Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 5
- plasma membrane 5
- endoplasmic reticulum 7
- vacuole 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G20850.1 | CDY37530 | AT3G01340.1 | 21798944 |
| AT1G20850.1 | CDY49046 | AT3G01340.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96617 | Canola | endoplasmic reticulum | 97.85 | 97.55 |
| CDY01351 | Canola | endoplasmic reticulum | 91.72 | 85.19 |
| CDY31861 | Canola | endoplasmic reticulum | 91.72 | 84.7 |
| AT1G20850.1 | Thale cress | endoplasmic reticulum | 92.02 | 84.27 |
| KRH60879 | Soybean | endoplasmic reticulum | 72.7 | 67.91 |
| KRH60878 | Soybean | endoplasmic reticulum | 72.39 | 67.62 |
| KRH51560 | Soybean | endoplasmic reticulum | 72.39 | 67.43 |
| KRH51561 | Soybean | endoplasmic reticulum | 72.39 | 67.43 |
| Solyc04g082710.2.1 | Tomato | cytosol | 61.66 | 65.9 |
| Solyc12g094700.1.1 | Tomato | extracellular | 66.87 | 65.86 |
| VIT_18s0122g00790.t01 | Wine grape | nucleus | 67.79 | 65.77 |
| CDY31498 | Canola | cytosol | 58.9 | 64.21 |
| PGSC0003DMT400025691 | Potato | endoplasmic reticulum, extracellular | 69.94 | 64.04 |
| CDX75496 | Canola | endoplasmic reticulum | 69.33 | 63.48 |
| PGSC0003DMT400075600 | Potato | vacuole | 66.87 | 62.46 |
| TraesCS1B01G033200.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 65.95 | 61.08 |
| TraesCS1D01G026500.1 | Wheat | endoplasmic reticulum | 65.64 | 60.97 |
| TraesCS1A01G027300.1 | Wheat | endoplasmic reticulum | 65.34 | 60.68 |
| TraesCS5D01G152400.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 65.95 | 60.39 |
| GSMUA_Achr3P03740_001 | Banana | endoplasmic reticulum | 65.34 | 60.34 |
| TraesCS5B01G138300.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 65.64 | 60.11 |
| Os05t0108600-01 | Rice | extracellular | 65.95 | 60.06 |
| CDX69132 | Canola | plastid | 69.33 | 59.47 |
| Os01t0971400-01 | Rice | extracellular | 65.34 | 58.36 |
| KXG21060 | Sorghum | endoplasmic reticulum, golgi, vacuole | 65.64 | 57.68 |
| TraesCS5A01G138700.1 | Wheat | plastid | 65.95 | 57.03 |
| EES02142 | Sorghum | vacuole | 65.64 | 56.61 |
| Zm00001d011787_P001 | Maize | extracellular | 66.26 | 56.1 |
| Zm00001d035689_P001 | Maize | extracellular | 64.42 | 55.7 |
| CDY39574 | Canola | cytosol, endoplasmic reticulum, nucleus | 46.01 | 51.02 |
| Os02t0715000-01 | Rice | endoplasmic reticulum | 56.13 | 50.0 |
| EES07368 | Sorghum | extracellular | 53.99 | 49.44 |
| TraesCS6A01G279500.1 | Wheat | endoplasmic reticulum, extracellular | 54.29 | 49.17 |
| TraesCS6B01G308300.1 | Wheat | extracellular, vacuole | 53.99 | 49.03 |
| HORVU6Hr1G070320.2 | Barley | endoplasmic reticulum, extracellular | 53.99 | 48.35 |
| Zm00001d017834_P001 | Maize | extracellular | 45.09 | 47.27 |
| TraesCS6D01G259900.1 | Wheat | plastid | 54.29 | 46.83 |
| HORVU1Hr1G003940.6 | Barley | endoplasmic reticulum | 51.84 | 45.8 |
| CDY34045 | Canola | endoplasmic reticulum | 49.69 | 44.88 |
| CDX83168 | Canola | endoplasmic reticulum | 49.69 | 44.88 |
| CDY48168 | Canola | endoplasmic reticulum | 49.08 | 44.57 |
| CDY58055 | Canola | golgi, nucleus, plastid | 43.25 | 43.79 |
| CDX77621 | Canola | endoplasmic reticulum, extracellular | 44.48 | 42.27 |
| CDY39575 | Canola | endoplasmic reticulum | 47.24 | 41.85 |
| CDY50483 | Canola | endoplasmic reticulum | 44.17 | 41.62 |
| CDX87758 | Canola | endoplasmic reticulum | 43.87 | 41.33 |
| CDY25281 | Canola | extracellular | 46.93 | 41.24 |
| CDY17193 | Canola | endoplasmic reticulum | 40.18 | 41.2 |
| CDX75633 | Canola | vacuole | 47.24 | 41.18 |
| CDY25283 | Canola | vacuole | 46.93 | 41.02 |
| CDY37617 | Canola | endoplasmic reticulum, extracellular | 46.32 | 40.81 |
| CDY22445 | Canola | vacuole | 46.01 | 40.11 |
| CDX69285 | Canola | endoplasmic reticulum, vacuole | 46.01 | 40.11 |
| CDY16132 | Canola | endoplasmic reticulum, extracellular, vacuole | 46.63 | 40.11 |
| CDY44047 | Canola | vacuole | 45.4 | 38.54 |
| CDY17093 | Canola | endoplasmic reticulum | 51.53 | 36.76 |
| CDY06760 | Canola | endoplasmic reticulum | 50.92 | 36.32 |
| CDY22370 | Canola | extracellular | 50.92 | 36.09 |
| CDX71540 | Canola | extracellular | 50.92 | 36.09 |
| CDY25228 | Canola | extracellular | 50.0 | 35.43 |
| CDY50157 | Canola | endoplasmic reticulum, extracellular, vacuole | 48.77 | 35.41 |
| CDX95457 | Canola | endoplasmic reticulum, extracellular, vacuole | 48.77 | 35.41 |
| CDY17044 | Canola | endoplasmic reticulum | 49.69 | 35.29 |
| CDY46179 | Canola | endoplasmic reticulum | 48.47 | 35.11 |
| CDY63586 | Canola | endoplasmic reticulum | 49.39 | 35.08 |
| CDX93470 | Canola | plasma membrane | 47.24 | 34.76 |
| CDX94938 | Canola | extracellular, vacuole | 46.93 | 34.62 |
| CDX95451 | Canola | endoplasmic reticulum, extracellular, vacuole | 46.01 | 34.09 |
| CDY50154 | Canola | endoplasmic reticulum | 46.01 | 34.09 |
| CDY63262 | Canola | extracellular, plasma membrane, vacuole | 25.15 | 33.06 |
| CDX99227 | Canola | endoplasmic reticulum | 48.47 | 31.16 |
| CDY27951 | Canola | endoplasmic reticulum | 41.72 | 29.63 |
| CDY02431 | Canola | nucleus | 40.18 | 29.18 |
Protein Annotations
| Gene3D:3.90.70.10 | MapMan:50.3.4 | GO:A0A078H717 | UniProt:A0A078H717 | MEROPS:C01.120 | EnsemblPlants:CDY33651 |
| ProteinID:CDY33651 | ProteinID:CDY33651.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006508 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008233 | GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00055010001 |
| PFAM:PF00112 | PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00639 | ScanProsite:PS00640 | PANTHER:PTHR12411 |
| PANTHER:PTHR12411:SF357 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS | InterPro:Pept_his_AS | InterPro:Peptidase_C1A |
| InterPro:Peptidase_C1A_C | SMART:SM00645 | SUPFAM:SSF54001 | SignalP:SignalP-noTM | UniParc:UPI0004EEEE55 | SEG:seg |
Description
BnaC08g19510DBnaC08g19510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H717]
Coordinates
chrLK032319:+:228065..229456
Molecular Weight (calculated)
36168.4 Da
IEP (calculated)
4.793
GRAVY (calculated)
-0.429
Length
326 amino acids
Sequence
(BLAST)
(BLAST)
001: MALSSPTRIL CFALALSAAS ISLCFAASND FSIVGYSPED LESHDKLIEL FENWISNFEK AYETVEEKLR SHEEFKNKYL GLKTDIARRQ EERSYQEFVY
101: KDVDVEAFPK SVDWRKKGAV SYVKNQGSCG SCWAFSTVAA VEGINKIVTG NLTTLSEQEL IDCDTTYNNG CNGGLMDYAF EYIVKNGGLR KEEDYPYSME
201: EGTCETQKDE SEMVTISGHQ DVPINDEKSL LKALAHQPLS VAIDASGREF QFYSGGVFDG RCGVDLDHGV AAVGYGSSKG SDYIIVKNSW GPTWGEKGYI
301: RMKRNTGKPE GLCGINKMAS FPTKTK
101: KDVDVEAFPK SVDWRKKGAV SYVKNQGSCG SCWAFSTVAA VEGINKIVTG NLTTLSEQEL IDCDTTYNNG CNGGLMDYAF EYIVKNGGLR KEEDYPYSME
201: EGTCETQKDE SEMVTISGHQ DVPINDEKSL LKALAHQPLS VAIDASGREF QFYSGGVFDG RCGVDLDHGV AAVGYGSSKG SDYIIVKNSW GPTWGEKGYI
301: RMKRNTGKPE GLCGINKMAS FPTKTK
001: MALSSPSRIL CFALALSAAS LSLSFASSHD YSIVGYSPED LESHDKLIEL FENWISNFEK AYETVEEKFL RFEVFKDNLK HIDETNKKGK SYWLGLNEFA
101: DLSHEEFKKM YLGLKTDIVR RDEERSYAEF AYRDVEAVPK SVDWRKKGAV AEVKNQGSCG SCWAFSTVAA VEGINKIVTG NLTTLSEQEL IDCDTTYNNG
201: CNGGLMDYAF EYIVKNGGLR KEEDYPYSME EGTCEMQKDE SETVTINGHQ DVPTNDEKSL LKALAHQPLS VAIDASGREF QFYSGGVFDG RCGVDLDHGV
301: AAVGYGSSKG SDYIIVKNSW GPKWGEKGYI RLKRNTGKPE GLCGINKMAS FPTKTK
101: DLSHEEFKKM YLGLKTDIVR RDEERSYAEF AYRDVEAVPK SVDWRKKGAV AEVKNQGSCG SCWAFSTVAA VEGINKIVTG NLTTLSEQEL IDCDTTYNNG
201: CNGGLMDYAF EYIVKNGGLR KEEDYPYSME EGTCEMQKDE SETVTINGHQ DVPTNDEKSL LKALAHQPLS VAIDASGREF QFYSGGVFDG RCGVDLDHGV
301: AAVGYGSSKG SDYIIVKNSW GPKWGEKGYI RLKRNTGKPE GLCGINKMAS FPTKTK
Arabidopsis Description
XCP2Cysteine protease XCP2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM66]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.