Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 5
- plasma membrane 5
- endoplasmic reticulum 6
- vacuole 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY50157 | Canola | endoplasmic reticulum, extracellular, vacuole | 97.77 | 97.77 |
| CDY46179 | Canola | endoplasmic reticulum | 89.75 | 89.56 |
| CDY50154 | Canola | endoplasmic reticulum | 80.4 | 82.05 |
| CDX95451 | Canola | endoplasmic reticulum, extracellular, vacuole | 80.18 | 81.82 |
| AT3G19390.1 | Thale cress | endoplasmic reticulum | 81.29 | 80.75 |
| CDX99227 | Canola | endoplasmic reticulum | 88.64 | 78.5 |
| CDX71540 | Canola | extracellular | 61.02 | 59.57 |
| CDY22370 | Canola | extracellular | 61.02 | 59.57 |
| CDY25228 | Canola | extracellular | 59.91 | 58.48 |
| CDY06760 | Canola | endoplasmic reticulum | 58.8 | 57.77 |
| CDY17093 | Canola | endoplasmic reticulum | 58.8 | 57.77 |
| CDY63586 | Canola | endoplasmic reticulum | 58.57 | 57.3 |
| CDY17044 | Canola | endoplasmic reticulum | 58.57 | 57.3 |
| TraesCS2D01G547600.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 46.77 | 57.07 |
| CDY39574 | Canola | cytosol, endoplasmic reticulum, nucleus | 37.19 | 56.8 |
| TraesCS2A01G545700.1 | Wheat | unclear | 58.13 | 55.3 |
| Zm00001d001900_P002 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 57.24 | 55.27 |
| TraesCS2B01G576300.1 | Wheat | unclear | 57.68 | 55.22 |
| TraesCS2D01G546600.1 | Wheat | plasma membrane, vacuole | 58.35 | 55.16 |
| TraesCS7D01G265100.1 | Wheat | cytosol, nucleus, plastid | 31.63 | 55.04 |
| Zm00001d026577_P001 | Maize | extracellular, golgi, plasma membrane | 57.02 | 54.47 |
| CDY17193 | Canola | endoplasmic reticulum | 38.53 | 54.4 |
| EES13064 | Sorghum | extracellular, plasma membrane, vacuole | 56.12 | 53.96 |
| CDY22445 | Canola | vacuole | 44.54 | 53.48 |
| CDX69285 | Canola | endoplasmic reticulum, vacuole | 44.54 | 53.48 |
| CDX75633 | Canola | vacuole | 44.32 | 53.21 |
| Os04t0670200-02 | Rice | extracellular | 57.02 | 52.03 |
| CDY44047 | Canola | vacuole | 44.32 | 51.82 |
| TraesCS7B01G162200.1 | Wheat | endoplasmic reticulum | 53.01 | 51.63 |
| HORVU7Hr1G055310.1 | Barley | extracellular | 52.78 | 50.75 |
| CDY48168 | Canola | endoplasmic reticulum | 40.53 | 50.7 |
| TraesCS2B01G577300.1 | Wheat | extracellular, golgi | 52.78 | 50.53 |
| TraesCS5D01G149800.1 | Wheat | endoplasmic reticulum | 52.56 | 50.43 |
| CDY01351 | Canola | endoplasmic reticulum | 39.42 | 50.43 |
| CDY31861 | Canola | endoplasmic reticulum | 39.64 | 50.42 |
| TraesCS7A01G264200.1 | Wheat | endoplasmic reticulum | 53.23 | 50.42 |
| EES11628 | Sorghum | extracellular | 52.78 | 50.32 |
| HORVU2Hr1G121440.2 | Barley | endoplasmic reticulum | 55.9 | 50.2 |
| CDY58055 | Canola | golgi, nucleus, plastid | 35.86 | 50.0 |
| TraesCS2A01G546700.1 | Wheat | endoplasmic reticulum | 51.67 | 49.57 |
| TraesCS2D01G547800.1 | Wheat | endoplasmic reticulum, extracellular | 51.67 | 49.57 |
| TraesCS2A01G546300.1 | Wheat | endoplasmic reticulum, vacuole | 51.67 | 49.47 |
| Os04t0670500-01 | Rice | extracellular | 53.9 | 49.39 |
| TraesCS2B01G577500.1 | Wheat | endoplasmic reticulum | 51.45 | 49.36 |
| CDX96617 | Canola | endoplasmic reticulum | 35.86 | 49.24 |
| CDY33651 | Canola | endoplasmic reticulum | 35.41 | 48.77 |
| CDX75496 | Canola | endoplasmic reticulum | 38.53 | 48.6 |
| CDY27951 | Canola | endoplasmic reticulum | 49.22 | 48.15 |
| CDX83168 | Canola | endoplasmic reticulum | 38.53 | 47.92 |
| CDY34045 | Canola | endoplasmic reticulum | 38.31 | 47.65 |
| HORVU2Hr1G121150.1 | Barley | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 51.22 | 47.33 |
| CDX93470 | Canola | plasma membrane | 46.55 | 47.18 |
| CDY39575 | Canola | endoplasmic reticulum | 38.53 | 47.01 |
| CDX77621 | Canola | endoplasmic reticulum, extracellular | 35.86 | 46.94 |
| CDX94938 | Canola | extracellular, vacuole | 46.1 | 46.83 |
| CDX87758 | Canola | endoplasmic reticulum | 35.86 | 46.53 |
| CDY50483 | Canola | endoplasmic reticulum | 35.86 | 46.53 |
| CDY63262 | Canola | extracellular, plasma membrane, vacuole | 25.61 | 46.37 |
| CDY37617 | Canola | endoplasmic reticulum, extracellular | 37.86 | 45.95 |
| CDY02431 | Canola | nucleus | 45.88 | 45.88 |
| CDY25281 | Canola | extracellular | 37.86 | 45.82 |
| CDX69132 | Canola | plastid | 38.75 | 45.79 |
| CDY25283 | Canola | vacuole | 37.86 | 45.58 |
| CDY16132 | Canola | endoplasmic reticulum, extracellular, vacuole | 37.19 | 44.06 |
| CDY31498 | Canola | cytosol | 27.39 | 41.14 |
Protein Annotations
| Gene3D:3.10.20.500 | Gene3D:3.90.70.10 | MapMan:50.3.4 | GO:A0A078E2V9 | EnsemblPlants:CDX95457 | ProteinID:CDX95457 |
| ProteinID:CDX95457.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00101223001 | InterPro:Granulin | InterPro:Granulin_sf |
| InterPro:IPR037277 | PFAM:PF00112 | PFAM:PF00396 | PFAM:PF08246 | PRINTS:PR00705 | ScanProsite:PS00139 |
| ScanProsite:PS00639 | ScanProsite:PS00640 | PANTHER:PTHR12411 | PANTHER:PTHR12411:SF352 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS |
| InterPro:Pept_cys_AS | InterPro:Pept_his_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | SMART:SM00277 |
| SMART:SM00645 | SMART:SM00848 | SUPFAM:SSF54001 | SUPFAM:SSF57277 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| UniParc:UPI0004EC222C | SEG:seg | : | : | : | : |
Description
BnaC01g33490D
Coordinates
chrLK031889:-:271006..272870
Molecular Weight (calculated)
49345.3 Da
IEP (calculated)
5.365
GRAVY (calculated)
-0.351
Length
449 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTTIRFTLV ILSVLLVSSS LGGVTAKVLE QNLMERNIFE RWLVENHKNY NGLGEKDQRF QIFMDNVRFV QEHNSVPNQS YELGLTRFAD LTNEEFRAMY
101: LRKKMERTRV SVKAERYLHK VGDKLPDEVD WRAKGAVVPV KDQGSCGSCW AFSAIGAVEG INQIKTGELV SLSEQELVDC DTSYNEGCNG GLMDYAFQFI
201: IDNGGIDTEE DYPYVATDVN MCNSDKKNTR VVTIDGFEDV PENDEKSLKK ALAHQPISVA IEAGGREFQL YKSGVFTGTC GTALDHGVVA VGYGTSQEGQ
301: DYWIIRNSWG SNWGESGYVK LQRNIKDSSG KCGVAMMASY PTKSSSINPP KPPPPSPVVC DKSYTCPAKS TCCCLYEYKG KCYSWGCCPF ESATCCEDGS
401: SCCPQAYPVC DLEAGTCRMK ANSPLSVKAF TRGPATATSK ATNVLVSSS
101: LRKKMERTRV SVKAERYLHK VGDKLPDEVD WRAKGAVVPV KDQGSCGSCW AFSAIGAVEG INQIKTGELV SLSEQELVDC DTSYNEGCNG GLMDYAFQFI
201: IDNGGIDTEE DYPYVATDVN MCNSDKKNTR VVTIDGFEDV PENDEKSLKK ALAHQPISVA IEAGGREFQL YKSGVFTGTC GTALDHGVVA VGYGTSQEGQ
301: DYWIIRNSWG SNWGESGYVK LQRNIKDSSG KCGVAMMASY PTKSSSINPP KPPPPSPVVC DKSYTCPAKS TCCCLYEYKG KCYSWGCCPF ESATCCEDGS
401: SCCPQAYPVC DLEAGTCRMK ANSPLSVKAF TRGPATATSK ATNVLVSSS
001: MATSIKSITL ALLIFSVLLI SLSLGSVTAT ETTRNEAEAR RMYERWLVEN RKNYNGLGEK ERRFEIFKDN LKFVEEHSSI PNRTYEVGLT RFADLTNDEF
101: RAIYLRSKME RTRVPVKGEK YLYKVGDSLP DAIDWRAKGA VNPVKDQGSC GSCWAFSAIG AVEGINQIKT GELISLSEQE LVDCDTSYND GCGGGLMDYA
201: FKFIIENGGI DTEEDYPYIA TDVNVCNSDK KNTRVVTIDG YEDVPQNDEK SLKKALANQP ISVAIEAGGR AFQLYTSGVF TGTCGTSLDH GVVAVGYGSE
301: GGQDYWIVRN SWGSNWGESG YFKLERNIKE SSGKCGVAMM ASYPTKSSGS NPPKPPAPSP VVCDKSNTCP AKSTCCCLYE YNGKCYSWGC CPYESATCCD
401: DGSSCCPQSY PVCDLKANTC RMKGNSPLSI KALTRGPAIA TTKSTNMLVG SA
101: RAIYLRSKME RTRVPVKGEK YLYKVGDSLP DAIDWRAKGA VNPVKDQGSC GSCWAFSAIG AVEGINQIKT GELISLSEQE LVDCDTSYND GCGGGLMDYA
201: FKFIIENGGI DTEEDYPYIA TDVNVCNSDK KNTRVVTIDG YEDVPQNDEK SLKKALANQP ISVAIEAGGR AFQLYTSGVF TGTCGTSLDH GVVAVGYGSE
301: GGQDYWIVRN SWGSNWGESG YFKLERNIKE SSGKCGVAMM ASYPTKSSGS NPPKPPAPSP VVCDKSNTCP AKSTCCCLYE YNGKCYSWGC CPYESATCCD
401: DGSSCCPQSY PVCDLKANTC RMKGNSPLSI KALTRGPAIA TTKSTNMLVG SA
Arabidopsis Description
RD21CProbable cysteine protease RD21C [Source:UniProtKB/Swiss-Prot;Acc:Q9LT78]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.