDCDT MLDHGCEGGL
201: MDFAFAYIMG SQGIHAEDDY PYLMEEGYCK EKQPYANVVT ITGYEDVPEN SEISLLKALA HQPVSVGIAA GSRDFQFYKG GVFDGSCSDE LDHALTAVGY
301: GSSYGQNYIT MKNSWGKNWG EQGYVRIKMG TGKPEGVCGI YTMASYPVKN ATLWGA
001: MAFSAPSLSK FSLLVAISAS ALLCCAFARD FSIVGYTPEH LTNTDKLLEL FESWMSEHSK AYKSVEEKVH RFEVFRENLM HIDQRNNEIN SYWLGLNEFA
101: DLTHEEFKGR YLGLAKPQFS RKRQPSANFR YRDITDLPKS VDWRKKGAVA PVKDQGQCGS CWAFSTVAAV EGINQITTGN LSSLSEQELI DCDTTFNSGC
201: NGGLMDYAFQ YIISTGGLHK EDDYPYLMEE GICQEQKEDV ERVTISGYED VPENDDESLV KALAHQPVSV AIEASGRDFQ FYKGGVFNGK CGTDLDHGVA
301: AVGYGSSKGS DYVIVKNSWG PRWGEKGFIR MKRNTGKPEG LCGINKMASY PTKTK
101: DLTHEEFKGR YLGLAKPQFS RKRQPSANFR YRDITDLPKS VDWRKKGAVA PVKDQGQCGS CWAFSTVAAV EGINQITTGN LSSLSEQELI DCDTTFNSGC
201: NGGLMDYAFQ YIISTGGLHK EDDYPYLMEE GICQEQKEDV ERVTISGYED VPENDDESLV KALAHQPVSV AIEASGRDFQ FYKGGVFNGK CGTDLDHGVA
301: AVGYGSSKGS DYVIVKNSWG PRWGEKGFIR MKRNTGKPEG LCGINKMASY PTKTK
Arabidopsis Description
XCP1Cysteine protease XCP1 [Source:UniProtKB/Swiss-Prot;Acc:O65493]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.