Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013705.1-P | Field mustard | extracellular | 91.53 | 69.21 |
| AT4G23520.1 | Thale cress | endoplasmic reticulum | 68.55 | 47.75 |
| CDY17193 | Canola | endoplasmic reticulum | 52.02 | 40.57 |
| CDY25283 | Canola | vacuole | 50.0 | 33.24 |
| CDY37617 | Canola | endoplasmic reticulum, extracellular | 48.39 | 32.43 |
| CDY25281 | Canola | extracellular | 48.39 | 32.34 |
| CDY16132 | Canola | endoplasmic reticulum, extracellular, vacuole | 48.39 | 31.66 |
| CDX75633 | Canola | vacuole | 47.58 | 31.55 |
| CDY22445 | Canola | vacuole | 47.18 | 31.28 |
| CDX69285 | Canola | endoplasmic reticulum, vacuole | 46.37 | 30.75 |
| CDY44047 | Canola | vacuole | 46.77 | 30.21 |
| CDY01351 | Canola | endoplasmic reticulum | 42.34 | 29.91 |
| CDY31861 | Canola | endoplasmic reticulum | 42.34 | 29.75 |
| CDY25228 | Canola | extracellular | 54.44 | 29.35 |
| CDY17093 | Canola | endoplasmic reticulum | 54.03 | 29.32 |
| CDY17044 | Canola | endoplasmic reticulum | 54.03 | 29.19 |
| CDX71540 | Canola | extracellular | 54.03 | 29.13 |
| CDY22370 | Canola | extracellular | 54.03 | 29.13 |
| CDY06760 | Canola | endoplasmic reticulum | 53.63 | 29.1 |
| CDX75496 | Canola | endoplasmic reticulum | 41.53 | 28.93 |
| KXG20680 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 41.53 | 28.77 |
| CDY63586 | Canola | endoplasmic reticulum | 52.82 | 28.54 |
| CDY31498 | Canola | cytosol | 33.87 | 28.09 |
| CDY58055 | Canola | golgi, nucleus, plastid | 36.29 | 27.95 |
| EER88857 | Sorghum | endoplasmic reticulum | 40.73 | 27.15 |
| CDX77621 | Canola | endoplasmic reticulum, extracellular | 37.5 | 27.11 |
| CDX69132 | Canola | plastid | 41.53 | 27.11 |
| CDY39574 | Canola | cytosol, endoplasmic reticulum, nucleus | 31.45 | 26.53 |
| EER88858 | Sorghum | golgi, vacuole | 41.94 | 26.2 |
| CDX83168 | Canola | endoplasmic reticulum | 37.9 | 26.04 |
| CDY46179 | Canola | endoplasmic reticulum | 46.77 | 25.78 |
| CDY34045 | Canola | endoplasmic reticulum | 37.5 | 25.76 |
| CDY48168 | Canola | endoplasmic reticulum | 37.1 | 25.63 |
| CDX95457 | Canola | endoplasmic reticulum, extracellular, vacuole | 46.37 | 25.61 |
| CDY50157 | Canola | endoplasmic reticulum, extracellular, vacuole | 45.97 | 25.39 |
| CDX96617 | Canola | endoplasmic reticulum | 33.47 | 25.38 |
| CDY33651 | Canola | endoplasmic reticulum | 33.06 | 25.15 |
| CDY50154 | Canola | endoplasmic reticulum | 44.35 | 25.0 |
| CDX95451 | Canola | endoplasmic reticulum, extracellular, vacuole | 43.95 | 24.77 |
| CDX87758 | Canola | endoplasmic reticulum | 33.87 | 24.28 |
| Zm00001d036542_P001 | Maize | endoplasmic reticulum, golgi | 39.52 | 24.14 |
| CDY50483 | Canola | endoplasmic reticulum | 33.47 | 23.99 |
| CDY39575 | Canola | endoplasmic reticulum | 35.08 | 23.64 |
| CDY27951 | Canola | endoplasmic reticulum | 43.55 | 23.53 |
| CDX99227 | Canola | endoplasmic reticulum | 46.77 | 22.88 |
| CDX94938 | Canola | extracellular, vacuole | 39.52 | 22.17 |
| CDX93470 | Canola | plasma membrane | 39.11 | 21.9 |
| Zm00001d036541_P002 | Maize | extracellular, plasma membrane | 41.13 | 21.16 |
| CDY02431 | Canola | nucleus | 38.31 | 21.16 |
Protein Annotations
| Gene3D:3.90.70.10 | MapMan:50.3.4 | GO:A0A078JDX3 | UniProt:A0A078JDX3 | EnsemblPlants:CDY63262 | ProteinID:CDY63262 |
| ProteinID:CDY63262.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00038081001 | PFAM:PF00112 | PFAM:PF08246 |
| PANTHER:PTHR12411 | PANTHER:PTHR12411:SF526 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 |
| SMART:SM00645 | SMART:SM00848 | SUPFAM:SSF54001 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EE25E5 |
| SEG:seg | : | : | : | : | : |
Description
BnaCnng41770DProbable cysteine protease RDL6 [Source:Projected from Arabidopsis thaliana (AT4G23520) UniProtKB/Swiss-Prot;Acc:F4JNL3]
Coordinates
chrLK034272:+:5668..6791
Molecular Weight (calculated)
27807.1 Da
IEP (calculated)
7.203
GRAVY (calculated)
-0.151
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFARAACMT ILFLLIIFFL SPSSAVDIPV VSHSGRRSNV EVGFIFQTWL STHGKSYVNA LGERQRRFEI FKDNLRFVDQ HNAKNLSYQL GLTRFADLTV
101: EEYRDLSSGR HDNEPIQRAR RVSHRYVSLP GDQLPESVDW RKEGAVTAVK DQGSCSSCWA FSSVAAVEGI NKIVTGELIS LSEQQLVDCN TGNYGCDGRG
201: YMDISFKFLI NNNIGLVSQI DYPYKAVQGN CNHNEVHLLV VPLLNTHI
101: EEYRDLSSGR HDNEPIQRAR RVSHRYVSLP GDQLPESVDW RKEGAVTAVK DQGSCSSCWA FSSVAAVEGI NKIVTGELIS LSEQQLVDCN TGNYGCDGRG
201: YMDISFKFLI NNNIGLVSQI DYPYKAVQGN CNHNEVHLLV VPLLNTHI
001: MGFLKPTMAI LFLAMVAVSS AVDMSIISYD EKHGVSTTGG RSEAEVMSIY EAWLVKHGKA QSQNSLVEKD RRFEIFKDNL RFVDEHNEKN LSYRLGLTRF
101: ADLTNDEYRS KYLGAKMEKK GERRTSLRYE ARVGDELPES IDWRKKGAVA EVKDQGGCGS CWAFSTIGAV EGINQIVTGD LITLSEQELV DCDTSYNEGC
201: NGGLMDYAFE FIIKNGGIDT DKDYPYKGVD GTCDQIRKNA KVVTIDSYED VPTYSEESLK KAVAHQPISI AIEAGGRAFQ LYDSGIFDGS CGTQLDHGVV
301: AVGYGTENGK DYWIVRNSWG KSWGESGYLR MARNIASSSG KCGIAIEPSY PIKNGENPPN PGPSPPSPIK PPTQCDSYYT CPESNTCCCL FEYGKYCFAW
401: GCCPLEAATC CDDNYSCCPH EYPVCDLDQG TCLLSKNSPF SVKALKRKPA TPFWSQGRKN IA
101: ADLTNDEYRS KYLGAKMEKK GERRTSLRYE ARVGDELPES IDWRKKGAVA EVKDQGGCGS CWAFSTIGAV EGINQIVTGD LITLSEQELV DCDTSYNEGC
201: NGGLMDYAFE FIIKNGGIDT DKDYPYKGVD GTCDQIRKNA KVVTIDSYED VPTYSEESLK KAVAHQPISI AIEAGGRAFQ LYDSGIFDGS CGTQLDHGVV
301: AVGYGTENGK DYWIVRNSWG KSWGESGYLR MARNIASSSG KCGIAIEPSY PIKNGENPPN PGPSPPSPIK PPTQCDSYYT CPESNTCCCL FEYGKYCFAW
401: GCCPLEAATC CDDNYSCCPH EYPVCDLDQG TCLLSKNSPF SVKALKRKPA TPFWSQGRKN IA
Arabidopsis Description
RD21ARD21A [Source:UniProtKB/TrEMBL;Acc:A0A178WIH7]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.