Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
16602704
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d008932_P001 | |
| Zm00001d039365_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G20850.1 | Zm00001d008932_P001 | AT3G01340.1 | 21798944 |
| AT1G20850.1 | Zm00001d039365_P001 | AT3G01340.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES02142 | Sorghum | vacuole | 85.19 | 86.77 |
| Os01t0971400-01 | Rice | extracellular | 72.21 | 76.16 |
| GSMUA_Achr2P04950_001 | Banana | endoplasmic reticulum, golgi | 65.97 | 72.78 |
| VIT_18s0122g00790.t01 | Wine grape | nucleus | 61.82 | 70.83 |
| Solyc04g082710.2.1 | Tomato | cytosol | 55.84 | 70.49 |
| KRH60878 | Soybean | endoplasmic reticulum | 63.64 | 70.2 |
| KRH60879 | Soybean | endoplasmic reticulum | 63.38 | 69.91 |
| KRH51560 | Soybean | endoplasmic reticulum | 63.38 | 69.71 |
| Solyc12g094700.1.1 | Tomato | extracellular | 59.74 | 69.49 |
| VIT_03s0038g04000.t01 | Wine grape | vacuole | 63.38 | 69.32 |
| KRH51561 | Soybean | endoplasmic reticulum | 62.6 | 68.86 |
| CDY01351 | Canola | endoplasmic reticulum | 62.34 | 68.38 |
| GSMUA_Achr3P03740_001 | Banana | endoplasmic reticulum | 62.6 | 68.27 |
| Bra016447.1-P | Field mustard | endoplasmic reticulum, golgi, vacuole | 63.38 | 68.16 |
| CDY31861 | Canola | endoplasmic reticulum | 62.34 | 67.99 |
| Bra012252.1-P | Field mustard | endoplasmic reticulum | 62.08 | 67.9 |
| Zm00001d035689_P001 | Maize | extracellular | 65.45 | 66.84 |
| CDX75496 | Canola | endoplasmic reticulum | 61.56 | 66.57 |
| Bra011608.1-P | Field mustard | endoplasmic reticulum | 61.3 | 66.29 |
| AT1G20850.1 | Thale cress | endoplasmic reticulum | 61.3 | 66.29 |
| CDY33651 | Canola | endoplasmic reticulum | 56.1 | 66.26 |
| PGSC0003DMT400075600 | Potato | vacuole | 60.0 | 66.19 |
| CDX96617 | Canola | endoplasmic reticulum | 56.1 | 66.06 |
| AT4G35350.1 | Thale cress | endoplasmic reticulum | 60.26 | 65.35 |
| PGSC0003DMT400025691 | Potato | endoplasmic reticulum, extracellular | 60.26 | 65.17 |
| CDX69132 | Canola | plastid | 61.56 | 62.37 |
| GSMUA_Achr3P11680_001 | Banana | endoplasmic reticulum, vacuole | 61.82 | 60.87 |
| CDY31498 | Canola | cytosol | 44.42 | 57.19 |
| Zm00001d017834_P001 | Maize | extracellular | 44.68 | 55.31 |
| Zm00001d037301_P001 | Maize | mitochondrion | 29.87 | 54.25 |
| Zm00001d004364_P001 | Maize | nucleus | 40.78 | 51.14 |
| Zm00001d042446_P001 | Maize | extracellular | 47.79 | 50.0 |
| Zm00001d004355_P001 | Maize | extracellular | 43.38 | 48.69 |
| Zm00001d008796_P001 | Maize | extracellular | 43.12 | 48.4 |
| Zm00001d007464_P001 | Maize | endoplasmic reticulum | 48.05 | 48.18 |
| Zm00001d031971_P002 | Maize | endoplasmic reticulum | 43.12 | 47.98 |
| Zm00001d045713_P001 | Maize | extracellular | 42.08 | 47.65 |
| Zm00001d013261_P001 | Maize | extracellular | 42.08 | 47.51 |
| Zm00001d037303_P001 | Maize | extracellular | 41.56 | 47.06 |
| Zm00001d045711_P001 | Maize | extracellular | 41.56 | 47.06 |
| Zm00001d045709_P001 | Maize | extracellular | 38.18 | 46.82 |
| Zm00001d012120_P001 | Maize | endoplasmic reticulum | 45.97 | 46.7 |
| Zm00001d025038_P001 | Maize | endoplasmic reticulum, extracellular | 42.34 | 46.31 |
| Zm00001d004371_P001 | Maize | extracellular | 41.56 | 46.11 |
| Zm00001d045708_P001 | Maize | extracellular | 38.96 | 45.59 |
| Zm00001d002065_P006 | Maize | plasma membrane | 49.87 | 41.03 |
| Zm00001d001900_P002 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 48.83 | 40.43 |
| Zm00001d026577_P001 | Maize | extracellular, golgi, plasma membrane | 48.83 | 40.0 |
| Zm00001d036542_P001 | Maize | endoplasmic reticulum, golgi | 41.82 | 39.66 |
| Zm00001d026458_P002 | Maize | endoplasmic reticulum | 48.57 | 38.96 |
| Zm00001d038650_P001 | Maize | extracellular | 43.12 | 36.09 |
| Zm00001d036541_P002 | Maize | extracellular, plasma membrane | 41.82 | 33.4 |
Protein Annotations
| EntrezGene:100283748 | Gene3D:3.90.70.10 | MapMan:50.3.4 | ProteinID:AQK98019.1 | UniProt:B6TLC8 | EMBL:BT062478 |
| EMBL:EU965793 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008233 | GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 | PFAM:PF00112 | PFAM:PF08246 |
| PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00639 | ScanProsite:PS00640 | PFscan:PS51257 | PANTHER:PTHR12411 |
| PANTHER:PTHR12411:SF357 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS | InterPro:Pept_his_AS | InterPro:Peptidase_C1A |
| InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | SMART:SM00645 | SMART:SM00848 | SUPFAM:SSF54001 | TMHMM:TMhelix |
| UniParc:UPI000182D357 | EnsemblPlantsGene:Zm00001d011787 | EnsemblPlants:Zm00001d011787_P001 | EnsemblPlants:Zm00001d011787_T001 | SEG:seg | : |
Description
Cysteine protease XCP1
Coordinates
chr8:-:161553753..161554910
Molecular Weight (calculated)
41598.2 Da
IEP (calculated)
4.760
GRAVY (calculated)
-0.420
Length
385 amino acids
Sequence
(BLAST)
(BLAST)
001: MHAKMTKPAA IVVAAIAVLS VSLLAGSSCL ALARPSGDFS IVGYSEEDLS SHESLAELFE RWLSRHRRAY ASLEEKLRRF QVFKDNLHHI DETNRKVSSY
101: WLGLNEFADL THDEFKATYL GLRSSVGDGG SGIDDDDEPE EEEGYEGVDG ASLPKSVDWR SKGAVTGVKN QGQCGSCWAF STVAAVEGIN QIVTGNLTAL
201: SEQELIDCDT DGNNGCNGGL MDYAFSYIAH NGGLHTEEAY PYLMEEGTCQ RSSSSEKKWP GSSEDANDDA AVVTISGYED VPRNNEQALL KALAQQPVSV
301: AIEASGRNFQ FYSGGVFDGP CGTQLDHGVA AVGYGTAAKG HDYIIVKNSW GPSWGEKGYI RMRRGTGKRQ GLCGINKMAS YPTKN
101: WLGLNEFADL THDEFKATYL GLRSSVGDGG SGIDDDDEPE EEEGYEGVDG ASLPKSVDWR SKGAVTGVKN QGQCGSCWAF STVAAVEGIN QIVTGNLTAL
201: SEQELIDCDT DGNNGCNGGL MDYAFSYIAH NGGLHTEEAY PYLMEEGTCQ RSSSSEKKWP GSSEDANDDA AVVTISGYED VPRNNEQALL KALAQQPVSV
301: AIEASGRNFQ FYSGGVFDGP CGTQLDHGVA AVGYGTAAKG HDYIIVKNSW GPSWGEKGYI RMRRGTGKRQ GLCGINKMAS YPTKN
001: MALSSPSRIL CFALALSAAS LSLSFASSHD YSIVGYSPED LESHDKLIEL FENWISNFEK AYETVEEKFL RFEVFKDNLK HIDETNKKGK SYWLGLNEFA
101: DLSHEEFKKM YLGLKTDIVR RDEERSYAEF AYRDVEAVPK SVDWRKKGAV AEVKNQGSCG SCWAFSTVAA VEGINKIVTG NLTTLSEQEL IDCDTTYNNG
201: CNGGLMDYAF EYIVKNGGLR KEEDYPYSME EGTCEMQKDE SETVTINGHQ DVPTNDEKSL LKALAHQPLS VAIDASGREF QFYSGGVFDG RCGVDLDHGV
301: AAVGYGSSKG SDYIIVKNSW GPKWGEKGYI RLKRNTGKPE GLCGINKMAS FPTKTK
101: DLSHEEFKKM YLGLKTDIVR RDEERSYAEF AYRDVEAVPK SVDWRKKGAV AEVKNQGSCG SCWAFSTVAA VEGINKIVTG NLTTLSEQEL IDCDTTYNNG
201: CNGGLMDYAF EYIVKNGGLR KEEDYPYSME EGTCEMQKDE SETVTINGHQ DVPTNDEKSL LKALAHQPLS VAIDASGREF QFYSGGVFDG RCGVDLDHGV
301: AAVGYGSSKG SDYIIVKNSW GPKWGEKGYI RLKRNTGKPE GLCGINKMAS FPTKTK
Arabidopsis Description
XCP2Cysteine protease XCP2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM66]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.