Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 7
- vacuole 5
- plasma membrane 5
- golgi 5
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G20850.1 | CDY37530 | AT3G01340.1 | 21798944 |
| AT1G20850.1 | CDY49046 | AT3G01340.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY01351 | Canola | endoplasmic reticulum | 97.73 | 98.29 |
| Bra012252.1-P | Field mustard | endoplasmic reticulum | 97.73 | 98.01 |
| CDX96617 | Canola | endoplasmic reticulum | 85.84 | 92.66 |
| AT1G20850.1 | Thale cress | endoplasmic reticulum | 92.63 | 91.85 |
| CDY33651 | Canola | endoplasmic reticulum | 84.7 | 91.72 |
| KRH60879 | Soybean | endoplasmic reticulum | 73.65 | 74.5 |
| Solyc04g082710.2.1 | Tomato | cytosol | 64.31 | 74.43 |
| KRH51560 | Soybean | endoplasmic reticulum | 73.65 | 74.29 |
| VIT_18s0122g00790.t01 | Wine grape | nucleus | 70.54 | 74.11 |
| CDY31498 | Canola | cytosol | 62.61 | 73.91 |
| KRH51561 | Soybean | endoplasmic reticulum | 73.09 | 73.71 |
| KRH60878 | Soybean | endoplasmic reticulum | 72.8 | 73.64 |
| Solyc12g094700.1.1 | Tomato | extracellular | 67.71 | 72.21 |
| PGSC0003DMT400025691 | Potato | endoplasmic reticulum, extracellular | 71.1 | 70.51 |
| PGSC0003DMT400075600 | Potato | vacuole | 69.12 | 69.91 |
| CDX75496 | Canola | endoplasmic reticulum | 69.69 | 69.1 |
| TraesCS1B01G033200.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 67.71 | 67.9 |
| TraesCS1A01G027300.1 | Wheat | endoplasmic reticulum | 67.42 | 67.81 |
| TraesCS1D01G026500.1 | Wheat | endoplasmic reticulum | 67.42 | 67.81 |
| GSMUA_Achr3P03740_001 | Banana | endoplasmic reticulum | 67.14 | 67.14 |
| Os05t0108600-01 | Rice | extracellular | 67.99 | 67.04 |
| TraesCS5D01G152400.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 66.86 | 66.29 |
| TraesCS5B01G138300.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 66.57 | 66.01 |
| Os01t0971400-01 | Rice | extracellular | 67.14 | 64.93 |
| CDX69132 | Canola | plastid | 69.41 | 64.47 |
| KXG21060 | Sorghum | endoplasmic reticulum, golgi, vacuole | 66.86 | 63.61 |
| EES02142 | Sorghum | vacuole | 67.99 | 63.49 |
| TraesCS5A01G138700.1 | Wheat | plastid | 66.86 | 62.6 |
| Zm00001d011787_P001 | Maize | extracellular | 67.99 | 62.34 |
| Zm00001d035689_P001 | Maize | extracellular | 65.44 | 61.27 |
| Os02t0715000-01 | Rice | endoplasmic reticulum | 57.79 | 55.74 |
| CDY39574 | Canola | cytosol, endoplasmic reticulum, nucleus | 45.89 | 55.1 |
| TraesCS6B01G308300.1 | Wheat | extracellular, vacuole | 55.81 | 54.87 |
| TraesCS6A01G279500.1 | Wheat | endoplasmic reticulum, extracellular | 55.81 | 54.72 |
| EES07368 | Sorghum | extracellular | 54.96 | 54.49 |
| HORVU6Hr1G070320.2 | Barley | endoplasmic reticulum, extracellular | 55.52 | 53.85 |
| Zm00001d017834_P001 | Maize | extracellular | 47.03 | 53.38 |
| HORVU1Hr1G003940.6 | Barley | endoplasmic reticulum | 54.96 | 52.57 |
| TraesCS6D01G259900.1 | Wheat | plastid | 55.24 | 51.59 |
| CDY34045 | Canola | endoplasmic reticulum | 51.84 | 50.69 |
| CDX83168 | Canola | endoplasmic reticulum | 51.56 | 50.42 |
| CDY48168 | Canola | endoplasmic reticulum | 50.42 | 49.58 |
| CDY58055 | Canola | golgi, nucleus, plastid | 44.19 | 48.45 |
| CDY17193 | Canola | endoplasmic reticulum | 43.34 | 48.11 |
| CDX75633 | Canola | vacuole | 49.58 | 46.79 |
| CDX77621 | Canola | endoplasmic reticulum, extracellular | 45.33 | 46.65 |
| CDY22445 | Canola | vacuole | 49.01 | 46.26 |
| CDY39575 | Canola | endoplasmic reticulum | 48.16 | 46.2 |
| CDX69285 | Canola | endoplasmic reticulum, vacuole | 48.44 | 45.72 |
| CDY50483 | Canola | endoplasmic reticulum | 44.76 | 45.66 |
| CDX87758 | Canola | endoplasmic reticulum | 44.48 | 45.38 |
| CDY25283 | Canola | vacuole | 47.59 | 45.04 |
| CDY25281 | Canola | extracellular | 47.03 | 44.74 |
| CDY44047 | Canola | vacuole | 48.44 | 44.53 |
| CDY37617 | Canola | endoplasmic reticulum, extracellular | 46.46 | 44.32 |
| CDY16132 | Canola | endoplasmic reticulum, extracellular, vacuole | 46.74 | 43.54 |
| CDY63262 | Canola | extracellular, plasma membrane, vacuole | 29.75 | 42.34 |
| CDY17093 | Canola | endoplasmic reticulum | 53.26 | 41.14 |
| CDY22370 | Canola | extracellular | 53.54 | 41.09 |
| CDX71540 | Canola | extracellular | 53.54 | 41.09 |
| CDY06760 | Canola | endoplasmic reticulum | 52.69 | 40.7 |
| CDY25228 | Canola | extracellular | 52.97 | 40.65 |
| CDY63586 | Canola | endoplasmic reticulum | 51.84 | 39.87 |
| CDY17044 | Canola | endoplasmic reticulum | 51.84 | 39.87 |
| CDY46179 | Canola | endoplasmic reticulum | 50.71 | 39.78 |
| CDX95457 | Canola | endoplasmic reticulum, extracellular, vacuole | 50.42 | 39.64 |
| CDY50157 | Canola | endoplasmic reticulum, extracellular, vacuole | 50.42 | 39.64 |
| CDY50154 | Canola | endoplasmic reticulum | 48.73 | 39.09 |
| CDX95451 | Canola | endoplasmic reticulum, extracellular, vacuole | 47.88 | 38.41 |
| CDX93470 | Canola | plasma membrane | 48.16 | 38.37 |
| CDX94938 | Canola | extracellular, vacuole | 47.88 | 38.24 |
| CDX99227 | Canola | endoplasmic reticulum | 50.71 | 35.31 |
| CDY02431 | Canola | nucleus | 41.36 | 32.52 |
| CDY27951 | Canola | endoplasmic reticulum | 40.79 | 31.37 |
Protein Annotations
| MapMan:19.4.1.1 | MapMan:27.2.10 | Gene3D:3.90.70.10 | GO:A0A078H247 | UniProt:A0A078H247 | MEROPS:C01.120 |
| EnsemblPlants:CDY31861 | ProteinID:CDY31861 | ProteinID:CDY31861.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006508 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 |
| EnsemblPlantsGene:GSBRNA2T00050585001 | PFAM:PF00112 | PFAM:PF08246 | PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00639 |
| ScanProsite:PS00640 | PANTHER:PTHR12411 | PANTHER:PTHR12411:SF357 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS |
| InterPro:Pept_his_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | SMART:SM00645 | SMART:SM00848 |
| SUPFAM:SSF54001 | SignalP:SignalP-noTM | UniParc:UPI0004EEE46C | SEG:seg | : | : |
Description
BnaC07g15110DBnaC07g15110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H247]
Coordinates
chrLK032281:-:129251..130703
Molecular Weight (calculated)
39611.4 Da
IEP (calculated)
5.001
GRAVY (calculated)
-0.526
Length
353 amino acids
Sequence
(BLAST)
(BLAST)
001: MATRILCLLL ALTAASLSFS FSAPHDFSIV GYAPEDLESH DKLIELFENW LSNFEKAYET VEEKFRRFEV FKDNLKHIDE TNKKAKSYWL GLNEFADLSH
101: EEFKNKYLGL KTDIVRRDDD ERSYQEFAYK DVEALPKSVD WRKKGAVSYV KNQGSCGSCW AFSTVAAVEG INKIVTGNLT TLSEQELIDC DTTYNNGCNG
201: GLMDYAFDYI VKNGGLRKEE DYPYSMEEGT CETQKDESEM VTINGHQDVP TNDEKSLLKA LAHQPLSVAI DASGREFQFY SGGVFDGRCG VDLDHGVAAV
301: GYGSSKGSDY IIVKNSWGPK WGEKGYIRMK RNTGKPEGLC GINKMASFPT KTK
101: EEFKNKYLGL KTDIVRRDDD ERSYQEFAYK DVEALPKSVD WRKKGAVSYV KNQGSCGSCW AFSTVAAVEG INKIVTGNLT TLSEQELIDC DTTYNNGCNG
201: GLMDYAFDYI VKNGGLRKEE DYPYSMEEGT CETQKDESEM VTINGHQDVP TNDEKSLLKA LAHQPLSVAI DASGREFQFY SGGVFDGRCG VDLDHGVAAV
301: GYGSSKGSDY IIVKNSWGPK WGEKGYIRMK RNTGKPEGLC GINKMASFPT KTK
001: MALSSPSRIL CFALALSAAS LSLSFASSHD YSIVGYSPED LESHDKLIEL FENWISNFEK AYETVEEKFL RFEVFKDNLK HIDETNKKGK SYWLGLNEFA
101: DLSHEEFKKM YLGLKTDIVR RDEERSYAEF AYRDVEAVPK SVDWRKKGAV AEVKNQGSCG SCWAFSTVAA VEGINKIVTG NLTTLSEQEL IDCDTTYNNG
201: CNGGLMDYAF EYIVKNGGLR KEEDYPYSME EGTCEMQKDE SETVTINGHQ DVPTNDEKSL LKALAHQPLS VAIDASGREF QFYSGGVFDG RCGVDLDHGV
301: AAVGYGSSKG SDYIIVKNSW GPKWGEKGYI RLKRNTGKPE GLCGINKMAS FPTKTK
101: DLSHEEFKKM YLGLKTDIVR RDEERSYAEF AYRDVEAVPK SVDWRKKGAV AEVKNQGSCG SCWAFSTVAA VEGINKIVTG NLTTLSEQEL IDCDTTYNNG
201: CNGGLMDYAF EYIVKNGGLR KEEDYPYSME EGTCEMQKDE SETVTINGHQ DVPTNDEKSL LKALAHQPLS VAIDASGREF QFYSGGVFDG RCGVDLDHGV
301: AAVGYGSSKG SDYIIVKNSW GPKWGEKGYI RLKRNTGKPE GLCGINKMAS FPTKTK
Arabidopsis Description
XCP2Cysteine protease XCP2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM66]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.