Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93470 | Canola | plasma membrane | 96.83 | 96.61 |
| AT1G09850.1 | Thale cress | endoplasmic reticulum | 88.69 | 89.7 |
| KRH61098 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 61.31 | 61.73 |
| GSMUA_Achr4P17710_001 | Banana | endoplasmic reticulum, extracellular | 61.31 | 61.59 |
| PGSC0003DMT400009624 | Potato | extracellular | 61.09 | 61.5 |
| Zm00001d038650_P001 | Maize | extracellular | 60.63 | 58.26 |
| Os05t0508300-01 | Rice | plasma membrane | 59.28 | 58.22 |
| VIT_18s0001g13270.t01 | Wine grape | extracellular | 57.24 | 58.03 |
| TraesCS1D01G327000.1 | Wheat | extracellular | 59.05 | 57.49 |
| EES18460 | Sorghum | endoplasmic reticulum | 59.73 | 57.14 |
| TraesCS1A01G325400.1 | Wheat | extracellular | 58.37 | 56.95 |
| TraesCS1B01G338500.1 | Wheat | endoplasmic reticulum, unclear | 58.6 | 56.06 |
| HORVU1Hr1G075530.3 | Barley | plastid | 57.69 | 50.3 |
| CDY39574 | Canola | cytosol, endoplasmic reticulum, nucleus | 33.26 | 50.0 |
| CDY31861 | Canola | endoplasmic reticulum | 38.24 | 47.88 |
| CDY01351 | Canola | endoplasmic reticulum | 38.01 | 47.86 |
| CDX75496 | Canola | endoplasmic reticulum | 38.24 | 47.47 |
| CDX96617 | Canola | endoplasmic reticulum | 35.07 | 47.4 |
| CDY33651 | Canola | endoplasmic reticulum | 34.62 | 46.93 |
| CDX75633 | Canola | vacuole | 39.59 | 46.79 |
| CDY06760 | Canola | endoplasmic reticulum | 48.19 | 46.61 |
| CDY22370 | Canola | extracellular | 48.42 | 46.52 |
| CDX71540 | Canola | extracellular | 48.42 | 46.52 |
| CDY63586 | Canola | endoplasmic reticulum | 48.19 | 46.41 |
| CDY17044 | Canola | endoplasmic reticulum | 48.19 | 46.41 |
| CDY17093 | Canola | endoplasmic reticulum | 47.96 | 46.39 |
| CDY22445 | Canola | vacuole | 39.14 | 46.26 |
| CDX69285 | Canola | endoplasmic reticulum, vacuole | 39.14 | 46.26 |
| CDY17193 | Canola | endoplasmic reticulum | 33.26 | 46.23 |
| CDX95457 | Canola | endoplasmic reticulum, extracellular, vacuole | 46.83 | 46.1 |
| CDY46179 | Canola | endoplasmic reticulum | 46.83 | 46.0 |
| CDY50157 | Canola | endoplasmic reticulum, extracellular, vacuole | 46.38 | 45.66 |
| CDY25228 | Canola | extracellular | 47.29 | 45.43 |
| CDX69132 | Canola | plastid | 38.69 | 45.0 |
| CDY48168 | Canola | endoplasmic reticulum | 35.97 | 44.29 |
| CDY44047 | Canola | vacuole | 38.46 | 44.27 |
| CDY58055 | Canola | golgi, nucleus, plastid | 32.13 | 44.1 |
| CDY50154 | Canola | endoplasmic reticulum | 43.89 | 44.09 |
| CDX95451 | Canola | endoplasmic reticulum, extracellular, vacuole | 43.67 | 43.86 |
| CDX77621 | Canola | endoplasmic reticulum, extracellular | 33.26 | 42.86 |
| CDY34045 | Canola | endoplasmic reticulum | 34.62 | 42.38 |
| CDY50483 | Canola | endoplasmic reticulum | 32.81 | 41.91 |
| CDY39575 | Canola | endoplasmic reticulum | 34.84 | 41.85 |
| CDX83168 | Canola | endoplasmic reticulum | 34.16 | 41.83 |
| CDY37617 | Canola | endoplasmic reticulum, extracellular | 34.62 | 41.35 |
| CDX87758 | Canola | endoplasmic reticulum | 32.35 | 41.33 |
| CDY25281 | Canola | extracellular | 34.62 | 41.24 |
| CDY25283 | Canola | vacuole | 34.62 | 41.02 |
| CDX99227 | Canola | endoplasmic reticulum | 46.38 | 40.43 |
| CDY63262 | Canola | extracellular, plasma membrane, vacuole | 22.17 | 39.52 |
| CDY16132 | Canola | endoplasmic reticulum, extracellular, vacuole | 33.71 | 39.31 |
| CDY02431 | Canola | nucleus | 39.59 | 38.98 |
| CDY27951 | Canola | endoplasmic reticulum | 39.59 | 38.13 |
| CDY31498 | Canola | cytosol | 25.11 | 37.12 |
| Solyc04g080880.2.1 | Tomato | extracellular | 61.54 | 32.19 |
Protein Annotations
| Gene3D:3.10.20.500 | Gene3D:3.90.70.10 | MapMan:50.3.4 | GO:A0A078E6B1 | MEROPS:C01.A13 | EnsemblPlants:CDX94938 |
| ProteinID:CDX94938 | ProteinID:CDX94938.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006508 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00100419001 | InterPro:Granulin |
| InterPro:Granulin_sf | InterPro:IPR037277 | PFAM:PF00112 | PFAM:PF00396 | PFAM:PF08246 | PRINTS:PR00705 |
| ScanProsite:PS00139 | ScanProsite:PS00639 | ScanProsite:PS00640 | PANTHER:PTHR12411 | PANTHER:PTHR12411:SF387 | InterPro:Papain_like_cys_pep_sf |
| InterPro:Pept_asp_AS | InterPro:Pept_cys_AS | InterPro:Pept_his_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 |
| SMART:SM00277 | SMART:SM00645 | SMART:SM00848 | SUPFAM:SSF54001 | SUPFAM:SSF57277 | SignalP:SignalP-noTM |
| UniParc:UPI0004EB173F | SEG:seg | : | : | : | : |
Description
BnaC05g07330D
Coordinates
chrLK031886:-:273840..276513
Molecular Weight (calculated)
48559.1 Da
IEP (calculated)
6.697
GRAVY (calculated)
-0.337
Length
442 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPSSSSSFV SITFFSLLLV SSLSFPSSSS DDISELFDAW CQRHGKTYAS EEERQHRIEI FRDNHDFVTR HNGIANSTYS LSLNAFADLT HHEFKASRLG
101: LSASSAPLLV AKGESVENVG GKVPDSVDWR KKGAVTNVKD QGSCGACWSF SATGAMEGIN QIVTGDLISL SEQELIDCDK SYNDGCNGGL MDYAFQFVIK
201: NHGIDTEKDY PYQERDGTCK KDKLKRKVVT IDSYAGVKSN DEKALLEAVA AQPVSVGICG SERAFQLYSK GIFSGPCSTS LDHAVLIVGY GSQNGVDYWI
301: VKNSWGKSWG MDGFMHMQRN TGNSEGVCGI NMLASYPIKT HPNPPPPSPS GPTKCNLFTY CAADETCCCA RNLFGLCFSW KCCELESAVC CKDGRHCCPR
401: DYPVCDTTRS LCLKKTGNFT EIKPFWKKNA SNKLGKFEEW VM
101: LSASSAPLLV AKGESVENVG GKVPDSVDWR KKGAVTNVKD QGSCGACWSF SATGAMEGIN QIVTGDLISL SEQELIDCDK SYNDGCNGGL MDYAFQFVIK
201: NHGIDTEKDY PYQERDGTCK KDKLKRKVVT IDSYAGVKSN DEKALLEAVA AQPVSVGICG SERAFQLYSK GIFSGPCSTS LDHAVLIVGY GSQNGVDYWI
301: VKNSWGKSWG MDGFMHMQRN TGNSEGVCGI NMLASYPIKT HPNPPPPSPS GPTKCNLFTY CAADETCCCA RNLFGLCFSW KCCELESAVC CKDGRHCCPR
401: DYPVCDTTRS LCLKKTGNFT EIKPFWKKNA SNKLGKFEEW VM
001: MSMSSSSFIS LTFFFLLLVS SSSSSDDISE LFDDWCQKHG KTYGSEEERQ QRIQIFKDNH DFVTQHNLIT NATYSLSLNA FADLTHHEFK ASRLGLSVSA
101: PSVIMASKGQ SLGGSVKVPD SVDWRKKGAV TNVKDQGSCG ACWSFSATGA MEGINQIVTG DLISLSEQEL IDCDKSYNAG CNGGLMDYAF EFVIKNHGID
201: TEKDYPYQER DGTCKKDKLK QKVVTIDSYA GVKSNDEKAL MEAVAAQPVS VGICGSERAF QLYSSGIFSG PCSTSLDHAV LIVGYGSQNG VDYWIVKNSW
301: GKSWGMDGFM HMQRNTENSD GVCGINMLAS YPIKTHPNPP PPSPPGPTKC NLFTYCSSGE TCCCARELFG LCFSWKCCEI ESAVCCKDGR HCCPHDYPVC
401: DTTRSLCLKK TGNFTAIKPF WKKNSSKQLG RFEEWVM
101: PSVIMASKGQ SLGGSVKVPD SVDWRKKGAV TNVKDQGSCG ACWSFSATGA MEGINQIVTG DLISLSEQEL IDCDKSYNAG CNGGLMDYAF EFVIKNHGID
201: TEKDYPYQER DGTCKKDKLK QKVVTIDSYA GVKSNDEKAL MEAVAAQPVS VGICGSERAF QLYSSGIFSG PCSTSLDHAV LIVGYGSQNG VDYWIVKNSW
301: GKSWGMDGFM HMQRNTENSD GVCGINMLAS YPIKTHPNPP PPSPPGPTKC NLFTYCSSGE TCCCARELFG LCFSWKCCEI ESAVCCKDGR HCCPHDYPVC
401: DTTRSLCLKK TGNFTAIKPF WKKNSSKQLG RFEEWVM
Arabidopsis Description
XBCP3At1g09850 [Source:UniProtKB/TrEMBL;Acc:Q0WVJ5]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.